• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Mixn-0012m18.5
        

               
Conread position:
               
2-224
               

               
Cow position:
               
chr27:26481206-26481429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr27:15315510-15315281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr27:26087299-26087078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr27:26121751-26121514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr27:10598980-10598745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr27:7958840-7959063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr27:10323826-10323602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
8-157
               

               
Cow position:
               
chr27:27673030-27673181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
8-176
               

               
Cow position:
               
chr27:22423502-22423330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr27:23107916-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
8-230
               

               
Cow position:
               
chr27:24303933-24303706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr27:12596758-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr27:15002991-15003221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-156
               

               
Cow position:
               
chr27:25277125-25276979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
9-158
               

               
Cow position:
               
chr27:28034866-28035014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
9-219
               

               
Cow position:
               
chr27:29431448-29431249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr27:29593644-29593860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
65, 202
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr27:26565776-26565556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr27:6241207-6241432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 208
               

               
Conread position:
               
10-203
               

               
Cow position:
               
chr27:16230950-16231151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr27:20067993-20068188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
135, 157
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr27:21669134-21669326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr27:23890922-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr27:19660916-19660700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr27:17994958-17995175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr27:17646184-17646389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr27:31170080-31170308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 74
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr27:30483313-30483544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr27:24331704-24331473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr27:426953-426728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr27:8962272-8962483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr27:10404132-10404359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr27:30868756-30868993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr27:30914993-30914763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
11-139
               

               
Cow position:
               
chr27:18593252-18593125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-153
               

               
Cow position:
               
chr27:27038858-27038999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-161
               

               
Cow position:
               
chr27:20812888-20812735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
11-163
               

               
Cow position:
               
chr27:27641029-27641182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chr27:30489427-30489588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
11-176
               

               
Cow position:
               
chr27:31017846-31018010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
11-184
               

               
Cow position:
               
chr27:28260553-28260726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr27:22418787-22418962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr27:26506725-26506545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr27:20481382-20481561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr27:23632579-23632395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
11-206
               

               
Cow position:
               
chr27:15925329-15925128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
11-206
               

               
Cow position:
               
chr27:26883272-26883474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr27:29603801-29603601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
11-218
               

               
Cow position:
               
chr27:23860144-23859937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr27:28518281-28518065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr27:13317991-13318206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr27:20637078-20637287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr27:26437138-26437349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr27:27694789-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 127
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr27:30455977-30455764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr27:5553452-5553240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
54, 182
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr27:27058422-27058637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr27:27558521-27558737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
11-225
               

               
Cow position:
               
chr27:6550442-6550226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr27:22454792-22455027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
11-230
               

               
Cow position:
               
chr27:8062366-8062589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr27:13875711-13875494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr27:25152068-25151850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
156, 62
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr27:10979846-10979620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr27:18882634-18882417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr27:20045873-20045656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr27:15865590-15865370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:1636952-1637168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:4944531-4944748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:10307317-10307545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
143, 156
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:11435339-11435569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:12516176-12515952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 178
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:14670399-14670622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:15668788-15669016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:16512188-16512409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:18507633-18507403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:19500250-19500478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:20749031-20749244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:20897042-20897262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:22549784-22550012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:23148149-23147922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:23594304-23594077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:26852603-26852826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:27740308-27740535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:31151364-31151142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr27:31373000-31373214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
12-169
               

               
Cow position:
               
chr27:30908654-30908494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr27:23554347-23554558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr27:27442187-27442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr27:20514801-20514585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr27:12459267-12459047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr27:20283626-20283403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr27:23485191-23484975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr27:212939-212709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr27:28931814-28932044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
13-203
               

               
Cow position:
               
chr27:14303718-14303529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr27:26188810-26188598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
13-233
               

               
Cow position:
               
chr27:18435152-18435371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr27:8790760-8790984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
14-146
               

               
Cow position:
               
chr27:22225615-22225747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-157
               

               
Cow position:
               
chr27:17918333-17918479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
14-158
               

               
Cow position:
               
chr27:30359387-30359240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
14-164
               

               
Cow position:
               
chr27:28290835-28290692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
14-169
               

               
Cow position:
               
chr27:15643153-15642997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr27:22735612-22735819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr27:29380833-29380635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 170
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr27:18739357-18739145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr27:6925065-6924850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr27:24477396-24477192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr27:16088787-16088555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr27:11561756-11561536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr27:19546534-19546760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr27:1353563-1353341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 214
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr27:7935176-7935395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 208
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr27:16965552-16965335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:7412373-7412152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:7649601-7649832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 187
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:12425270-12425046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:13254817-13255035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:15454188-15453971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:17397474-17397693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:20354570-20354356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:20584476-20584709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:23560051-23560271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:25809539-25809758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:26111934-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:26226311-26226530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:26509178-26509398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:27055266-27055054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:27438524-27438750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:28206779-28206562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:28921914-28922137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr27:31386650-31386872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
14-241
               

               
Cow position:
               
chr27:6319899-6319673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 139
               

               
Conread position:
               
15-203
               

               
Cow position:
               
chr27:1768646-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
15-213
               

               
Cow position:
               
chr27:24709532-24709333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
15-220
               

               
Cow position:
               
chr27:26489929-26490133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
15-221
               

               
Cow position:
               
chr27:11993887-11994096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 173
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr27:2592522-2592305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
15-225
               

               
Cow position:
               
chr27:21393527-21393726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr27:22559848-22560061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
15-231
               

               
Cow position:
               
chr27:29319390-29319166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr27:16786808-16786589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr27:19387997-19387779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr27:20828731-20828946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr27:21978156-21978385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr27:26793804-26794026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr27:29388651-29388430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
16-154
               

               
Cow position:
               
chr27:12191501-12191642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
16-158
               

               
Cow position:
               
chr27:1290873-1291015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr27:22489255-22489038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr27:22603157-22602939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr27:15867374-15867154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
36, 152
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr27:299403-299614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr27:20719266-20719045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr27:28896860-28896638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr27:11480658-11480880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr27:11982668-11982890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr27:18558335-18558116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr27:29991469-29991701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr27:30260911-30261150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chr27:26919934-26920113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
17-213
               

               
Cow position:
               
chr27:15332318-15332509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr27:30765008-30764795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr27:9977662-9977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr27:16103784-16103569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr27:28001836-28002043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr27:24731064-24731267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr27:672630-672432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr27:20501815-20501599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
19-227
               

               
Cow position:
               
chr27:16705226-16705018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr27:26118473-26118239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr27:590789-591010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 214
               

               
Conread position:
               
22-224
               

               
Cow position:
               
chr27:20612494-20612289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 106
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr27:11323303-11323087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
23-227
               

               
Cow position:
               
chr27:6106671-6106472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
23-231
               

               
Cow position:
               
chr27:22220525-22220311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
25-162
               

               
Cow position:
               
chr27:26643653-26643519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr27:29613519-29613714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chr27:17933895-17933697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr27:20078833-20078633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr27:20653286-20653490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr27:19508982-19508770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr27:22171266-22171060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr27:23452430-23452221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr27:22035408-22035616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr27:19452969-19452764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr27:26245580-26245782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr27:26323415-26323206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr27:6162443-6162644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 117
               

               
Conread position:
               
30-224
               

               
Cow position:
               
chr27:19557349-19557161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr27:6541596-6541399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
30-232
               

               
Cow position:
               
chr27:20327465-20327257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
30-233
               

               
Cow position:
               
chr27:31210511-31210309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr27:20484694-20484491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr27:20548775-20548568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
31-234
               

               
Cow position:
               
chr27:24223915-24223713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
33-234
               

               
Cow position:
               
chr27:13902955-13903171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
33-234
               

               
Cow position:
               
chr27:19576362-19576565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
34-210
               

               
Cow position:
               
chr27:13251972-13251806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
34-231
               

               
Cow position:
               
chr27:17102856-17102661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr27:16246767-16246566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
35-234
               

               
Cow position:
               
chr27:11208595-11208799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
36-232
               

               
Cow position:
               
chr27:26400763-26400957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
38-157
               

               
Cow position:
               
chr27:17918761-17918883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
38-221
               

               
Cow position:
               
chr27:22254751-22254561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
38-231
               

               
Cow position:
               
chr27:25790248-25790064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
39-195
               

               
Cow position:
               
chr27:27551000-27551159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
39-227
               

               
Cow position:
               
chr27:15859342-15859532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
40-234
               

               
Cow position:
               
chr27:11134040-11133846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
41-231
               

               
Cow position:
               
chr27:22268178-22267981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
41-237
               

               
Cow position:
               
chr27:13204412-13204220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
42-217
               

               
Cow position:
               
chr27:23060163-23060341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
43-221
               

               
Cow position:
               
chr27:232505-232322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr27:26236277-26236098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chr27:31498730-31498551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr27:1184226-1184408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr27:13801760-13801565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 153
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr27:29308294-29308102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr27:12284945-12284752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr27:18688458-18688653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr27:28015784-28015977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 102
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr27:18791559-18791756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
45-219
               

               
Cow position:
               
chr27:31248664-31248833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
45-221
               

               
Cow position:
               
chr27:19933018-19932837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
45-228
               

               
Cow position:
               
chr27:29236511-29236322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr27:24240303-24240111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
47-234
               

               
Cow position:
               
chr27:28254185-28253994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
53-224
               

               
Cow position:
               
chr27:26314182-26314357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr27:20048575-20048397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr27:29249533-29249344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
53-235
               

               
Cow position:
               
chr27:31157753-31157567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
54-198
               

               
Cow position:
               
chr27:18491494-18491352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
54-221
               

               
Cow position:
               
chr27:26909653-26909817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
54-232
               

               
Cow position:
               
chr27:1067508-1067336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
54-232
               

               
Cow position:
               
chr27:23994475-23994655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
55-226
               

               
Cow position:
               
chr27:30996889-30997063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr27:20081192-20081373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr27:20266286-20266468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
56-225
               

               
Cow position:
               
chr27:29892661-29892489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
56-232
               

               
Cow position:
               
chr27:29246213-29246384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
56-234
               

               
Cow position:
               
chr27:9504491-9504311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
57-198
               

               
Cow position:
               
chr27:15434258-15434118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
57-232
               

               
Cow position:
               
chr27:18873982-18873813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
57-233
               

               
Cow position:
               
chr27:22497957-22497787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
58-231
               

               
Cow position:
               
chr27:21951044-21951219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
59-235
               

               
Cow position:
               
chr27:23232849-23232669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
60-235
               

               
Cow position:
               
chr27:19992085-19991906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
61-198
               

               
Cow position:
               
chr27:7847651-7847511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
62-234
               

               
Cow position:
               
chr27:19779807-19779635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
67-234
               

               
Cow position:
               
chr27:10581457-10581292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
70-185
               

               
Cow position:
               
chr27:23495788-23495902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
71-221
               

               
Cow position:
               
chr27:23177392-23177541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
71-222
               

               
Cow position:
               
chr27:17908339-17908492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr27:23477866-23477715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr27:11528851-11528693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
71-233
               

               
Cow position:
               
chr27:30444760-30444915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr27:9253193-9253354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr27:11145799-11145640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr27:26984082-26983921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr27:27449965-27450125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr27:29614962-29614800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr27:31183496-31183331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 154
               

               
Conread position:
               
72-234
               

               
Cow position:
               
chr27:22748247-22748086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
73-234
               

               
Cow position:
               
chr27:178781-178621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
74-228
               

               
Cow position:
               
chr27:25000043-25000203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
74-234
               

               
Cow position:
               
chr27:19074105-19074265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
74-234
               

               
Cow position:
               
chr27:21661053-21660894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
76-234
               

               
Cow position:
               
chr27:29183301-29183468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
77-234
               

               
Cow position:
               
chr27:20561495-20561346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
79-232
               

               
Cow position:
               
chr27:23760069-23760218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
80-234
               

               
Cow position:
               
chr27:16504999-16505148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
81-210
               

               
Cow position:
               
chr27:26317976-26317845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
89-223
               

               
Cow position:
               
chr27:18215262-18215390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
98-234
               

               
Cow position:
               
chr27:24952061-24952194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
127-234
               

               
Cow position:
               
chr27:26315277-26315382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.