Cow genome map
| Conread name: | Ss1.1-Mixn-0011o13.5 |
| Conread position: | 8-252 |
| Cow position: | chr9:4306540-4306296 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 12-258 |
| Cow position: | chr9:2173072-2173316 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 133, 60 |
| Conread position: | 13-255 |
| Cow position: | chr9:3074709-3074939 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 240, 27 |
| Conread position: | 15-208 |
| Cow position: | chr9:20577381-20577573 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 17-251 |
| Cow position: | chr9:27098882-27099109 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 17-251 |
| Cow position: | chr9:29788116-29787886 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 17-251 |
| Cow position: | chr9:60460941-60460714 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 26-251 |
| Cow position: | chr9:649505-649278 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 5, 35 |
| Conread position: | 26-251 |
| Cow position: | chr9:5534388-5534160 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 5, 194 |
| Conread position: | 26-255 |
| Cow position: | chr9:20941001-20941232 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 5, 111 |
| Conread position: | 26-258 |
| Cow position: | chr9:48795748-48795512 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 5, 194 |
| Conread position: | 27-254 |
| Cow position: | chr9:3061137-3061366 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 188 |
| Conread position: | 28-258 |
| Cow position: | chr9:2681122-2681355 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 20, 193 |
| Conread position: | 29-258 |
| Cow position: | chr9:128303-128071 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 30-258 |
| Cow position: | chr9:27782341-27782110 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 189 |
| Conread position: | 32-251 |
| Cow position: | chr9:10567814-10567591 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 18, 189 |
| Conread position: | 32-251 |
| Cow position: | chr9:42902884-42902667 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 32-251 |
| Cow position: | chr9:56745443-56745219 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 32-255 |
| Cow position: | chr9:64012678-64012452 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 183 |
| Conread position: | 32-258 |
| Cow position: | chr9:1991984-1991755 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 16, 187 |
| Conread position: | 32-258 |
| Cow position: | chr9:2213693-2213927 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 32-258 |
| Cow position: | chr9:18507275-18507044 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 190 |
| Conread position: | 32-258 |
| Cow position: | chr9:18539215-18539445 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 188 |
| Conread position: | 33-251 |
| Cow position: | chr9:8404970-8405189 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 186 |
| Conread position: | 33-251 |
| Cow position: | chr9:24979110-24978892 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 36-258 |
| Cow position: | chr9:14766617-14766843 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 185 |
| Conread position: | 39-251 |
| Cow position: | chr9:34695805-34696017 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 40-213 |
| Cow position: | chr9:11504233-11504408 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 40-251 |
| Cow position: | chr9:791752-791543 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 40-251 |
| Cow position: | chr9:2526848-2527060 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 9, 148 |
| Conread position: | 40-253 |
| Cow position: | chr9:15986604-15986825 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 40-254 |
| Cow position: | chr9:16516322-16516531 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 40-255 |
| Cow position: | chr9:38678688-38678905 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 179 |
| Conread position: | 42-250 |
| Cow position: | chr9:16178156-16178365 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-251 |
| Cow position: | chr9:3311180-3311392 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 178 |
| Conread position: | 42-251 |
| Cow position: | chr9:4940938-4940726 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 173 |
| Conread position: | 42-251 |
| Cow position: | chr9:5526057-5525847 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 42-251 |
| Cow position: | chr9:17301569-17301360 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 6, 151 |
| Conread position: | 42-251 |
| Cow position: | chr9:17303411-17303200 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-251 |
| Cow position: | chr9:17633039-17633253 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 121 |
| Conread position: | 42-251 |
| Cow position: | chr9:26569826-26570034 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 42-251 |
| Cow position: | chr9:30140026-30139825 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 42-251 |
| Cow position: | chr9:34240538-34240327 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 42-251 |
| Cow position: | chr9:59196416-59196629 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 6, 179 |
| Conread position: | 42-253 |
| Cow position: | chr9:8952468-8952263 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 42-254 |
| Cow position: | chr9:20780455-20780667 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 42-255 |
| Cow position: | chr9:3797729-3797519 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 6, 72 |
| Conread position: | 42-255 |
| Cow position: | chr9:6765210-6764995 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-255 |
| Cow position: | chr9:34946462-34946245 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 8, 178 |
| Conread position: | 42-258 |
| Cow position: | chr9:1063139-1062915 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 42-258 |
| Cow position: | chr9:1099155-1099374 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 42-258 |
| Cow position: | chr9:2806795-2806582 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 42-258 |
| Cow position: | chr9:2835433-2835215 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 122 |
| Conread position: | 42-258 |
| Cow position: | chr9:3545390-3545607 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 176 |
| Conread position: | 42-258 |
| Cow position: | chr9:5627380-5627599 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 6, 166 |
| Conread position: | 42-258 |
| Cow position: | chr9:6708358-6708137 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 42-258 |
| Cow position: | chr9:9015636-9015854 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 176 |
| Conread position: | 42-258 |
| Cow position: | chr9:10856581-10856800 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr9:10939286-10939504 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 42-258 |
| Cow position: | chr9:15053321-15053100 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 42-258 |
| Cow position: | chr9:17017313-17017534 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 42-258 |
| Cow position: | chr9:21411873-21412092 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 177 |
| Conread position: | 42-258 |
| Cow position: | chr9:22655375-22655593 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 42-258 |
| Cow position: | chr9:26277219-26277434 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 42-258 |
| Cow position: | chr9:28658488-28658269 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr9:30674632-30674855 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 6, 181 |
| Conread position: | 42-258 |
| Cow position: | chr9:37159049-37158830 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr9:44168151-44168370 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 173 |
| Conread position: | 42-258 |
| Cow position: | chr9:45876081-45876300 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 179 |
| Conread position: | 42-258 |
| Cow position: | chr9:46668237-46668020 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 42-258 |
| Cow position: | chr9:47170607-47170827 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 177 |
| Conread position: | 42-258 |
| Cow position: | chr9:59480287-59480068 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 176 |
| Conread position: | 43-251 |
| Cow position: | chr9:3389232-3389026 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 154 |
| Conread position: | 43-251 |
| Cow position: | chr9:33068926-33068719 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 43-251 |
| Cow position: | chr9:53530285-53530495 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 171 |
| Conread position: | 43-252 |
| Cow position: | chr9:10110210-10110412 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 41 |
| Conread position: | 43-252 |
| Cow position: | chr9:26088433-26088229 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 43-255 |
| Cow position: | chr9:23421152-23421367 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 169 |
| Conread position: | 43-255 |
| Cow position: | chr9:36485070-36484857 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 5, 125 |
| Conread position: | 43-258 |
| Cow position: | chr9:31417939-31417724 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 101, 169 |
| Conread position: | 45-199 |
| Cow position: | chr9:37175372-37175527 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 45-251 |
| Cow position: | chr9:35543961-35543756 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-251 |
| Cow position: | chr9:50326412-50326621 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 45-258 |
| Cow position: | chr9:1071718-1071504 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 100, 171 |
| Conread position: | 45-258 |
| Cow position: | chr9:1249430-1249217 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:5430034-5430247 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:5453073-5452860 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:6549744-6549957 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:14002607-14002820 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:41507279-41507066 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:50840000-50840213 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:52525725-52525931 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 167 |
| Conread position: | 45-258 |
| Cow position: | chr9:56176338-56176550 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 46-248 |
| Cow position: | chr9:35593526-35593324 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 47-225 |
| Cow position: | chr9:18569966-18569788 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 47-251 |
| Cow position: | chr9:5516763-5516962 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 47-251 |
| Cow position: | chr9:19078226-19078419 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 48-250 |
| Cow position: | chr9:16821579-16821377 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 165 |
| Conread position: | 48-251 |
| Cow position: | chr9:43493514-43493716 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 96, 164 |
| Conread position: | 48-251 |
| Cow position: | chr9:43495704-43495906 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 96, 164 |
| Conread position: | 48-255 |
| Cow position: | chr9:3729619-3729826 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 48-258 |
| Cow position: | chr9:1000035-1000245 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 96, 169 |
| Conread position: | 50-251 |
| Cow position: | chr9:14794428-14794625 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 50-251 |
| Cow position: | chr9:22320138-22319933 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 171 |
| Conread position: | 50-251 |
| Cow position: | chr9:22442059-22442262 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 180 |
| Conread position: | 50-251 |
| Cow position: | chr9:27897584-27897782 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 50-258 |
| Cow position: | chr9:27037678-27037888 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 168 |
| Conread position: | 51-241 |
| Cow position: | chr9:26280416-26280610 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 51-250 |
| Cow position: | chr9:5328794-5328602 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 51-251 |
| Cow position: | chr9:60784401-60784602 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 167 |
| Conread position: | 51-253 |
| Cow position: | chr9:52722986-52723180 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 51-255 |
| Cow position: | chr9:35747308-35747107 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 135 |
| Conread position: | 52-258 |
| Cow position: | chr9:7059488-7059282 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 92, 164 |
| Conread position: | 54-248 |
| Cow position: | chr9:26054622-26054815 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 54-251 |
| Cow position: | chr9:18108996-18109194 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 54-251 |
| Cow position: | chr9:52408747-52408546 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 54-254 |
| Cow position: | chr9:29337339-29337536 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 54-255 |
| Cow position: | chr9:9198678-9198881 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 54-255 |
| Cow position: | chr9:21461059-21461261 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 56-215 |
| Cow position: | chr9:1639317-1639485 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 56-253 |
| Cow position: | chr9:37067423-37067622 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 56-253 |
| Cow position: | chr9:64026236-64026038 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 162 |
| Conread position: | 56-254 |
| Cow position: | chr9:1309281-1309475 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 56-255 |
| Cow position: | chr9:3576694-3576495 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 56-255 |
| Cow position: | chr9:51591205-51591404 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 56-255 |
| Cow position: | chr9:54995223-54995419 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 58-258 |
| Cow position: | chr9:3998181-3997978 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 160 |
| Conread position: | 59-251 |
| Cow position: | chr9:3806176-3806370 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 59-253 |
| Cow position: | chr9:31113733-31113933 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 163 |
| Conread position: | 59-255 |
| Cow position: | chr9:3412338-3412140 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 59-255 |
| Cow position: | chr9:19156705-19156507 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 59-255 |
| Cow position: | chr9:27291382-27291184 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 154 |
| Conread position: | 59-258 |
| Cow position: | chr9:778235-778034 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 59-258 |
| Cow position: | chr9:47005322-47005521 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 59-258 |
| Cow position: | chr9:51179322-51179121 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 60-254 |
| Cow position: | chr9:8738916-8738723 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 61-237 |
| Cow position: | chr9:18427943-18427768 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 61-255 |
| Cow position: | chr9:46626896-46627090 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 61-258 |
| Cow position: | chr9:218531-218335 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 61-258 |
| Cow position: | chr9:2873057-2873254 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 155 |
| Conread position: | 61-258 |
| Cow position: | chr9:6886174-6886372 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 89, 157 |
| Conread position: | 61-258 |
| Cow position: | chr9:10644055-10643858 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 61-258 |
| Cow position: | chr9:28680783-28680980 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 147 |
| Conread position: | 61-258 |
| Cow position: | chr9:44203486-44203289 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 61-258 |
| Cow position: | chr9:54459918-54459721 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 72-254 |
| Cow position: | chr9:25976124-25976305 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 145 |
| Conread position: | 72-255 |
| Cow position: | chr9:59508579-59508396 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 145 |
| Conread position: | 72-255 |
| Cow position: | chr9:62444379-62444197 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 72-258 |
| Cow position: | chr9:7104637-7104451 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 140 |
| Conread position: | 72-258 |
| Cow position: | chr9:28024409-28024599 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 130 |
| Conread position: | 72-258 |
| Cow position: | chr9:59538737-59538922 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 181, 143 |
| Conread position: | 75-253 |
| Cow position: | chr9:49283441-49283617 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 112 |
| Conread position: | 75-259 |
| Cow position: | chr9:26081719-26081538 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 77-251 |
| Cow position: | chr9:1998697-1998523 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 77-254 |
| Cow position: | chr9:2222529-2222354 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 78-251 |
| Cow position: | chr9:36845322-36845152 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 109 |
| Conread position: | 84-258 |
| Cow position: | chr9:7005325-7005499 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 91-251 |
| Cow position: | chr9:9958566-9958408 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 93-254 |
| Cow position: | chr9:29301352-29301194 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 105 |
| Conread position: | 95-258 |
| Cow position: | chr9:40143736-40143574 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 106-251 |
| Cow position: | chr9:31093286-31093146 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 120-258 |
| Cow position: | chr9:42569858-42569996 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 124-255 |
| Cow position: | chr9:40953-40824 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 44 |
Show alignments to all cow chromosomes.