Cow genome map


           Conread name:
           Ss1.1-Mixn-0005c15.5
        

               Conread position:
               1995-2176
               

               Cow position:
               chr25:11258985-11259169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 63
               

               Conread position:
               2038-2331
               

               Cow position:
               chr25:6260626-6260905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               2041-2658
               

               Cow position:
               chr25:8547110-8547767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 146
               

               Conread position:
               2054-2572
               

               Cow position:
               chr25:14268885-14269400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               2066-2331
               

               Cow position:
               chr25:30069038-30069305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               2119-2662
               

               Cow position:
               chr25:11487378-11486832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               357
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               2246-2615
               

               Cow position:
               chr25:11409121-11408744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               100, 257
               

               Conread position:
               2343-2653
               

               Cow position:
               chr25:17630690-17630390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               2373-2651
               

               Cow position:
               chr25:23205406-23205672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               224, 78
               

               Conread position:
               2492-2636
               

               Cow position:
               chr25:12142648-12142789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               
Show alignments to all cow chromosomes.