Cow genome map

Conread name: Ss1.1-Mixn-0012m18.5

Conread position: 2-206
Cow position: chr20:31927463-31927247 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 151

Conread position: 3-234
Cow position: chr20:8821728-8821501 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 31

Conread position: 4-237
Cow position: chr20:2204674-2204442 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 7

Conread position: 5-231
Cow position: chr20:40303872-40303644 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 148, 12

Conread position: 7-234
Cow position: chr20:15548884-15548651 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 115

Conread position: 7-234
Cow position: chr20:16941276-16941041 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 9, 53

Conread position: 8-178
Cow position: chr20:35907043-35906864 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 8-234
Cow position: chr20:42309957-42309726 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 111

Conread position: 9-176
Cow position: chr20:23870804-23870635 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 39

Conread position: 9-198
Cow position: chr20:13652353-13652165 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 68, 153

Conread position: 9-221
Cow position: chr20:25162111-25161903 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 16

Conread position: 9-234
Cow position: chr20:35146035-35146255 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 124

Conread position: 9-234
Cow position: chr20:40423091-40422857 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 27

Conread position: 10-168
Cow position: chr20:9537154-9537308 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 10-169
Cow position: chr20:23064815-23064658 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 10-223
Cow position: chr20:36806536-36806752 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 111

Conread position: 10-234
Cow position: chr20:746959-747173 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 83

Conread position: 10-234
Cow position: chr20:5950627-5950399 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 63, 15

Conread position: 10-234
Cow position: chr20:34083732-34083962 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 33

Conread position: 10-234
Cow position: chr20:36779714-36779478 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 11-123
Cow position: chr20:35797628-35797740 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-157
Cow position: chr20:23678701-23678550 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 11-161
Cow position: chr20:42458840-42458687 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 11-168
Cow position: chr20:42469777-42469935 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 11-169
Cow position: chr20:40157916-40158077 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 11-196
Cow position: chr20:36633832-36634017 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 63

Conread position: 11-198
Cow position: chr20:6372543-6372350 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 79

Conread position: 11-198
Cow position: chr20:11188785-11188609 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 11-198
Cow position: chr20:35208190-35207990 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 43

Conread position: 11-200
Cow position: chr20:16405628-16405829 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 11-205
Cow position: chr20:10246037-10245844 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 104

Conread position: 11-206
Cow position: chr20:2743121-2742921 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 11-206
Cow position: chr20:11135746-11135539 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 11-217
Cow position: chr20:6603059-6603255 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 33

Conread position: 11-218
Cow position: chr20:39417883-39417677 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 31

Conread position: 11-220
Cow position: chr20:354881-354671 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 143, 56

Conread position: 11-221
Cow position: chr20:5702740-5702950 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 143

Conread position: 11-221
Cow position: chr20:15822566-15822778 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 83

Conread position: 11-221
Cow position: chr20:19237094-19237299 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 21

Conread position: 11-221
Cow position: chr20:24711856-24712068 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 192

Conread position: 11-221
Cow position: chr20:28605224-28605434 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 137

Conread position: 11-222
Cow position: chr20:5814583-5814799 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 11-222
Cow position: chr20:20967337-20967548 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 61, 151

Conread position: 11-224
Cow position: chr20:15118292-15118509 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 120

Conread position: 11-224
Cow position: chr20:18392248-18392026 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 146, 11

Conread position: 11-224
Cow position: chr20:20892652-20892444 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 158, 65

Conread position: 11-224
Cow position: chr20:23850637-23850852 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 182

Conread position: 11-224
Cow position: chr20:34597081-34596872 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 130

Conread position: 11-226
Cow position: chr20:22959330-22959112 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 23

Conread position: 11-227
Cow position: chr20:9267088-9266866 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 90

Conread position: 11-228
Cow position: chr20:11043459-11043225 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 11-228
Cow position: chr20:20898574-20898354 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 11-230
Cow position: chr20:14433406-14433184 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 121

Conread position: 11-231
Cow position: chr20:3148700-3148919 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 47

Conread position: 11-231
Cow position: chr20:4334514-4334300 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 66, 147

Conread position: 11-231
Cow position: chr20:6240504-6240282 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 90

Conread position: 11-231
Cow position: chr20:12581938-12581718 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 55, 137

Conread position: 11-232
Cow position: chr20:3141590-3141814 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 61, 108

Conread position: 11-232
Cow position: chr20:4945235-4945011 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 71

Conread position: 11-232
Cow position: chr20:6248585-6248360 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 62, 193

Conread position: 11-232
Cow position: chr20:12995991-12995754 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 92

Conread position: 11-232
Cow position: chr20:14739803-14739581 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 97

Conread position: 11-232
Cow position: chr20:17251734-17251958 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 45

Conread position: 11-233
Cow position: chr20:11751670-11751894 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 101

Conread position: 11-234
Cow position: chr20:398291-398071 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 131

Conread position: 11-234
Cow position: chr20:1139751-1139525 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 78

Conread position: 11-234
Cow position: chr20:2298770-2298556 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 106

Conread position: 11-234
Cow position: chr20:4755818-4755593 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 24

Conread position: 11-234
Cow position: chr20:11359615-11359398 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 17

Conread position: 11-234
Cow position: chr20:11548706-11548487 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 135

Conread position: 11-234
Cow position: chr20:13876686-13876468 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 143, 57

Conread position: 11-234
Cow position: chr20:14620287-14620065 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 136

Conread position: 11-234
Cow position: chr20:15568933-15568722 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 156

Conread position: 11-234
Cow position: chr20:23590731-23590510 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 189

Conread position: 11-234
Cow position: chr20:23846649-23846424 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 62, 161

Conread position: 11-234
Cow position: chr20:28249197-28249424 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 62, 29

Conread position: 11-234
Cow position: chr20:28594299-28594533 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 126

Conread position: 11-234
Cow position: chr20:28818911-28818695 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 95

Conread position: 11-234
Cow position: chr20:34251657-34251428 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 11-234
Cow position: chr20:38514793-38515030 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 112

Conread position: 12-155
Cow position: chr20:6096478-6096332 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 12-158
Cow position: chr20:17845978-17846126 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 12-216
Cow position: chr20:6423988-6424177 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 12-225
Cow position: chr20:16291705-16291923 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 12-230
Cow position: chr20:10200363-10200586 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 12-232
Cow position: chr20:13023479-13023263 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 12-232
Cow position: chr20:14282937-14283162 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 12-232
Cow position: chr20:35741785-35742010 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 12-233
Cow position: chr20:25009614-25009393 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 18

Conread position: 12-234
Cow position: chr20:13829281-13829501 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 36

Conread position: 12-234
Cow position: chr20:23548765-23548998 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 125

Conread position: 12-234
Cow position: chr20:34202651-34202883 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 12-236
Cow position: chr20:41473725-41473506 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 142

Conread position: 13-135
Cow position: chr20:23506452-23506326 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 13-191
Cow position: chr20:22484880-22485060 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 59, 42

Conread position: 13-218
Cow position: chr20:9433605-9433807 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 135

Conread position: 13-224
Cow position: chr20:5364948-5365159 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 140, 55

Conread position: 13-225
Cow position: chr20:7426179-7425966 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 158

Conread position: 13-231
Cow position: chr20:33532320-33532528 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 152

Conread position: 13-234
Cow position: chr20:7738213-7737993 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 148

Conread position: 13-234
Cow position: chr20:20984010-20984238 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 13-234
Cow position: chr20:38551390-38551618 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 68

Conread position: 13-237
Cow position: chr20:39398499-39398726 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 102

Conread position: 14-151
Cow position: chr20:16492091-16492232 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 14-153
Cow position: chr20:11482115-11481974 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 108

Conread position: 14-154
Cow position: chr20:28067400-28067262 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 14-157
Cow position: chr20:4002116-4002258 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 13

Conread position: 14-158
Cow position: chr20:19751326-19751473 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 14-158
Cow position: chr20:34777199-34777346 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 14-161
Cow position: chr20:15565808-15565660 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 80

Conread position: 14-168
Cow position: chr20:15589060-15589219 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 14-169
Cow position: chr20:20056465-20056309 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 14

Conread position: 14-172
Cow position: chr20:10772225-10772387 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 75

Conread position: 14-190
Cow position: chr20:12239662-12239489 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 132

Conread position: 14-197
Cow position: chr20:13943784-13943964 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 154, 54

Conread position: 14-206
Cow position: chr20:15766130-15766325 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 5

Conread position: 14-209
Cow position: chr20:8429766-8429958 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 94

Conread position: 14-209
Cow position: chr20:16818438-16818637 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 133

Conread position: 14-218
Cow position: chr20:41089773-41089567 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 59

Conread position: 14-220
Cow position: chr20:33067341-33067132 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 59, 120

Conread position: 14-224
Cow position: chr20:1824611-1824400 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 134

Conread position: 14-224
Cow position: chr20:3282885-3283100 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 14-224
Cow position: chr20:25972375-25972160 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 117

Conread position: 14-228
Cow position: chr20:11101433-11101637 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 14-231
Cow position: chr20:24097020-24097233 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 134

Conread position: 14-231
Cow position: chr20:30744702-30744483 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 199

Conread position: 14-232
Cow position: chr20:25021447-25021670 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 87

Conread position: 14-232
Cow position: chr20:36239266-36239489 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 14-232
Cow position: chr20:39325410-39325631 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 192

Conread position: 14-233
Cow position: chr20:5078646-5078876 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 14-234
Cow position: chr20:8547087-8547301 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 139

Conread position: 14-234
Cow position: chr20:14490270-14490483 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 14-234
Cow position: chr20:14980490-14980266 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 125

Conread position: 14-234
Cow position: chr20:15529880-15530101 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 71

Conread position: 14-234
Cow position: chr20:18379398-18379618 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 89

Conread position: 14-234
Cow position: chr20:20158155-20158372 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 144

Conread position: 14-234
Cow position: chr20:22065091-22065302 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 38

Conread position: 14-234
Cow position: chr20:24069825-24070043 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 157

Conread position: 14-234
Cow position: chr20:29754805-29755019 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 77

Conread position: 14-234
Cow position: chr20:29845070-29845296 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 118

Conread position: 14-234
Cow position: chr20:33435145-33434918 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 116

Conread position: 14-234
Cow position: chr20:33623533-33623318 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 94

Conread position: 14-234
Cow position: chr20:36741495-36741703 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 14-235
Cow position: chr20:21345448-21345681 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 14-237
Cow position: chr20:21428180-21428402 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 112

Conread position: 14-248
Cow position: chr20:8578268-8578510 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 14-252
Cow position: chr20:3599376-3599140 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 91, 54

Conread position: 15-157
Cow position: chr20:13025594-13025443 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 15-157
Cow position: chr20:21928925-21929070 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 15-157
Cow position: chr20:39962595-39962740 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 100

Conread position: 15-169
Cow position: chr20:5636501-5636659 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 15-197
Cow position: chr20:40781981-40782171 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 15-214
Cow position: chr20:30821450-30821645 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 29

Conread position: 15-219
Cow position: chr20:10188295-10188501 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 89

Conread position: 15-221
Cow position: chr20:14806907-14807111 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 133

Conread position: 15-221
Cow position: chr20:14879809-14880014 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 154

Conread position: 15-224
Cow position: chr20:34097936-34097717 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 15-227
Cow position: chr20:20934712-20934500 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 18

Conread position: 15-231
Cow position: chr20:37919350-37919138 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 119

Conread position: 15-234
Cow position: chr20:34221499-34221723 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 115

Conread position: 15-248
Cow position: chr20:5703491-5703727 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 197

Conread position: 16-156
Cow position: chr20:580899-580756 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 16-159
Cow position: chr20:35591627-35591480 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 16-228
Cow position: chr20:14759644-14759439 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 132

Conread position: 16-232
Cow position: chr20:6054488-6054268 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 179

Conread position: 16-232
Cow position: chr20:39016853-39016630 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 16-234
Cow position: chr20:7442111-7441901 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 16-234
Cow position: chr20:12126283-12126060 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 17-158
Cow position: chr20:21372330-21372474 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 17-166
Cow position: chr20:11038604-11038750 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 51

Conread position: 17-232
Cow position: chr20:11008192-11008412 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 17-233
Cow position: chr20:21019590-21019798 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 17

Conread position: 17-234
Cow position: chr20:7417145-7416919 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 98

Conread position: 18-220
Cow position: chr20:16548255-16548045 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 18-234
Cow position: chr20:8679644-8679419 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 18-234
Cow position: chr20:20125009-20124790 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 82

Conread position: 19-234
Cow position: chr20:9376494-9376703 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 128

Conread position: 20-166
Cow position: chr20:11444104-11444249 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 20-166
Cow position: chr20:14100408-14100261 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 20-231
Cow position: chr20:35192797-35192997 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 88

Conread position: 20-233
Cow position: chr20:36312483-36312271 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 141

Conread position: 22-228
Cow position: chr20:19746002-19746207 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 13

Conread position: 22-229
Cow position: chr20:39269058-39268846 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 120

Conread position: 25-218
Cow position: chr20:14897767-14897965 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 25-221
Cow position: chr20:18487957-18488155 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 29

Conread position: 25-232
Cow position: chr20:385226-385024 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 52

Conread position: 25-234
Cow position: chr20:8556239-8556029 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 144

Conread position: 25-234
Cow position: chr20:10208838-10209048 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 96

Conread position: 25-234
Cow position: chr20:38089943-38090158 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 26-232
Cow position: chr20:17370220-17370006 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 63

Conread position: 26-232
Cow position: chr20:30639752-30639539 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 26-234
Cow position: chr20:26996561-26996775 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 94

Conread position: 27-216
Cow position: chr20:29990415-29990222 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 62

Conread position: 29-221
Cow position: chr20:31845251-31845060 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 133

Conread position: 30-232
Cow position: chr20:19328423-19328637 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 101

Conread position: 30-232
Cow position: chr20:30755315-30755522 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 30-234
Cow position: chr20:19636141-19635937 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 130

Conread position: 30-234
Cow position: chr20:37609657-37609864 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 68

Conread position: 31-234
Cow position: chr20:21325362-21325566 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 116

Conread position: 33-198
Cow position: chr20:36671394-36671217 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 98

Conread position: 33-224
Cow position: chr20:36097560-36097754 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 34-231
Cow position: chr20:26041059-26040859 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 35-232
Cow position: chr20:27315022-27315215 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 35-234
Cow position: chr20:21291700-21291910 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 36-220
Cow position: chr20:14607870-14607686 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 120

Conread position: 36-234
Cow position: chr20:21721251-21721461 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 176

Conread position: 36-234
Cow position: chr20:21941475-21941667 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 112

Conread position: 36-234
Cow position: chr20:24883326-24883119 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 36-234
Cow position: chr20:32847386-32847584 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 133

Conread position: 37-234
Cow position: chr20:2316383-2316186 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 123

Conread position: 38-224
Cow position: chr20:7934327-7934509 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 22

Conread position: 38-234
Cow position: chr20:35442239-35442041 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 194

Conread position: 40-227
Cow position: chr20:20590256-20590071 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 122

Conread position: 40-233
Cow position: chr20:28935593-28935402 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 14

Conread position: 41-234
Cow position: chr20:19834784-19834590 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 107

Conread position: 41-234
Cow position: chr20:32709399-32709199 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 42-166
Cow position: chr20:396856-396980 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 42-206
Cow position: chr20:18831831-18831667 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 120

Conread position: 42-234
Cow position: chr20:23358444-23358253 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 28

Conread position: 43-214
Cow position: chr20:7155229-7155398 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 43-232
Cow position: chr20:32636279-32636094 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 43-234
Cow position: chr20:8021174-8021378 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 43-234
Cow position: chr20:19201579-19201775 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 43-234
Cow position: chr20:23936136-23935937 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 61

Conread position: 44-228
Cow position: chr20:11499061-11499238 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 44-232
Cow position: chr20:9034167-9033977 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 75

Conread position: 44-235
Cow position: chr20:33076774-33076580 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 77

Conread position: 45-232
Cow position: chr20:37357908-37358098 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 48-224
Cow position: chr20:33359420-33359238 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 145

Conread position: 50-234
Cow position: chr20:35310383-35310571 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 52-231
Cow position: chr20:12334391-12334569 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 122

Conread position: 52-237
Cow position: chr20:8245779-8245961 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 100, 50

Conread position: 53-231
Cow position: chr20:22922978-22923152 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 93

Conread position: 53-232
Cow position: chr20:17544683-17544866 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 5

Conread position: 53-243
Cow position: chr20:25464987-25464796 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 67

Conread position: 54-198
Cow position: chr20:30710574-30710429 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 54-224
Cow position: chr20:20459653-20459823 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 52

Conread position: 54-231
Cow position: chr20:15760512-15760330 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 59

Conread position: 54-234
Cow position: chr20:4892060-4891877 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 55-195
Cow position: chr20:19060776-19060638 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 55-231
Cow position: chr20:5078332-5078515 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 140

Conread position: 55-234
Cow position: chr20:40442404-40442222 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 56-231
Cow position: chr20:31468598-31468418 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 57-232
Cow position: chr20:22851540-22851715 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 47

Conread position: 59-198
Cow position: chr20:15515376-15515225 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 60-223
Cow position: chr20:6848960-6849125 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 88

Conread position: 68-197
Cow position: chr20:11822554-11822682 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 71-207
Cow position: chr20:25474632-25474770 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 60

Conread position: 71-221
Cow position: chr20:27323345-27323497 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 71-224
Cow position: chr20:2819622-2819779 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 71-227
Cow position: chr20:26790532-26790366 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 71-234
Cow position: chr20:16977765-16977596 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 71-234
Cow position: chr20:20202298-20202461 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 71-234
Cow position: chr20:27407807-27407654 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 72-229
Cow position: chr20:24657273-24657426 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 47

Conread position: 73-232
Cow position: chr20:23880026-23879867 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 74-232
Cow position: chr20:297926-297765 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 79-234
Cow position: chr20:34271414-34271570 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 34

Conread position: 81-234
Cow position: chr20:23506024-23506177 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 146

Conread position: 81-234
Cow position: chr20:34881308-34881162 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 82-220
Cow position: chr20:18500617-18500757 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 19

Conread position: 83-221
Cow position: chr20:12033531-12033398 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 86-228
Cow position: chr20:35605301-35605438 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 89-234
Cow position: chr20:17524369-17524516 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 106-233
Cow position: chr20:30203417-30203551 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 109-231
Cow position: chr20:33557509-33557633 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 105

Conread position: 117-232
Cow position: chr20:11909562-11909446 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 102

Conread position: 127-228
Cow position: chr20:6048431-6048329 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 18

Show alignments to all cow chromosomes.