Cow genome map


           Conread name:
           Ss1.1-Mixn-0011o13.5
        

               Conread position:
               18-251
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 167
               

               Conread position:
               24-213
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               27-258
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               31-251
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 99
               

               Conread position:
               33-251
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               33-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               37-258
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 178
               

               Conread position:
               40-251
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               40-251
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               40-255
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 80
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-253
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               103, 174
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 166
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               6, 152
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               7, 172
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               6, 173
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 104
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 186
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 173
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 151
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               8, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 177
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 133
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               5, 164
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 175
               

               Conread position:
               43-253
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               5, 135
               

               Conread position:
               45-251
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-254
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               97, 27
               

               Conread position:
               45-255
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 158
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               48-258
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 164
               

               Conread position:
               50-252
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 170
               

               Conread position:
               50-258
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               50-259
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               51-254
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 155
               

               Conread position:
               54-251
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 124
               

               Conread position:
               54-251
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 166
               

               Conread position:
               54-255
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               54-258
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               58-251
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               59-251
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               59-253
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 160
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 155
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 130
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               72-251
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               72-252
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 144
               

               Conread position:
               72-253
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               72-255
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 113
               

               Conread position:
               72-255
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               75-200
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               75-251
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               75-258
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 142
               

               Conread position:
               75-258
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 141
               

               Conread position:
               84-255
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               60, 132
               

               Conread position:
               84-258
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               61, 132
               

               Conread position:
               88-255
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               88-258
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               93-258
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               106-255
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               118-258
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               119-255
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               119-258
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               120-258
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               120-258
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               132-255
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               143-258
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               72, 0
               
Show alignments to all cow chromosomes.