Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1992-2549 |
| Cow position: | chr7:40256566-40256011 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 1995-2331 |
| Cow position: | chr7:38207447-38207753 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 87, 147 |
| Conread position: | 1996-2617 |
| Cow position: | chr7:25126823-25127441 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 1999-2176 |
| Cow position: | chr7:36819721-36819902 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 125 |
| Conread position: | 2006-2329 |
| Cow position: | chr7:21994255-21993928 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 2019-2174 |
| Cow position: | chr7:12537628-12537470 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 2036-2322 |
| Cow position: | chr7:10035012-10035287 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 2038-2331 |
| Cow position: | chr7:49094316-49094035 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 152 |
| Conread position: | 2041-2329 |
| Cow position: | chr7:907421-907714 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 2041-2657 |
| Cow position: | chr7:4722884-4722269 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 414 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 2041-2662 |
| Cow position: | chr7:2270612-2269992 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 2083-2670 |
| Cow position: | chr7:28894624-28895196 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 373 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 2096-2662 |
| Cow position: | chr7:55697444-55696901 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 361 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 2101-2680 |
| Cow position: | chr7:23456498-23455939 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 388 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 2121-2670 |
| Cow position: | chr7:14869566-14869021 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 381 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 2190-2663 |
| Cow position: | chr7:38094970-38094494 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 2190-2670 |
| Cow position: | chr7:49211524-49211992 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 2240-2598 |
| Cow position: | chr7:36819905-36820264 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 2265-2662 |
| Cow position: | chr7:11431338-11430952 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 2333-2634 |
| Cow position: | chr7:45598376-45598071 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 2409-2662 |
| Cow position: | chr7:6008595-6008344 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 2438-2663 |
| Cow position: | chr7:40708591-40708818 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 57 |
Show alignments to all cow chromosomes.