Cow genome map

Conread name: Ss1.1-Mixn-0011o13.5

Conread position: 16-258
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 8

Conread position: 17-251
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 7

Conread position: 18-253
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 57, 47

Conread position: 26-251
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 59

Conread position: 29-238
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 190

Conread position: 30-251
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 96

Conread position: 32-258
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 183

Conread position: 33-258
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 186

Conread position: 34-247
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 17

Conread position: 34-251
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 137

Conread position: 34-252
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 24

Conread position: 39-251
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 39-255
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 69

Conread position: 40-251
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 178

Conread position: 40-251
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 75

Conread position: 40-251
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 184

Conread position: 40-251
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 181

Conread position: 40-253
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 175

Conread position: 40-253
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 55

Conread position: 40-255
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 78

Conread position: 40-255
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 51

Conread position: 41-254
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 182

Conread position: 42-225
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 29

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 13

Conread position: 42-251
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 178

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 177

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 173

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 173

Conread position: 42-251
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 52

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 177

Conread position: 42-253
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 176

Conread position: 42-255
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-255
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 177

Conread position: 42-255
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 66

Conread position: 42-255
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 148

Conread position: 42-255
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 178

Conread position: 42-255
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 6, 157

Conread position: 42-255
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 173

Conread position: 42-256
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 106

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 170

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 176

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 80

Conread position: 42-258
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 6, 180

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 178

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 170

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 176

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 169

Conread position: 42-301
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 13

Conread position: 43-251
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 7

Conread position: 43-251
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 45

Conread position: 43-253
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 5, 38

Conread position: 43-254
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 17

Conread position: 43-255
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 7

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 53

Conread position: 43-255
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 5, 178

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 176

Conread position: 43-255
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 177

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 5, 176

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 5, 17

Conread position: 43-258
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 5, 91

Conread position: 43-258
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 174

Conread position: 45-224
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 167

Conread position: 45-251
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 80

Conread position: 45-251
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 167

Conread position: 45-251
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 142

Conread position: 45-253
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 105, 48

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 167

Conread position: 46-255
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 47-213
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 47-219
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 47-258
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 172

Conread position: 48-254
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 11

Conread position: 50-255
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 143

Conread position: 56-252
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 96

Conread position: 56-255
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 162

Conread position: 59-253
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 62

Conread position: 59-253
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 163

Conread position: 59-255
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 84

Conread position: 60-258
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 67

Conread position: 61-255
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 83, 151

Conread position: 62-258
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 83, 150

Conread position: 66-248
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 152

Conread position: 67-209
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 72-251
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 144

Conread position: 72-253
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 144

Conread position: 72-258
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 144

Conread position: 73-258
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 71, 143

Conread position: 74-254
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 142

Conread position: 75-250
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 55

Conread position: 75-255
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 142

Conread position: 75-256
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 141

Conread position: 83-251
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 133

Conread position: 83-253
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 37

Conread position: 84-251
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 103

Conread position: 85-255
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 131

Conread position: 86-255
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 130

Conread position: 86-275
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 22

Conread position: 87-258
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 125

Conread position: 88-251
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 94

Conread position: 98-251
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 118

Conread position: 100-255
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 112

Conread position: 102-251
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 17

Conread position: 119-250
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 97

Conread position: 121-255
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 124-258
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 129, 17

Conread position: 127-258
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 85

Conread position: 143-258
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 68

Show alignments to all cow chromosomes.