Cow genome map


           Conread name:
           Ss1.1-Mixn-0011o13.5
        

               Conread position:
               15-196
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               16-253
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               18-252
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               27-258
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 93
               

               Conread position:
               29-251
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 178
               

               Conread position:
               29-258
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               30-253
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               114, 15
               

               Conread position:
               32-220
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               32-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               32-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               32-251
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               33-251
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               33-251
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               33-258
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               111, 179
               

               Conread position:
               34-209
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               36-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               5, 186
               

               Conread position:
               40-247
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 175
               

               Conread position:
               40-251
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               40-253
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               40-253
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 178
               

               Conread position:
               40-255
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 125
               

               Conread position:
               42-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               42-252
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 42
               

               Conread position:
               42-252
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-253
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 173
               

               Conread position:
               42-253
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 80
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               7, 177
               

               Conread position:
               42-255
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 180
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               6, 173
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 164
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               31, 175
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               42-258
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               5, 176
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               5, 178
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 54
               

               Conread position:
               43-258
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 177
               

               Conread position:
               43-258
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               103, 169
               

               Conread position:
               45-251
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-251
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-253
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               45-253
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-253
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               100, 172
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 165
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               45-258
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               99, 167
               

               Conread position:
               46-253
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 154
               

               Conread position:
               47-231
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 172
               

               Conread position:
               47-251
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               50-251
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               50-258
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 168
               

               Conread position:
               51-251
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               51-251
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 44
               

               Conread position:
               52-251
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               52-257
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               24, 136
               

               Conread position:
               54-231
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 165
               

               Conread position:
               54-253
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               54-255
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               54-255
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               54-258
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               54-258
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               54-265
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               56-249
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               56-254
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               56-255
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               59-251
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               86, 157
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 159
               

               Conread position:
               59-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               14, 159
               

               Conread position:
               61-251
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 128
               

               Conread position:
               61-255
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 156
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 155
               

               Conread position:
               61-258
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 135
               

               Conread position:
               62-249
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               62-251
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               66-255
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 151
               

               Conread position:
               66-258
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               72-247
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 122
               

               Conread position:
               72-251
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               77, 144
               

               Conread position:
               72-254
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 144
               

               Conread position:
               75-258
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               85-212
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               86-258
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               58, 130
               

               Conread position:
               93-254
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               96-258
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 116
               

               Conread position:
               96-258
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               114-258
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 102
               

               Conread position:
               119-251
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               119-255
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               120-254
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               25, 96
               

               Conread position:
               122-251
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               125-256
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               132-255
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 80
               
Show alignments to all cow chromosomes.