Cow genome map

Conread name: Ss1.1-Mixn-0011o13.5

Conread position: 15-255
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 26

Conread position: 17-253
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 7

Conread position: 18-255
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 77

Conread position: 18-258
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 178

Conread position: 18-258
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 24

Conread position: 20-258
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 197

Conread position: 24-258
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 91

Conread position: 26-255
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 195

Conread position: 26-258
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 194

Conread position: 29-251
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 9

Conread position: 30-255
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 7, 30

Conread position: 30-258
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 69

Conread position: 32-251
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 19

Conread position: 33-246
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 17

Conread position: 33-251
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 52

Conread position: 34-249
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 17

Conread position: 34-253
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 26

Conread position: 34-253
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 16

Conread position: 34-255
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 8

Conread position: 34-255
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 161

Conread position: 34-256
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 25

Conread position: 40-224
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 48

Conread position: 40-238
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 163

Conread position: 40-248
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 27

Conread position: 40-251
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 13

Conread position: 40-255
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 104, 46

Conread position: 40-255
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 134

Conread position: 42-180
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 42-232
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 135

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 6, 178

Conread position: 42-251
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 146

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 149

Conread position: 42-253
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 177

Conread position: 42-253
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 178

Conread position: 42-254
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 177

Conread position: 42-255
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 177

Conread position: 42-255
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 181

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 75

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 7, 171

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 78

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 146

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 69

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 158

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 176

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 8, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 177

Conread position: 43-241
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 172

Conread position: 43-251
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 148

Conread position: 43-251
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 5, 63

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 128

Conread position: 43-255
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 16

Conread position: 43-258
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 56

Conread position: 44-255
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 133

Conread position: 45-193
Cow position:
Alignm length: 150
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 152

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 100, 171

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 164

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 172

Conread position: 45-258
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 153

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 167

Conread position: 46-255
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 144

Conread position: 46-288
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 75

Conread position: 47-251
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 171

Conread position: 47-258
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 171

Conread position: 49-251
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 135

Conread position: 50-191
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 50-250
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 176

Conread position: 50-255
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 56

Conread position: 50-258
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 168

Conread position: 52-258
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 164

Conread position: 54-251
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 165

Conread position: 54-251
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 139

Conread position: 54-251
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 41

Conread position: 54-251
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 166

Conread position: 56-253
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 131

Conread position: 56-255
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 159

Conread position: 56-255
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 55

Conread position: 56-255
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 95

Conread position: 59-251
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 94

Conread position: 59-258
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 159

Conread position: 61-251
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 45

Conread position: 72-251
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 144

Conread position: 72-255
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 73, 146

Conread position: 72-255
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 144

Conread position: 72-256
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 144

Conread position: 72-258
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 119

Conread position: 72-258
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 73, 34

Conread position: 75-250
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 117

Conread position: 75-251
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 32

Conread position: 75-251
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 133

Conread position: 75-251
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 70, 142

Conread position: 75-253
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 70, 134

Conread position: 75-258
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 137

Conread position: 78-251
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 53

Conread position: 78-254
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 139

Conread position: 86-255
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 92

Conread position: 86-255
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 131

Conread position: 87-255
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 20

Conread position: 119-255
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 10

Conread position: 131-258
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 81

Conread position: 132-258
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 84

Conread position: 151-254
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.