Cow genome map
| Conread name: | Ss1.1-Mixn-0011o13.5 |
| Conread position: | 25-258 |
| Cow position: | chr26:6844828-6844591 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 195 |
| Conread position: | 29-258 |
| Cow position: | chr26:17394202-17393970 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 30-253 |
| Cow position: | chr26:35394374-35394157 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 34-253 |
| Cow position: | chr26:30625911-30625694 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 35-251 |
| Cow position: | chr26:23590359-23590571 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 109, 6 |
| Conread position: | 36-255 |
| Cow position: | chr26:2245514-2245290 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 40-257 |
| Cow position: | chr26:9841705-9841480 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 8, 150 |
| Conread position: | 42-246 |
| Cow position: | chr26:27987892-27987686 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 177 |
| Conread position: | 42-249 |
| Cow position: | chr26:4601486-4601282 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 42-251 |
| Cow position: | chr26:2201236-2201447 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 173 |
| Conread position: | 42-251 |
| Cow position: | chr26:4548312-4548521 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 121 |
| Conread position: | 42-258 |
| Cow position: | chr26:9114739-9114958 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 42-258 |
| Cow position: | chr26:9559175-9558960 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr26:13807324-13807105 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr26:14488551-14488333 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 6, 152 |
| Conread position: | 42-258 |
| Cow position: | chr26:17326864-17327083 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr26:18856823-18857043 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 42-258 |
| Cow position: | chr26:19348792-19348573 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 6, 80 |
| Conread position: | 42-258 |
| Cow position: | chr26:23889114-23889331 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 130 |
| Conread position: | 42-258 |
| Cow position: | chr26:35423202-35423418 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 164 |
| Conread position: | 43-253 |
| Cow position: | chr26:31139571-31139358 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 5, 178 |
| Conread position: | 43-255 |
| Cow position: | chr26:6320814-6321025 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 5, 176 |
| Conread position: | 45-251 |
| Cow position: | chr26:2417687-2417482 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-251 |
| Cow position: | chr26:28707351-28707145 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:1638326-1638115 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 45-258 |
| Cow position: | chr26:2349463-2349250 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:3027909-3027696 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:4122376-4122589 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:4441130-4441343 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:18781831-18781618 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:18804655-18804442 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:34264673-34264885 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 45-258 |
| Cow position: | chr26:34271779-34271992 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 100, 171 |
| Conread position: | 45-258 |
| Cow position: | chr26:35122534-35122320 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr26:35561919-35562132 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 46-233 |
| Cow position: | chr26:34824211-34824020 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 145 |
| Conread position: | 47-251 |
| Cow position: | chr26:6793117-6793323 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 172 |
| Conread position: | 50-255 |
| Cow position: | chr26:8654614-8654410 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 50-256 |
| Cow position: | chr26:3705352-3705565 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 52-255 |
| Cow position: | chr26:2605219-2605014 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 52-255 |
| Cow position: | chr26:3905965-3906169 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 166 |
| Conread position: | 54-251 |
| Cow position: | chr26:8087785-8087983 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 22, 164 |
| Conread position: | 54-254 |
| Cow position: | chr26:12668167-12668371 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 56-255 |
| Cow position: | chr26:18035620-18035822 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 59-253 |
| Cow position: | chr26:21011861-21012050 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 60-213 |
| Cow position: | chr26:13771987-13771829 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 61-250 |
| Cow position: | chr26:1347258-1347070 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 61-258 |
| Cow position: | chr26:367356-367553 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 61-258 |
| Cow position: | chr26:2671050-2670853 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 61-258 |
| Cow position: | chr26:4729599-4729402 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 72-251 |
| Cow position: | chr26:1884090-1883912 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 146 |
| Conread position: | 84-258 |
| Cow position: | chr26:14896749-14896922 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 132 |
| Conread position: | 84-258 |
| Cow position: | chr26:30586598-30586424 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 87-258 |
| Cow position: | chr26:21535112-21535283 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 129 |
| Conread position: | 120-258 |
| Cow position: | chr26:17429692-17429554 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 96 |
Show alignments to all cow chromosomes.