Cow genome map

Conread name: Ss1.1-Mixn-0011o13.5

Conread position: 11-256
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 208

Conread position: 16-253
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 35

Conread position: 17-251
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 7

Conread position: 17-258
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 56, 7

Conread position: 18-248
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 6

Conread position: 21-252
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 19

Conread position: 23-255
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 52, 8

Conread position: 24-258
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 0

Conread position: 26-251
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 5, 194

Conread position: 26-251
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 83

Conread position: 28-258
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 187

Conread position: 29-256
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 190

Conread position: 32-251
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 10

Conread position: 32-258
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 169

Conread position: 33-250
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 120

Conread position: 34-247
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 24

Conread position: 39-254
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 34, 179

Conread position: 40-197
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 40-251
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 18

Conread position: 40-253
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 147

Conread position: 40-255
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 22

Conread position: 41-251
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 47

Conread position: 41-258
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 178

Conread position: 42-249
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 173

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 65

Conread position: 42-251
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 8

Conread position: 42-251
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 68

Conread position: 42-251
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 171

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 175

Conread position: 42-251
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 32

Conread position: 42-251
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 86

Conread position: 42-253
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 7, 173

Conread position: 42-253
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 177

Conread position: 42-253
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 42-253
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 179

Conread position: 42-255
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 104

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 67

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 182

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 8, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 177

Conread position: 42-258
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 184

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 177

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 178

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 220
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 6

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 176

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 8, 177

Conread position: 43-212
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 66

Conread position: 43-247
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 163

Conread position: 43-253
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 5, 177

Conread position: 43-255
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 6, 139

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 5, 176

Conread position: 43-258
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 176

Conread position: 44-251
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 7

Conread position: 45-249
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 91

Conread position: 45-251
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 167

Conread position: 45-251
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 46-247
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 27, 168

Conread position: 47-243
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 172

Conread position: 47-258
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 74

Conread position: 50-251
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 169

Conread position: 50-258
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 52-250
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 146

Conread position: 52-255
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 114

Conread position: 54-251
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 79

Conread position: 54-251
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 18

Conread position: 54-251
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 161

Conread position: 54-251
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 164

Conread position: 54-251
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 64

Conread position: 54-255
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 164

Conread position: 54-257
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 167

Conread position: 54-258
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 164

Conread position: 56-251
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 16

Conread position: 59-251
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 159

Conread position: 59-255
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 163

Conread position: 59-258
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 159

Conread position: 59-258
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 158

Conread position: 60-255
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 158

Conread position: 60-255
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 150

Conread position: 61-249
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 91

Conread position: 61-251
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 61-252
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 158

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 106

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 155

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 151

Conread position: 62-258
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 83, 57

Conread position: 62-258
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 68-251
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 153

Conread position: 69-255
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 83

Conread position: 72-207
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 119

Conread position: 72-253
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 112

Conread position: 72-255
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 161

Conread position: 72-258
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 63

Conread position: 76-251
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 51

Conread position: 98-251
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 113

Conread position: 98-251
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 119

Conread position: 118-253
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 74

Conread position: 120-251
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 92

Conread position: 120-251
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 96

Conread position: 120-258
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 77

Conread position: 125-253
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 87

Conread position: 131-258
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 85

Conread position: 132-253
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 143-251
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.