Cow genome map


           Conread name:
           Ss1.1-Mixn-0011o13.5
        

               Conread position:
               18-251
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               18-255
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               27-258
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               6, 193
               

               Conread position:
               30-253
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               32-213
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               32-258
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 162
               

               Conread position:
               34-253
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               34-255
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 182
               

               Conread position:
               40-253
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               8, 179
               

               Conread position:
               40-255
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 159
               

               Conread position:
               42-206
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 60
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               6, 148
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               103, 74
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 166
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 177
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               8, 174
               

               Conread position:
               42-253
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-254
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               6, 85
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               6, 66
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               43-214
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               43-215
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 169
               

               Conread position:
               43-247
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               5, 177
               

               Conread position:
               43-253
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 168
               

               Conread position:
               43-254
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 7
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 176
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 176
               

               Conread position:
               45-249
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               55, 173
               

               Conread position:
               45-251
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               46-251
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               47-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               48-258
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               97, 164
               

               Conread position:
               50-251
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               50-251
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 67
               

               Conread position:
               50-258
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               52-228
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               52-249
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 151
               

               Conread position:
               52-251
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               52-258
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 160
               

               Conread position:
               53-255
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               54-250
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               54-251
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               54-252
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               54-288
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               54-302
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               59-251
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               59-253
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 160
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 151
               

               Conread position:
               61-255
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               84, 155
               

               Conread position:
               61-255
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               72-251
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 137
               

               Conread position:
               72-253
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 145
               

               Conread position:
               72-255
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               181, 10
               

               Conread position:
               72-258
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               75-258
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               76-258
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 136
               

               Conread position:
               85-253
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               96-258
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               103-255
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               125-251
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               143-255
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 72
               
Show alignments to all cow chromosomes.