Cow genome map


           Conread name:
           Ss1.1-Mixn-0011o13.5
        

               Conread position:
               17-196
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               17-207
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               17-255
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               30-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               115, 162
               

               Conread position:
               35-254
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 129
               

               Conread position:
               38-251
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 175
               

               Conread position:
               42-250
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               6, 170
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 173
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               6, 153
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 177
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               6, 174
               

               Conread position:
               42-256
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               103, 174
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 179
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 173
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               6, 173
               

               Conread position:
               43-208
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               102, 63
               

               Conread position:
               43-225
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 172
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               43-258
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               101, 174
               

               Conread position:
               43-258
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 167
               

               Conread position:
               45-209
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               45-251
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-251
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 100
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               47-255
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               47-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 173
               

               Conread position:
               52-251
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               54-256
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               54-258
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               56-251
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               56-253
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               56-253
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 154
               

               Conread position:
               56-255
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 164
               

               Conread position:
               56-255
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 173
               

               Conread position:
               59-251
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 134
               

               Conread position:
               59-251
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               59-257
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 133
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               60-250
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 158
               

               Conread position:
               60-255
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               61-214
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 124
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               61-255
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               83, 13
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               83, 156
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               62-255
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               62-258
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               72-251
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               72-253
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               72-256
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 144
               

               Conread position:
               72-258
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 144
               

               Conread position:
               73-255
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               75-255
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               78-256
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 139
               

               Conread position:
               83-253
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 133
               

               Conread position:
               84-255
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               86-258
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               97-251
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 112
               

               Conread position:
               98-253
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               46, 119
               

               Conread position:
               117-258
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               120-258
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               143-258
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 72
               
Show alignments to all cow chromosomes.