Cow genome map

Conread name: Ss1.1-Mixn-0011o13.5

Conread position: 17-246
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 11

Conread position: 17-251
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 7

Conread position: 17-258
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 9

Conread position: 18-258
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 20

Conread position: 20-258
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 88

Conread position: 23-251
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 8

Conread position: 25-251
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 133

Conread position: 26-251
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 5, 194

Conread position: 30-247
Cow position:
Alignm length: 221
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 16

Conread position: 30-251
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 97

Conread position: 31-240
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 132

Conread position: 32-251
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 43, 96

Conread position: 32-251
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 175

Conread position: 32-254
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 187

Conread position: 33-251
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 186

Conread position: 33-258
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 111, 179

Conread position: 35-242
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 11

Conread position: 35-251
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 6, 116

Conread position: 35-251
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 40-233
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 140

Conread position: 40-251
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 182

Conread position: 40-251
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 33, 101

Conread position: 40-258
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 179

Conread position: 40-258
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 160

Conread position: 41-250
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 153

Conread position: 42-223
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 120

Conread position: 42-236
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 177

Conread position: 42-249
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 180

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 80

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 56

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 146

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 178

Conread position: 42-253
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 71

Conread position: 42-253
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 176

Conread position: 42-254
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 176

Conread position: 42-255
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 121

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 176

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 184

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 174

Conread position: 42-258
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 71

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 103, 170

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 118

Conread position: 42-258
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 171

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 67

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 6, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 90

Conread position: 43-251
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 176

Conread position: 43-251
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 170

Conread position: 43-251
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 5, 99

Conread position: 43-253
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 179

Conread position: 43-256
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 106

Conread position: 43-258
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 169

Conread position: 45-253
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 171

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 183

Conread position: 45-258
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 100, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 167

Conread position: 46-236
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 158

Conread position: 46-251
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 143

Conread position: 47-251
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 173

Conread position: 47-258
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 39

Conread position: 47-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 159

Conread position: 48-255
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 14

Conread position: 50-253
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 97

Conread position: 50-255
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 71

Conread position: 51-251
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 167

Conread position: 52-258
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 74

Conread position: 53-255
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 169

Conread position: 54-251
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 43

Conread position: 54-251
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 54-254
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 44

Conread position: 54-258
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 164

Conread position: 56-255
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 118

Conread position: 56-255
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 164

Conread position: 57-251
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 15, 161

Conread position: 59-251
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 159

Conread position: 59-251
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 135

Conread position: 59-253
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 49

Conread position: 59-263
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 161

Conread position: 60-258
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 35

Conread position: 61-251
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 155

Conread position: 61-251
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 155

Conread position: 61-251
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 151

Conread position: 61-253
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 151

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 151

Conread position: 61-301
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 157

Conread position: 62-255
Cow position:
Alignm length: 198
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 58

Conread position: 71-258
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 72-249
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 145

Conread position: 72-251
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 102

Conread position: 72-251
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 145

Conread position: 72-253
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 71

Conread position: 72-255
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 140

Conread position: 72-258
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 145

Conread position: 72-258
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 125

Conread position: 75-251
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 82

Conread position: 84-258
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 169, 131

Conread position: 84-258
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 169, 131

Conread position: 84-258
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 132

Conread position: 86-251
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 130

Conread position: 89-250
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 32

Conread position: 93-245
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 123

Conread position: 97-258
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 119

Conread position: 114-251
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 102

Conread position: 120-249
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 71

Conread position: 127-251
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 85

Show alignments to all cow chromosomes.