Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1615-2370 |
| Cow position: | chr6:58916023-58916769 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 1989-2659 |
| Cow position: | chr6:21411143-21410507 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 1996-2599 |
| Cow position: | chr6:22172215-22171628 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 2030-2468 |
| Cow position: | chr6:54431563-54431119 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 2036-2250 |
| Cow position: | chr6:28429471-28429686 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 133 |
| Conread position: | 2037-2661 |
| Cow position: | chr6:6379720-6380365 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 2041-2248 |
| Cow position: | chr6:2870068-2869859 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 149 |
| Conread position: | 2041-2330 |
| Cow position: | chr6:6812668-6812381 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 2041-2442 |
| Cow position: | chr6:61432764-61432345 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 2041-2457 |
| Cow position: | chr6:8136512-8136113 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 39, 124 |
| Conread position: | 2052-2654 |
| Cow position: | chr6:1630074-1629478 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 2083-2662 |
| Cow position: | chr6:57965401-57964816 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 2091-2650 |
| Cow position: | chr6:34023244-34023806 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 2175-2662 |
| Cow position: | chr6:35548528-35548997 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 94 |
| Conread position: | 2259-2662 |
| Cow position: | chr6:432828-432428 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 2343-2662 |
| Cow position: | chr6:6812211-6811899 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 108, 52 |
| Conread position: | 2345-2662 |
| Cow position: | chr6:43633647-43633337 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 8, 13 |
Show alignments to all cow chromosomes.