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Cow genome map

           
Conread name:
           
Ss1.1-Mixn-0012m18.5
        

               
Conread position:
               
2-158
               

               
Cow position:
               
chr2:79404054-79404216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr2:23981548-23981717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 152
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr2:50580326-50580508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr2:41157931-41158133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr2:11599388-11599620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr2:58686889-58687133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr2:63051212-63050976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr2:4445843-4445689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr2:46312405-46312637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr2:23712839-23713071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr2:60368284-60368529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr2:31529460-31529683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr2:46164533-46164300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
7-135
               

               
Cow position:
               
chr2:70945373-70945505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
7-158
               

               
Cow position:
               
chr2:63331834-63331678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr2:14626562-14626790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr2:42608039-42608262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr2:49428350-49428583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
8-151
               

               
Cow position:
               
chr2:26102738-26102884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
8-184
               

               
Cow position:
               
chr2:19287111-19286936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
8-206
               

               
Cow position:
               
chr2:52466477-52466278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr2:38795791-38795586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
8-226
               

               
Cow position:
               
chr2:50766444-50766662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr2:74249258-74249027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr2:38886669-38886443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 139
               

               
Conread position:
               
9-157
               

               
Cow position:
               
chr2:43123310-43123462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
9-160
               

               
Cow position:
               
chr2:60429251-60429406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
9-161
               

               
Cow position:
               
chr2:30642692-30642536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
9-169
               

               
Cow position:
               
chr2:39597937-39598098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
9-169
               

               
Cow position:
               
chr2:43596184-43596019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 134
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr2:31673233-31673444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr2:18236269-18236053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr2:45367273-45367465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr2:63074881-63074678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 154
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr2:78360381-78360596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 166
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr2:46379122-46378919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
202, 117
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr2:45542429-45542213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 155
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr2:69250693-69250478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr2:42255406-42255623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 152
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr2:54790252-54790475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr2:1303921-1304145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 205
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr2:21003142-21003365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr2:10628563-10628333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr2:27337802-27337579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr2:47978073-47977844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 213
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr2:37614913-37615143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 122
               

               
Conread position:
               
10-149
               

               
Cow position:
               
chr2:70495246-70495383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr2:28303292-28303438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
10-161
               

               
Cow position:
               
chr2:38273523-38273677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
10-161
               

               
Cow position:
               
chr2:62644560-62644719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
10-188
               

               
Cow position:
               
chr2:31499971-31500157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr2:4016868-4016688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr2:20900489-20900297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr2:41710837-41711034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr2:45535439-45535651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr2:10439812-10440014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 130
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr2:43835587-43835374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr2:14349740-14349974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr2:15674516-15674725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr2:13317554-13317781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr2:22677165-22677392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr2:37347758-37347981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 161
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr2:42183345-42183562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr2:56350944-56350715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:994392-994173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:18997693-18997915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:36077326-36077559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:40373425-40373208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
191, 149
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:41019239-41019018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:41452205-41452432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:43474148-43474379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:44197854-44198079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:44620559-44620787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:47753635-47753397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:60091460-60091237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:62744034-62743811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:65036308-65036095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr2:70908352-70908134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr2:46343171-46342948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
11-147
               

               
Cow position:
               
chr2:13604443-13604582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-153
               

               
Cow position:
               
chr2:32416887-32416741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
11-158
               

               
Cow position:
               
chr2:34918106-34918255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
11-158
               

               
Cow position:
               
chr2:61485597-61485746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 104
               

               
Conread position:
               
11-159
               

               
Cow position:
               
chr2:73353768-73353915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
11-161
               

               
Cow position:
               
chr2:44004931-44005082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr2:10790144-10790301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr2:46294072-46293921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr2:72407520-72407369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
11-168
               

               
Cow position:
               
chr2:7524158-7523998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-168
               

               
Cow position:
               
chr2:13645294-13645452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chr2:6901752-6901911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chr2:44216408-44216569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr2:45439413-45439574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr2:46971096-46971268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr2:84970740-84970572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
11-176
               

               
Cow position:
               
chr2:6697521-6697359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
11-176
               

               
Cow position:
               
chr2:44191454-44191621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
11-177
               

               
Cow position:
               
chr2:69823563-69823734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr2:44025354-44025521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr2:86261767-86261935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr2:1335721-1335540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr2:12988565-12988745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr2:26806139-26805946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr2:46051327-46051129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
150, 65
               

               
Conread position:
               
11-215
               

               
Cow position:
               
chr2:2827717-2827924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
11-217
               

               
Cow position:
               
chr2:29159880-29160090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr2:23301706-23301913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr2:61480562-61480775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr2:38651488-38651692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr2:41622458-41622670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr2:55496318-55496108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:1422325-1422540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:16487961-16488181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 197
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:17492542-17492330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:42970088-42970295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:45619415-45619208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:46119790-46119580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:48525568-48525343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:49717114-49716897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr2:54700430-54700646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-225
               

               
Cow position:
               
chr2:7194185-7194398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
11-225
               

               
Cow position:
               
chr2:19502503-19502285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
11-225
               

               
Cow position:
               
chr2:25283089-25283303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
66, 156
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr2:65931939-65932159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr2:14634158-14634375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 151
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr2:52596751-52596545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr2:60910164-60910375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 161
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr2:71437404-71437185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr2:41040732-41040514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr2:69419611-69419397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 158
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:777707-777488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:6311226-6311446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:15298513-15298730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:28330773-28330555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 107
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:42801015-42801231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:43624560-43624344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:45623988-45624227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:71486752-71486971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr2:73282590-73282381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:6038987-6039212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:13672498-13672712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:14826250-14826476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:32988539-32988767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:46019650-46019419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:52332663-52332437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:65587131-65587353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr2:80116073-80116294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr2:13369628-13369855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr2:39663351-39663576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
160, 55
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr2:44168042-44168261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr2:45138461-45138245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:387802-387577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:992129-992351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:5300570-5300797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:11656866-11657088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 158
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:15250156-15250366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:16513832-16514054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:17940313-17940089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:19137916-19137692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:19494188-19494413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:21382876-21382650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:22042510-22042753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:22371978-22371756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:27178627-27178846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:29290339-29290119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:29802155-29801946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:32048454-32048678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:32264418-32264195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 193
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:36963501-36963720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:37009384-37009605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 143
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:38953796-38954032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:39067478-39067695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:40410119-40410345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:40728324-40728558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:41007567-41007344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:41088125-41087907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:44022832-44022604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:44065551-44065763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:46033309-46033533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:46161931-46162151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:52484998-52484766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:58074370-58074147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:66149299-66149514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:71624415-71624199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:73544914-73544706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:76861482-76861252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr2:85794994-85794770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr2:21410193-21410430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr2:45505780-45506011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr2:46139294-46139534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
11-253
               

               
Cow position:
               
chr2:39228790-39229027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr2:47065083-47065354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
12-140
               

               
Cow position:
               
chr2:47055882-47056013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
12-159
               

               
Cow position:
               
chr2:12051130-12051274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr2:36575710-36575916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr2:45510584-45510356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 224
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr2:69579705-69579480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr2:15059087-15058864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr2:77941693-77941475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr2:19319978-19320199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr2:21049352-21049136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr2:46189121-46188898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 150
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr2:47403177-47403410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr2:84480526-84480301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
13-147
               

               
Cow position:
               
chr2:79138227-79138362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
13-169
               

               
Cow position:
               
chr2:36017433-36017279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
13-198
               

               
Cow position:
               
chr2:56846724-56846908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
13-219
               

               
Cow position:
               
chr2:80275317-80275109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr2:19294570-19294774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr2:65830363-65830152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
13-224
               

               
Cow position:
               
chr2:8575980-8576188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
13-224
               

               
Cow position:
               
chr2:43131070-43131287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
13-227
               

               
Cow position:
               
chr2:33988342-33988115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr2:39362978-39363205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr2:45478621-45478406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr2:67596042-67595821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
13-232
               

               
Cow position:
               
chr2:19212079-19211864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
13-232
               

               
Cow position:
               
chr2:59397077-59396854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
13-233
               

               
Cow position:
               
chr2:70896010-70896246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr2:79982-79762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr2:41915447-41915229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr2:43591397-43591175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr2:45565680-45565900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr2:69199343-69199126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
14-146
               

               
Cow position:
               
chr2:44232475-44232341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
14-156
               

               
Cow position:
               
chr2:65890645-65890504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-168
               

               
Cow position:
               
chr2:13935686-13935841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
14-168
               

               
Cow position:
               
chr2:20362676-20362521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
14-169
               

               
Cow position:
               
chr2:5130477-5130318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
14-169
               

               
Cow position:
               
chr2:61421191-61421033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
14-169
               

               
Cow position:
               
chr2:85496354-85496200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-178
               

               
Cow position:
               
chr2:38205781-38205612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-190
               

               
Cow position:
               
chr2:68870671-68870847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
14-191
               

               
Cow position:
               
chr2:84550044-84550220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr2:24722294-24722106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
14-198
               

               
Cow position:
               
chr2:31460354-31460173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
14-198
               

               
Cow position:
               
chr2:37113212-37113034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
14-198
               

               
Cow position:
               
chr2:80903932-80903750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
14-199
               

               
Cow position:
               
chr2:53430696-53430882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
14-202
               

               
Cow position:
               
chr2:73129125-73129318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr2:50565911-50566107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
14-206
               

               
Cow position:
               
chr2:12686813-12686623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
14-206
               

               
Cow position:
               
chr2:43136468-43136271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
14-208
               

               
Cow position:
               
chr2:46968212-46968020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr2:13354653-13354855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr2:13582561-13582762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
14-216
               

               
Cow position:
               
chr2:27128852-27128645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
14-216
               

               
Cow position:
               
chr2:37791519-37791312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
14-216
               

               
Cow position:
               
chr2:68292745-68292952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr2:47090739-47090948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr2:50352870-50353071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr2:20791456-20791239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr2:76110374-76110576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr2:77157368-77157163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 97
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr2:72527937-72528148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr2:15734392-15734608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr2:28711022-28710821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr2:40597555-40597761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
140, 59
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr2:69350588-69350379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr2:79837749-79837534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr2:31355674-31355890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr2:16505500-16505278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr2:18621387-18621604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr2:17328727-17328937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr2:85926035-85926258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr2:16839613-16839833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr2:21380421-21380208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr2:30351731-30351508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr2:41145291-41145514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr2:46052477-46052696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr2:71622070-71621853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:15348370-15348593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:19058130-19058349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:19500107-19499884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:21074150-21073927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:35988642-35988421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 191
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:42979003-42978780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr2:50013335-50013554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
14-233
               

               
Cow position:
               
chr2:38640300-38640516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
14-233
               

               
Cow position:
               
chr2:40257435-40257218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
14-233
               

               
Cow position:
               
chr2:76313891-76313668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:4644248-4644468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:4921954-4921734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:9726121-9725901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:14847843-14848047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:15871915-15872128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:18858167-18857958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:20947350-20947567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:24218239-24218018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:28820341-28820570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:29121860-29122083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:29734802-29735025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:30954619-30954394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:31783907-31784127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:34750007-34749793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:38662716-38662497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:38965597-38965808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:39068266-39068478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:39566717-39566497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:41248548-41248764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:43994912-43995129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:45784714-45784948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 212
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:46058030-46057813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:46130176-46129967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:48635068-48634853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 175
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:49862631-49862854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:56003214-56003434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:57776324-57776551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:57802512-57802283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:60261015-60260787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:64773362-64773600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 230
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:65059015-65059241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 219
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:67301996-67302217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:69109372-69109146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:80177610-80177399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:80961995-80961763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:82116067-82116285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr2:82957655-82957880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr2:14218628-14218856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
15-139
               

               
Cow position:
               
chr2:39564332-39564458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
15-158
               

               
Cow position:
               
chr2:81388671-81388814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-160
               

               
Cow position:
               
chr2:80963668-80963523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
130, 58
               

               
Conread position:
               
15-161
               

               
Cow position:
               
chr2:63718434-63718292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
15-165
               

               
Cow position:
               
chr2:44482670-44482524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
15-174
               

               
Cow position:
               
chr2:42293232-42293390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
15-198
               

               
Cow position:
               
chr2:15219091-15219281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
15-198
               

               
Cow position:
               
chr2:27173347-27173525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
15-198
               

               
Cow position:
               
chr2:66480208-66480028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
15-201
               

               
Cow position:
               
chr2:39350515-39350323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr2:39095334-39095537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr2:72630427-72630633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
15-216
               

               
Cow position:
               
chr2:51181800-51181594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-221
               

               
Cow position:
               
chr2:16332044-16332235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
15-221
               

               
Cow position:
               
chr2:46614381-46614588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr2:29681816-29682033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr2:43990750-43990963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr2:46120662-46120452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 143
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr2:73360133-73359919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr2:8821209-8821440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr2:33472010-33471800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr2:50914034-50913818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr2:276661-276864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr2:44051289-44051506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:12950187-12949965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:16514761-16514991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:16890075-16889858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:24271206-24271413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:29343435-29343205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:32660155-32660380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:45596961-45597177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr2:76562084-76562321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-235
               

               
Cow position:
               
chr2:6267799-6267566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr2:22370965-22370744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr2:26500955-26500726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
16-143
               

               
Cow position:
               
chr2:30816949-30817077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr2:46383487-46383298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
16-198
               

               
Cow position:
               
chr2:11631505-11631689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr2:46230345-46230145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
16-219
               

               
Cow position:
               
chr2:57565356-57565150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
16-221
               

               
Cow position:
               
chr2:16428417-16428216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
16-221
               

               
Cow position:
               
chr2:46204495-46204705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 117
               

               
Conread position:
               
16-221
               

               
Cow position:
               
chr2:67386498-67386285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr2:15229504-15229733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr2:35092714-35092511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr2:18589552-18589339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
106, 145
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr2:31387375-31387165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:9543293-9543510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:31749990-31749768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:33251110-33250889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:50449931-50449711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 131
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:54883455-54883671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:57733413-57733626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:58153684-58153902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:67479954-67480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:67927816-67927591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr2:81480829-81481044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-237
               

               
Cow position:
               
chr2:58135413-58135187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr2:76762196-76762407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
17-225
               

               
Cow position:
               
chr2:54967988-54968199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr2:46124720-46124492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr2:24593854-24594060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr2:55632756-55632970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr2:64323218-64323436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr2:68190660-68190448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr2:75227181-75227403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr2:80770098-80770301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
18-182
               

               
Cow position:
               
chr2:39263471-39263636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 162
               

               
Conread position:
               
18-206
               

               
Cow position:
               
chr2:61501445-61501625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
18-210
               

               
Cow position:
               
chr2:46014747-46014944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
18-219
               

               
Cow position:
               
chr2:46126154-46125955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr2:86541171-86540963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr2:39334680-39334461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr2:1708954-1709166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr2:45935979-45935769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr2:53501054-53500847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
19-172
               

               
Cow position:
               
chr2:45537204-45537052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
19-232
               

               
Cow position:
               
chr2:52345982-52345765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr2:24530350-24530562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 143
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr2:32431754-32431539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr2:49467611-49467828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 192
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr2:67745234-67745448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr2:69142496-69142698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
21-158
               

               
Cow position:
               
chr2:40880055-40880192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-215
               

               
Cow position:
               
chr2:44007403-44007608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
21-224
               

               
Cow position:
               
chr2:16847168-16847373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
21-224
               

               
Cow position:
               
chr2:56837672-56837463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr2:44170543-44170749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
21-231
               

               
Cow position:
               
chr2:45642501-45642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr2:2931039-2931255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr2:25922395-25922608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
22-235
               

               
Cow position:
               
chr2:39371401-39371610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr2:1762781-1762953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
23-233
               

               
Cow position:
               
chr2:12139567-12139347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 214
               

               
Conread position:
               
24-234
               

               
Cow position:
               
chr2:46316859-46317072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
46, 192
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr2:41147856-41148055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chr2:33497216-33497018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
25-221
               

               
Cow position:
               
chr2:35948691-35948495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr2:51099987-51099781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr2:3739857-3739645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr2:41462436-41462227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr2:1476398-1476607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
179, 142
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr2:5604513-5604719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr2:16669457-16669656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr2:39750104-39750302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr2:46202252-46202460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
27-232
               

               
Cow position:
               
chr2:3931734-3931533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr2:80848073-80848282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
27-235
               

               
Cow position:
               
chr2:37973340-37973126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 201
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr2:5755301-5755104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
30-168
               

               
Cow position:
               
chr2:7383695-7383555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
30-200
               

               
Cow position:
               
chr2:74079112-74078945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr2:46053463-46053672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr2:72315819-72315613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
31-175
               

               
Cow position:
               
chr2:40058745-40058599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
31-232
               

               
Cow position:
               
chr2:78249733-78249936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
31-234
               

               
Cow position:
               
chr2:29395015-29394807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
32-234
               

               
Cow position:
               
chr2:14884236-14884439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr2:63568709-63568908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr2:65554807-65554603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 159
               

               
Conread position:
               
35-173
               

               
Cow position:
               
chr2:40431804-40431662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
35-232
               

               
Cow position:
               
chr2:37224066-37224267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
35-233
               

               
Cow position:
               
chr2:19164967-19164771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
36-210
               

               
Cow position:
               
chr2:21949973-21950149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
36-234
               

               
Cow position:
               
chr2:39642749-39642946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 164
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr2:39514034-39514243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
37-217
               

               
Cow position:
               
chr2:2437601-2437425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
37-246
               

               
Cow position:
               
chr2:11217792-11218012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 216
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr2:82374441-82374624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
38-234
               

               
Cow position:
               
chr2:46378791-46378593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
42-234
               

               
Cow position:
               
chr2:14710115-14709928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr2:46300619-46300767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
43-226
               

               
Cow position:
               
chr2:26361760-26361949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr2:64473343-64473159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr2:60182021-60181832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr2:13468221-13468415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr2:33560666-33560475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
44-216
               

               
Cow position:
               
chr2:64465769-64465596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
44-217
               

               
Cow position:
               
chr2:68064573-68064751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
44-221
               

               
Cow position:
               
chr2:58310694-58310876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
44-224
               

               
Cow position:
               
chr2:9062684-9062869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-224
               

               
Cow position:
               
chr2:73637165-73636981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr2:19017458-19017647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr2:11001063-11000872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr2:26694614-26694807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr2:53652858-53653052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr2:55004294-55004481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chr2:80235347-80235180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr2:38234084-38234275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
46-233
               

               
Cow position:
               
chr2:37891482-37891285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
46-234
               

               
Cow position:
               
chr2:78379410-78379222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
47-201
               

               
Cow position:
               
chr2:45907563-45907718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
47-221
               

               
Cow position:
               
chr2:37652258-37652439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
48-221
               

               
Cow position:
               
chr2:24469366-24469198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
48-224
               

               
Cow position:
               
chr2:56102320-56102145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr2:485591-485772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr2:46111038-46110846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
53-196
               

               
Cow position:
               
chr2:75190683-75190826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
53-221
               

               
Cow position:
               
chr2:9476420-9476250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr2:12889816-12889628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr2:21171620-21171801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr2:41008276-41008095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr2:44215519-44215699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
54-198
               

               
Cow position:
               
chr2:5479672-5479531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
54-198
               

               
Cow position:
               
chr2:49931850-49931993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
54-198
               

               
Cow position:
               
chr2:68998339-68998482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
54-210
               

               
Cow position:
               
chr2:78669906-78669745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
54-231
               

               
Cow position:
               
chr2:65603618-65603444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
54-232
               

               
Cow position:
               
chr2:44103644-44103470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
54-234
               

               
Cow position:
               
chr2:22759959-22759775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
54-234
               

               
Cow position:
               
chr2:39334852-39334675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
54-234
               

               
Cow position:
               
chr2:39590275-39590454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
55-199
               

               
Cow position:
               
chr2:53575970-53575822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
55-231
               

               
Cow position:
               
chr2:66562023-66561842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr2:12873429-12873606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr2:47018865-47019042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr2:67047439-67047620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr2:70449046-70449223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
56-232
               

               
Cow position:
               
chr2:44313696-44313519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
56-233
               

               
Cow position:
               
chr2:19191808-19191623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
56-234
               

               
Cow position:
               
chr2:75637717-75637532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
56-247
               

               
Cow position:
               
chr2:54931818-54931629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
57-198
               

               
Cow position:
               
chr2:72612461-72612601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
57-219
               

               
Cow position:
               
chr2:53567510-53567668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 75
               
UCSC Genome Browser

               
Conread position:
               
57-221
               

               
Cow position:
               
chr2:56339009-56338850 (view  custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 81
               
UCSC Genome Browser

               
               
               
Conread position:
58-234

               
               
               
Cow position:
chr2:1364578-1364398 (view  custom track)

               
               
               
Alignm length:
183

               
               
               
Alignm identity:
130

               
               
               
Alignm E-value:
5e-21

               
               
               
Alignm gaps (pig, cow):
15, 63
UCSC Genome Browser

               
               
               
Conread position:
59-224

               
               
               
Cow position:
chr2:22371388-22371552 (view  custom track)

               
               
               
Alignm length:
169

               
               
               
Alignm identity:
127

               
               
               
Alignm E-value:
7e-25

               
               
               
Alignm gaps (pig, cow):
21, 47

               
               
               Conread position:59-232
               
               
               Cow position:chr2:38619414-38619240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):14, 145

               
               
               Conread position:61-227
               
               
               Cow position:chr2:50368219-50368388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):67, 13

               
               
               Conread position:64-231
               
               
               Cow position:chr2:85392210-85392047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:64-234
               
               
               Cow position:chr2:38884393-38884226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:122
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:66-251
               
               
               Cow position:chr2:61681528-61681710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):87, 149

               
               
               Conread position:67-234
               
               
               Cow position:chr2:3773294-3773127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:68-234
               
               
               Cow position:chr2:70824198-70824038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):66, 53

               
               
               Conread position:71-197
               
               
               Cow position:chr2:16409509-16409635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:101
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:71-206
               
               
               Cow position:chr2:81493562-81493429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:106
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:71-216
               
               
               Cow position:chr2:12186667-12186810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):39, 45

               
               
               Conread position:71-221
               
               
               Cow position:chr2:78116326-78116174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:71-224
               
               
               Cow position:chr2:74070369-74070521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:116
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):129, 88

               
               
               Conread position:71-228
               
               
               Cow position:chr2:47165793-47165637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):90, 23

               
               
               Conread position:71-231
               
               
               Cow position:chr2:47111667-47111822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):34, 40

               
               
               Conread position:71-231
               
               
               Cow position:chr2:47194998-47195162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:119
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:71-233
               
               
               Cow position:chr2:12816667-12816833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):27, 32

               
               
               Conread position:71-233
               
               
               Cow position:chr2:39483520-39483684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:1888631-1888477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:9416757-9416604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:24669401-24669568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:30127253-30127091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:123
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):81, 112

               
               
               Conread position:71-234
               
               
               Cow position:chr2:30384231-30384066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:36124470-36124632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):83, 34

               
               
               Conread position:71-234
               
               
               Cow position:chr2:40488843-40489001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:119
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:42897702-42897867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:43139619-43139456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):81, 10

               
               
               Conread position:71-234
               
               
               Cow position:chr2:44063739-44063579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):88, 59

               
               
               Conread position:71-234
               
               
               Cow position:chr2:64562902-64562738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:71-234
               
               
               Cow position:chr2:68328816-68328653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:71-237
               
               
               Cow position:chr2:38913521-38913684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):21, 90

               
               
               Conread position:72-237
               
               
               Cow position:chr2:11435324-11435486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:73-234
               
               
               Cow position:chr2:55526735-55526575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:74-234
               
               
               Cow position:chr2:27599459-27599303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):80, 71

               
               
               Conread position:75-198
               
               
               Cow position:chr2:55959042-55958914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:103
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:77-237
               
               
               Cow position:chr2:73981675-73981831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:119
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:79-232
               
               
               Cow position:chr2:16751834-16751679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:117
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):34, 39

               
               
               Conread position:81-234
               
               
               Cow position:chr2:51024153-51024006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:81-234
               
               
               Cow position:chr2:79245446-79245600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):86, 111

               
               
               Conread position:81-234
               
               
               Cow position:chr2:84750756-84750906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:112
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:82-221
               
               
               Cow position:chr2:14313463-14313603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:82-232
               
               
               Cow position:chr2:74013023-74012871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:83-228
               
               
               Cow position:chr2:47123510-47123362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):28, 23

               
               
               Conread position:83-234
               
               
               Cow position:chr2:1036340-1036188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:83-297
               
               
               Cow position:chr2:1410088-1409874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:121
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):71, 145

               
               
               Conread position:84-234
               
               
               Cow position:chr2:82304001-82304147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:86-233
               
               
               Cow position:chr2:1205356-1205503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:86-234
               
               
               Cow position:chr2:58336171-58336024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:89-234
               
               
               Cow position:chr2:67810987-67810841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):65, 27

               
               
               Conread position:90-234
               
               
               Cow position:chr2:50446035-50446181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:107
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:91-234
               
               
               Cow position:chr2:13721949-13722088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):129, 68

               
               
               Conread position:95-234
               
               
               Cow position:chr2:33603447-33603583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:107-234
               
               
               Cow position:chr2:30394218-30394085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:103
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:116-234
               
               
               Cow position:chr2:46315690-46315574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:97
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):53, 0
Show alignments to all cow chromosomes.