Cow genome map

Conread name: Ss1.1-Mixn-0011o13.5

Conread position: 1-254
Cow position:
Alignm length: 268
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 224

Conread position: 17-253
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 7

Conread position: 17-254
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 35

Conread position: 17-255
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 9

Conread position: 17-255
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 33, 7

Conread position: 17-258
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 7

Conread position: 26-251
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 5, 177

Conread position: 26-255
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 194

Conread position: 26-258
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 7, 194

Conread position: 26-258
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 188

Conread position: 27-251
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 21

Conread position: 27-251
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 10

Conread position: 27-258
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 192

Conread position: 29-251
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 141

Conread position: 32-198
Cow position:
Alignm length: 168
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 20

Conread position: 32-251
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 113, 13

Conread position: 33-253
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 99

Conread position: 34-251
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 147

Conread position: 40-253
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 61

Conread position: 40-255
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 16

Conread position: 40-255
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 141

Conread position: 40-258
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 180

Conread position: 40-258
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 179

Conread position: 42-246
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 172

Conread position: 42-247
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 31, 91

Conread position: 42-250
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 33

Conread position: 42-250
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 42-251
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 173

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 177

Conread position: 42-251
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 48

Conread position: 42-251
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 173

Conread position: 42-251
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 178

Conread position: 42-255
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 177

Conread position: 42-255
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 143

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 57

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 14

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 67

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 176

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 178

Conread position: 42-258
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 179

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 178

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 73

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 117

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 177

Conread position: 42-258
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 178

Conread position: 42-258
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 177

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 177

Conread position: 42-258
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 176

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 7, 173

Conread position: 42-258
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 173

Conread position: 43-250
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 5, 144

Conread position: 43-251
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 5, 177

Conread position: 43-251
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 5, 33

Conread position: 43-251
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 169

Conread position: 43-255
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 165

Conread position: 43-255
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 5, 145

Conread position: 43-255
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 6, 177

Conread position: 43-288
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 121

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 73

Conread position: 45-258
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 167

Conread position: 45-258
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 167

Conread position: 45-262
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 100, 169

Conread position: 46-258
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 147

Conread position: 48-258
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 164

Conread position: 50-251
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 101

Conread position: 51-255
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 166

Conread position: 52-250
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 153

Conread position: 52-258
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 167

Conread position: 54-237
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 67

Conread position: 54-251
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 79

Conread position: 54-255
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 164

Conread position: 54-256
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 88

Conread position: 54-258
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 164

Conread position: 54-258
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 48

Conread position: 56-253
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 162

Conread position: 56-255
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 159

Conread position: 59-255
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 159

Conread position: 59-258
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 159

Conread position: 61-251
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 157

Conread position: 61-251
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 152

Conread position: 61-258
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 108

Conread position: 61-258
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 155

Conread position: 61-288
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 136

Conread position: 62-225
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 156

Conread position: 62-251
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 118

Conread position: 62-255
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 157

Conread position: 62-258
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 150

Conread position: 72-251
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 108

Conread position: 72-253
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 146

Conread position: 73-258
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 114

Conread position: 74-250
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 142

Conread position: 75-258
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 141

Conread position: 84-258
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 35

Conread position: 86-255
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 20

Conread position: 86-255
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 123

Conread position: 89-243
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 114-253
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 102

Conread position: 114-258
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 98

Conread position: 119-258
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 93

Conread position: 120-253
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 97

Conread position: 123-258
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 89

Conread position: 140-258
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 71

Conread position: 144-254
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.