Cow genome map


           Conread name:
           Ss1.1-Mixn-0008k02.5
        

               Conread position:
               5-509
               

               Cow position:
               chr9:28563560-28564066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 97
               

               Conread position:
               521-682
               

               Cow position:
               chr9:28568231-28568390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               681-793
               

               Cow position:
               chr9:28568805-28568917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               110
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               792-897
               

               Cow position:
               chr9:28569543-28569648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               895-1024
               

               Cow position:
               chr9:28571698-28571827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               127
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1019-2667
               

               Cow position:
               chr9:28572756-28574414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1668
               

               Alignm identity:
               1596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               450, 184
               

               Conread position:
               2096-2632
               

               Cow position:
               chr9:63058478-63059016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 111
               
Show alignments to all cow chromosomes.