Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1705-2088 |
| Cow position: | chr28:12082175-12082563 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1995-2176 |
| Cow position: | chr28:29405943-29406135 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1995-2318 |
| Cow position: | chr28:11097561-11097260 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 2032-2176 |
| Cow position: | chr28:23011558-23011412 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 2041-2229 |
| Cow position: | chr28:22835162-22834965 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 156 |
| Conread position: | 2041-2283 |
| Cow position: | chr28:4133774-4133542 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 2203-2661 |
| Cow position: | chr28:22193376-22192925 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 2207-2658 |
| Cow position: | chr28:11209758-11209292 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 6, 18 |
| Conread position: | 2217-2662 |
| Cow position: | chr28:1435022-1435470 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 179 |
| Conread position: | 2230-2634 |
| Cow position: | chr28:5138112-5137708 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 2340-2676 |
| Cow position: | chr28:13773241-13773565 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 2345-2623 |
| Cow position: | chr28:23011288-23011009 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 2346-2663 |
| Cow position: | chr28:8124139-8124454 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 150 |
| Conread position: | 2361-2635 |
| Cow position: | chr28:22833747-22833474 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 2408-2568 |
| Cow position: | chr28:11855863-11855701 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 2415-2634 |
| Cow position: | chr28:23605613-23605833 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 2418-2653 |
| Cow position: | chr28:12082761-12082997 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 2435-2670 |
| Cow position: | chr28:742976-742749 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 2492-2670 |
| Cow position: | chr28:29952773-29952599 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 90 |
Show alignments to all cow chromosomes.