Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Mixn-0012m18.5
        

               Conread position:
               1-234
               

               Cow position:
               chrX:23335983-23335748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               2-158
               

               Cow position:
               chrX:38227115-38226960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               2-178
               

               Cow position:
               chrX:1337287-1337122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-188
               

               Cow position:
               chrX:16575101-16575294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               2-223
               

               Cow position:
               chrX:31294585-31294353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-234
               

               Cow position:
               chrX:13177490-13177257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               12, 165
               

               Conread position:
               2-234
               

               Cow position:
               chrX:27446674-27446910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 175
               

               Conread position:
               2-234
               

               Cow position:
               chrX:36283330-36283567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               3-225
               

               Cow position:
               chrX:34420724-34420954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               3-234
               

               Cow position:
               chrX:15545871-15546110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               3-234
               

               Cow position:
               chrX:27668966-27668735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               63, 168
               

               Conread position:
               5-234
               

               Cow position:
               chrX:11656073-11656305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 158
               

               Conread position:
               7-234
               

               Cow position:
               chrX:40035445-40035215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               42, 219
               

               Conread position:
               8-123
               

               Cow position:
               chrX:6213867-6213985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               8-154
               

               Cow position:
               chrX:10305351-10305205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               8-228
               

               Cow position:
               chrX:15147196-15146978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               8-232
               

               Cow position:
               chrX:15820591-15820830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               8-233
               

               Cow position:
               chrX:6559451-6559230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 99
               

               Conread position:
               8-234
               

               Cow position:
               chrX:13913066-13913302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               8-234
               

               Cow position:
               chrX:23561852-23562100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               8-234
               

               Cow position:
               chrX:38218710-38218940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 156
               

               Conread position:
               8-234
               

               Cow position:
               chrX:42492527-42492294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               10, 124
               

               Conread position:
               9-169
               

               Cow position:
               chrX:43730225-43730063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               9-206
               

               Cow position:
               chrX:40283123-40283322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               132, 59
               

               Conread position:
               9-207
               

               Cow position:
               chrX:7336839-7337043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               9-218
               

               Cow position:
               chrX:36975949-36976163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               9-223
               

               Cow position:
               chrX:42282576-42282793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               9-224
               

               Cow position:
               chrX:46032729-46032511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               9-228
               

               Cow position:
               chrX:34315517-34315748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               9-230
               

               Cow position:
               chrX:31729440-31729659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 122
               

               Conread position:
               9-231
               

               Cow position:
               chrX:26881567-26881338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 189
               

               Conread position:
               9-232
               

               Cow position:
               chrX:33654847-33654618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               9-234
               

               Cow position:
               chrX:6488575-6488792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               9-234
               

               Cow position:
               chrX:43008607-43008839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               10-148
               

               Cow position:
               chrX:39126325-39126466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               10-155
               

               Cow position:
               chrX:4043864-4043720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               10-158
               

               Cow position:
               chrX:42160626-42160773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               10-168
               

               Cow position:
               chrX:33639977-33640135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               10-169
               

               Cow position:
               chrX:32978082-32977925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               10-203
               

               Cow position:
               chrX:23188781-23188593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               10-219
               

               Cow position:
               chrX:126771-126968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               10-219
               

               Cow position:
               chrX:34238717-34238935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-221
               

               Cow position:
               chrX:14986152-14985948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               10-221
               

               Cow position:
               chrX:30840539-30840755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 165
               

               Conread position:
               10-224
               

               Cow position:
               chrX:1175983-1175773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               10-224
               

               Cow position:
               chrX:32821028-32821257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               10-227
               

               Cow position:
               chrX:3806681-3806898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 143
               

               Conread position:
               10-231
               

               Cow position:
               chrX:24749087-24749311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               134, 168
               

               Conread position:
               10-231
               

               Cow position:
               chrX:45598605-45598384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               10-232
               

               Cow position:
               chrX:46022774-46023000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 122
               

               Conread position:
               10-233
               

               Cow position:
               chrX:29050249-29050468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               124, 148
               

               Conread position:
               10-233
               

               Cow position:
               chrX:41871066-41871283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               10-234
               

               Cow position:
               chrX:151904-152132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               150, 60
               

               Conread position:
               10-234
               

               Cow position:
               chrX:296398-296619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               10-234
               

               Cow position:
               chrX:3579943-3580172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               10-234
               

               Cow position:
               chrX:7721991-7722201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               10-234
               

               Cow position:
               chrX:9252166-9251936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               10-234
               

               Cow position:
               chrX:22283837-22284066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               10-234
               

               Cow position:
               chrX:22387247-22387016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               141, 63
               

               Conread position:
               10-234
               

               Cow position:
               chrX:25207855-25207634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               10-234
               

               Cow position:
               chrX:40108520-40108286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               10-234
               

               Cow position:
               chrX:42381113-42380885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 199
               

               Conread position:
               10-239
               

               Cow position:
               chrX:11763002-11762779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               11-139
               

               Cow position:
               chrX:1514412-1514288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-148
               

               Cow position:
               chrX:10959395-10959255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-148
               

               Cow position:
               chrX:17662595-17662458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-156
               

               Cow position:
               chrX:31829461-31829313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               11-157
               

               Cow position:
               chrX:11717783-11717634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               11-158
               

               Cow position:
               chrX:22915040-22914892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 96
               

               Conread position:
               11-158
               

               Cow position:
               chrX:25411907-25412055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 117
               

               Conread position:
               11-159
               

               Cow position:
               chrX:7710539-7710388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               11-160
               

               Cow position:
               chrX:18046401-18046548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-166
               

               Cow position:
               chrX:29194232-29194388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               11-167
               

               Cow position:
               chrX:42873387-42873544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               11-168
               

               Cow position:
               chrX:8797256-8797409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-169
               

               Cow position:
               chrX:20743604-20743764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 143
               

               Conread position:
               11-169
               

               Cow position:
               chrX:42235524-42235364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               11-191
               

               Cow position:
               chrX:16416510-16416687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               11-198
               

               Cow position:
               chrX:31252417-31252599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               11-198
               

               Cow position:
               chrX:34502920-34503119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               11-206
               

               Cow position:
               chrX:11859537-11859337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               11-206
               

               Cow position:
               chrX:20678138-20677948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-210
               

               Cow position:
               chrX:34222716-34222916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               62, 97
               

               Conread position:
               11-215
               

               Cow position:
               chrX:46770963-46770754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               11-219
               

               Cow position:
               chrX:12309386-12309173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               11-220
               

               Cow position:
               chrX:1616041-1615845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               11-220
               

               Cow position:
               chrX:19394553-19394768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               11-221
               

               Cow position:
               chrX:4279118-4278905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               69, 120
               

               Conread position:
               11-221
               

               Cow position:
               chrX:5679920-5679716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               158, 41
               

               Conread position:
               11-221
               

               Cow position:
               chrX:10831490-10831267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               11-221
               

               Cow position:
               chrX:11653764-11653981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               11-221
               

               Cow position:
               chrX:16762771-16762982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               11-221
               

               Cow position:
               chrX:32420214-32420425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 108
               

               Conread position:
               11-221
               

               Cow position:
               chrX:42247182-42246967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               11-224
               

               Cow position:
               chrX:5872317-5872549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               11-224
               

               Cow position:
               chrX:34505049-34504836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 119
               

               Conread position:
               11-224
               

               Cow position:
               chrX:35275986-35276203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               11-224
               

               Cow position:
               chrX:42432515-42432297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               11-224
               

               Cow position:
               chrX:42836181-42836398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               11-224
               

               Cow position:
               chrX:43115151-43115366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-226
               

               Cow position:
               chrX:20339891-20339676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               11-226
               

               Cow position:
               chrX:23514015-23513782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               11-227
               

               Cow position:
               chrX:38642249-38642462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               11-228
               

               Cow position:
               chrX:29601828-29601608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               11-228
               

               Cow position:
               chrX:39290359-39290576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               11-229
               

               Cow position:
               chrX:31436474-31436691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               55, 151
               

               Conread position:
               11-229
               

               Cow position:
               chrX:45875392-45875612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               11-230
               

               Cow position:
               chrX:34441448-34441231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               11-231
               

               Cow position:
               chrX:1088140-1087924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               11-231
               

               Cow position:
               chrX:7277911-7278130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 134
               

               Conread position:
               11-231
               

               Cow position:
               chrX:21986290-21986077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 135
               

               Conread position:
               11-231
               

               Cow position:
               chrX:27075051-27074827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               11-231
               

               Cow position:
               chrX:44397015-44397235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               139, 49
               

               Conread position:
               11-232
               

               Cow position:
               chrX:4645913-4645689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 113
               

               Conread position:
               11-232
               

               Cow position:
               chrX:10516253-10516479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               11-232
               

               Cow position:
               chrX:21593287-21593516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               92, 66
               

               Conread position:
               11-232
               

               Cow position:
               chrX:29478724-29478947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               11-232
               

               Cow position:
               chrX:34565286-34565510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               66, 82
               

               Conread position:
               11-232
               

               Cow position:
               chrX:41526522-41526309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               11-232
               

               Cow position:
               chrX:46587822-46588045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               62, 171
               

               Conread position:
               11-233
               

               Cow position:
               chrX:27509022-27508798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               11-233
               

               Cow position:
               chrX:41027159-41027385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               61, 220
               

               Conread position:
               11-234
               

               Cow position:
               chrX:4109189-4109412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               11-234
               

               Cow position:
               chrX:4403311-4403545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:5063251-5063463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               144, 55
               

               Conread position:
               11-234
               

               Cow position:
               chrX:6599782-6599547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:12095774-12095544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:13121938-13122171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:13923864-13924088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 160
               

               Conread position:
               11-234
               

               Cow position:
               chrX:17956693-17956916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               11-234
               

               Cow position:
               chrX:20168558-20168782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 129
               

               Conread position:
               11-234
               

               Cow position:
               chrX:21327911-21328141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:24331777-24332004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               11-234
               

               Cow position:
               chrX:25036987-25037219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:26205448-26205231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               11-234
               

               Cow position:
               chrX:26493004-26493233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               11-234
               

               Cow position:
               chrX:34792311-34792096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               11-234
               

               Cow position:
               chrX:35658800-35659021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               11-234
               

               Cow position:
               chrX:37489719-37489956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               65, 116
               

               Conread position:
               11-234
               

               Cow position:
               chrX:38549445-38549674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               11-234
               

               Cow position:
               chrX:38587843-38587618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 206
               

               Conread position:
               11-234
               

               Cow position:
               chrX:38964108-38964324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               61, 108
               

               Conread position:
               11-234
               

               Cow position:
               chrX:42331278-42331500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 143
               

               Conread position:
               11-234
               

               Cow position:
               chrX:42479833-42480054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               11-234
               

               Cow position:
               chrX:45502145-45502362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 138
               

               Conread position:
               11-235
               

               Cow position:
               chrX:35268866-35269084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               11-237
               

               Cow position:
               chrX:31442829-31442609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               62, 145
               

               Conread position:
               11-237
               

               Cow position:
               chrX:42855458-42855693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               12-147
               

               Cow position:
               chrX:24054672-24054816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-156
               

               Cow position:
               chrX:5900467-5900610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               12-168
               

               Cow position:
               chrX:32623572-32623730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 123
               

               Conread position:
               12-220
               

               Cow position:
               chrX:35278330-35278524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               12-221
               

               Cow position:
               chrX:9651023-9650813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 143
               

               Conread position:
               12-224
               

               Cow position:
               chrX:30962877-30962658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               12-226
               

               Cow position:
               chrX:27228127-27228348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               12-232
               

               Cow position:
               chrX:12290720-12290943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               12-234
               

               Cow position:
               chrX:4269064-4268843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               12-234
               

               Cow position:
               chrX:4632857-4632627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               12-234
               

               Cow position:
               chrX:18204466-18204239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 202
               

               Conread position:
               12-234
               

               Cow position:
               chrX:46072816-46072603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 136
               

               Conread position:
               12-237
               

               Cow position:
               chrX:48236817-48237047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 91
               

               Conread position:
               13-163
               

               Cow position:
               chrX:6690258-6690107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 135
               

               Conread position:
               13-178
               

               Cow position:
               chrX:14599539-14599704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 57
               

               Conread position:
               13-212
               

               Cow position:
               chrX:19965394-19965190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               13-224
               

               Cow position:
               chrX:25049280-25049064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               13-231
               

               Cow position:
               chrX:33000907-33001122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 146
               

               Conread position:
               13-231
               

               Cow position:
               chrX:35383031-35382818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               13-231
               

               Cow position:
               chrX:42927822-42927606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 149
               

               Conread position:
               13-233
               

               Cow position:
               chrX:38967890-38968121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               13-234
               

               Cow position:
               chrX:6267670-6267897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               110, 64
               

               Conread position:
               13-234
               

               Cow position:
               chrX:41238352-41238135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               60, 153
               

               Conread position:
               14-151
               

               Cow position:
               chrX:11073188-11073049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               14-153
               

               Cow position:
               chrX:19943231-19943091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               14-158
               

               Cow position:
               chrX:5679566-5679422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-158
               

               Cow position:
               chrX:6223125-6222977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-162
               

               Cow position:
               chrX:36514890-36514739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 135
               

               Conread position:
               14-168
               

               Cow position:
               chrX:45694306-45694459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               14-169
               

               Cow position:
               chrX:11085060-11084902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 85
               

               Conread position:
               14-197
               

               Cow position:
               chrX:28866000-28865814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               14-198
               

               Cow position:
               chrX:11614701-11614875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-198
               

               Cow position:
               chrX:45968151-45968337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               14-199
               

               Cow position:
               chrX:18964820-18964633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               138, 56
               

               Conread position:
               14-200
               

               Cow position:
               chrX:13382334-13382514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 51
               

               Conread position:
               14-201
               

               Cow position:
               chrX:39180230-39180039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               14-206
               

               Cow position:
               chrX:44660586-44660389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               14-207
               

               Cow position:
               chrX:14275740-14275548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 148
               

               Conread position:
               14-208
               

               Cow position:
               chrX:169542-169340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-214
               

               Cow position:
               chrX:27511431-27511628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               14-219
               

               Cow position:
               chrX:8731097-8731306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-220
               

               Cow position:
               chrX:28878171-28877953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-221
               

               Cow position:
               chrX:4768744-4768942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               14-221
               

               Cow position:
               chrX:37955850-37956059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 200
               

               Conread position:
               14-224
               

               Cow position:
               chrX:1552972-1553187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-224
               

               Cow position:
               chrX:6407549-6407761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               14-224
               

               Cow position:
               chrX:10859309-10859096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               39, 120
               

               Conread position:
               14-224
               

               Cow position:
               chrX:18111381-18111596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-224
               

               Cow position:
               chrX:20151863-20152065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-224
               

               Cow position:
               chrX:44202043-44201828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-224
               

               Cow position:
               chrX:44859860-44859645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-224
               

               Cow position:
               chrX:48071164-48071379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-226
               

               Cow position:
               chrX:7648407-7648193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               14-227
               

               Cow position:
               chrX:21665238-21665016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               14-227
               

               Cow position:
               chrX:32318308-32318520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 106
               

               Conread position:
               14-229
               

               Cow position:
               chrX:13868707-13868926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               14-232
               

               Cow position:
               chrX:4328180-4327957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               14-232
               

               Cow position:
               chrX:11633685-11633907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-232
               

               Cow position:
               chrX:17231738-17231962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-232
               

               Cow position:
               chrX:24336074-24335851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               14-232
               

               Cow position:
               chrX:26979786-26979566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 191
               

               Conread position:
               14-232
               

               Cow position:
               chrX:27175006-27175225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               14-232
               

               Cow position:
               chrX:44339318-44339096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               14-233
               

               Cow position:
               chrX:2935960-2936179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 133
               

               Conread position:
               14-233
               

               Cow position:
               chrX:5118499-5118272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-233
               

               Cow position:
               chrX:38654427-38654206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               135, 63
               

               Conread position:
               14-234
               

               Cow position:
               chrX:161415-161627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               58, 120
               

               Conread position:
               14-234
               

               Cow position:
               chrX:12249808-12250042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               14-234
               

               Cow position:
               chrX:12979831-12979608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:16836283-16836067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:17524381-17524156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:24365818-24365595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               59, 94
               

               Conread position:
               14-234
               

               Cow position:
               chrX:25035379-25035153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:26843266-26843039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 117
               

               Conread position:
               14-234
               

               Cow position:
               chrX:27431915-27431697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               51, 148
               

               Conread position:
               14-234
               

               Cow position:
               chrX:30133315-30133095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               14-234
               

               Cow position:
               chrX:31250391-31250617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:32910107-32910324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               14-234
               

               Cow position:
               chrX:36356115-36356331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:40680617-40680842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               14-234
               

               Cow position:
               chrX:41941626-41941850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 174
               

               Conread position:
               14-234
               

               Cow position:
               chrX:42893927-42894149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               41, 146
               

               Conread position:
               14-234
               

               Cow position:
               chrX:44040184-44040404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 52
               

               Conread position:
               14-234
               

               Cow position:
               chrX:44961754-44961982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               14-237
               

               Cow position:
               chrX:34411849-34412078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               15-158
               

               Cow position:
               chrX:23498673-23498530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-164
               

               Cow position:
               chrX:23562636-23562788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               15-169
               

               Cow position:
               chrX:37129273-37129430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               15-198
               

               Cow position:
               chrX:29733588-29733391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               15-206
               

               Cow position:
               chrX:32574321-32574515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 104
               

               Conread position:
               15-219
               

               Cow position:
               chrX:1499669-1499866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               62, 132
               

               Conread position:
               15-219
               

               Cow position:
               chrX:35885723-35885520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 147
               

               Conread position:
               15-221
               

               Cow position:
               chrX:36866177-36866387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 102
               

               Conread position:
               15-221
               

               Cow position:
               chrX:43150431-43150645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               41, 122
               

               Conread position:
               15-224
               

               Cow position:
               chrX:2674952-2674736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               15-224
               

               Cow position:
               chrX:31948931-31948717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-224
               

               Cow position:
               chrX:40320410-40320624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-224
               

               Cow position:
               chrX:41878927-41878720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               8, 60
               

               Conread position:
               15-226
               

               Cow position:
               chrX:30672392-30672165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-226
               

               Cow position:
               chrX:34543788-34544005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-230
               

               Cow position:
               chrX:47079631-47079850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 207
               

               Conread position:
               15-231
               

               Cow position:
               chrX:27145608-27145823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 147
               

               Conread position:
               15-231
               

               Cow position:
               chrX:46532491-46532266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               15-232
               

               Cow position:
               chrX:5638165-5637954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               15-232
               

               Cow position:
               chrX:12437266-12437058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               15-234
               

               Cow position:
               chrX:4399130-4399345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               15-234
               

               Cow position:
               chrX:4559743-4559961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               15-234
               

               Cow position:
               chrX:6414051-6414259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               15-234
               

               Cow position:
               chrX:17949484-17949265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               15-234
               

               Cow position:
               chrX:20887635-20887422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 153
               

               Conread position:
               15-234
               

               Cow position:
               chrX:32943072-32942853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 195
               

               Conread position:
               15-234
               

               Cow position:
               chrX:35985824-35986042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               16-147
               

               Cow position:
               chrX:29680256-29680122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               16-164
               

               Cow position:
               chrX:31626968-31626821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               16-169
               

               Cow position:
               chrX:16348559-16348410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               136, 49
               

               Conread position:
               16-197
               

               Cow position:
               chrX:4515690-4515878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               16-198
               

               Cow position:
               chrX:17966346-17966524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 138
               

               Conread position:
               16-205
               

               Cow position:
               chrX:39220084-39220284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               16-215
               

               Cow position:
               chrX:41068730-41068928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               57, 146
               

               Conread position:
               16-225
               

               Cow position:
               chrX:14973736-14973539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               16-227
               

               Cow position:
               chrX:23113290-23113512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               16-231
               

               Cow position:
               chrX:1122538-1122323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               16-231
               

               Cow position:
               chrX:15007144-15006935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               16-231
               

               Cow position:
               chrX:42450009-42449789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               16-232
               

               Cow position:
               chrX:24170724-24170500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               16-233
               

               Cow position:
               chrX:31489525-31489747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               16-234
               

               Cow position:
               chrX:15231655-15231432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               16-234
               

               Cow position:
               chrX:27261196-27261417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 196
               

               Conread position:
               16-234
               

               Cow position:
               chrX:27394021-27393791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 206
               

               Conread position:
               16-234
               

               Cow position:
               chrX:40336916-40337138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               16-234
               

               Cow position:
               chrX:44054807-44055030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               16-238
               

               Cow position:
               chrX:19761759-19761980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               57, 153
               

               Conread position:
               17-133
               

               Cow position:
               chrX:37665697-37665816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               17-160
               

               Cow position:
               chrX:29553291-29553438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               17-171
               

               Cow position:
               chrX:6260141-6259985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               17-173
               

               Cow position:
               chrX:17888413-17888256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               149, 57
               

               Conread position:
               17-203
               

               Cow position:
               chrX:1719121-1719304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               17-221
               

               Cow position:
               chrX:41810161-41809961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               17-231
               

               Cow position:
               chrX:38301815-38302038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               17-232
               

               Cow position:
               chrX:25815895-25815674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               17-232
               

               Cow position:
               chrX:27705593-27705812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               17-234
               

               Cow position:
               chrX:7351306-7351528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               140, 198
               

               Conread position:
               17-234
               

               Cow position:
               chrX:19018825-19018601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               17-234
               

               Cow position:
               chrX:36367935-36367707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               17-234
               

               Cow position:
               chrX:48558752-48558973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               18-160
               

               Cow position:
               chrX:29549538-29549400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               18-209
               

               Cow position:
               chrX:19717529-19717716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               19-196
               

               Cow position:
               chrX:25459726-25459541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               57, 150
               

               Conread position:
               19-232
               

               Cow position:
               chrX:35285181-35285399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               19-234
               

               Cow position:
               chrX:16324006-16323788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               149, 55
               

               Conread position:
               20-221
               

               Cow position:
               chrX:28836903-28837098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               20-225
               

               Cow position:
               chrX:9635181-9634974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               20-227
               

               Cow position:
               chrX:40685319-40685109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               20-234
               

               Cow position:
               chrX:16984651-16984862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               21-227
               

               Cow position:
               chrX:11326087-11325888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               22-232
               

               Cow position:
               chrX:19356480-19356689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               23-198
               

               Cow position:
               chrX:23098192-23098018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               49, 92
               

               Conread position:
               23-228
               

               Cow position:
               chrX:8869390-8869183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 149
               

               Conread position:
               23-232
               

               Cow position:
               chrX:40826739-40826525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               23-234
               

               Cow position:
               chrX:38094504-38094299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               24-168
               

               Cow position:
               chrX:47342129-47342275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               24-169
               

               Cow position:
               chrX:753165-753317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               25-158
               

               Cow position:
               chrX:23266429-23266564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               25-221
               

               Cow position:
               chrX:29467764-29467568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               25-221
               

               Cow position:
               chrX:30824001-30824199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               25-221
               

               Cow position:
               chrX:34837050-34836858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 137
               

               Conread position:
               25-224
               

               Cow position:
               chrX:3494808-3494604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               25-232
               

               Cow position:
               chrX:17292969-17293181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               25-232
               

               Cow position:
               chrX:40574928-40574718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               25-234
               

               Cow position:
               chrX:9201562-9201770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 136
               

               Conread position:
               25-234
               

               Cow position:
               chrX:20957252-20957464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 201
               

               Conread position:
               25-234
               

               Cow position:
               chrX:23088870-23089062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               26-234
               

               Cow position:
               chrX:907961-908168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               52, 100
               

               Conread position:
               27-231
               

               Cow position:
               chrX:6544273-6544469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               27-234
               

               Cow position:
               chrX:31479987-31480193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 142
               

               Conread position:
               28-234
               

               Cow position:
               chrX:5026273-5026478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               30-219
               

               Cow position:
               chrX:20345472-20345663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               30-228
               

               Cow position:
               chrX:1466181-1466384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               30-246
               

               Cow position:
               chrX:28940261-28940483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 133
               

               Conread position:
               31-232
               

               Cow position:
               chrX:28067870-28068076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               31-234
               

               Cow position:
               chrX:41454934-41454726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               32-224
               

               Cow position:
               chrX:35681587-35681784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               34-205
               

               Cow position:
               chrX:13647762-13647586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               34-234
               

               Cow position:
               chrX:32877352-32877152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               34-234
               

               Cow position:
               chrX:37072412-37072613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 138
               

               Conread position:
               35-176
               

               Cow position:
               chrX:37062561-37062416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               35-234
               

               Cow position:
               chrX:8642070-8642272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               35-234
               

               Cow position:
               chrX:16763903-16763703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               35-235
               

               Cow position:
               chrX:32866899-32867098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               38-223
               

               Cow position:
               chrX:19795477-19795294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               6, 10
               

               Conread position:
               38-232
               

               Cow position:
               chrX:1960398-1960200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               39-234
               

               Cow position:
               chrX:40648924-40649129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               39-238
               

               Cow position:
               chrX:44995528-44995733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               41-158
               

               Cow position:
               chrX:29563052-29562936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               41-219
               

               Cow position:
               chrX:36722775-36722601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               36, 107
               

               Conread position:
               41-221
               

               Cow position:
               chrX:31986544-31986358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               41-231
               

               Cow position:
               chrX:8326934-8327129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               41-234
               

               Cow position:
               chrX:7911042-7910846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               41-234
               

               Cow position:
               chrX:23359081-23358890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               41-238
               

               Cow position:
               chrX:41453332-41453530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 135
               

               Conread position:
               42-165
               

               Cow position:
               chrX:27667456-27667582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               42-234
               

               Cow position:
               chrX:34314055-34314248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               43-221
               

               Cow position:
               chrX:37749951-37749778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               43-226
               

               Cow position:
               chrX:11781285-11781466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               43-232
               

               Cow position:
               chrX:2314587-2314393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               43-232
               

               Cow position:
               chrX:14925308-14925498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               43-232
               

               Cow position:
               chrX:46909847-46910033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               43-234
               

               Cow position:
               chrX:51864-51675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               43-234
               

               Cow position:
               chrX:4091956-4092149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 173
               

               Conread position:
               43-234
               

               Cow position:
               chrX:34398752-34398556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               43-234
               

               Cow position:
               chrX:48822310-48822115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               44-224
               

               Cow position:
               chrX:17498355-17498540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               44-234
               

               Cow position:
               chrX:597441-597251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               45-216
               

               Cow position:
               chrX:28850761-28850927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               45-232
               

               Cow position:
               chrX:11454220-11454399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               45-235
               

               Cow position:
               chrX:23136776-23136959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               46-234
               

               Cow position:
               chrX:41790394-41790200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               48-234
               

               Cow position:
               chrX:16556180-16555996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               25, 65
               

               Conread position:
               48-234
               

               Cow position:
               chrX:42760289-42760480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               49-234
               

               Cow position:
               chrX:37752068-37751882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               52-232
               

               Cow position:
               chrX:46068718-46068539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               53-228
               

               Cow position:
               chrX:27415538-27415367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 114
               

               Conread position:
               53-228
               

               Cow position:
               chrX:45759713-45759890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 119
               

               Conread position:
               53-231
               

               Cow position:
               chrX:6640473-6640648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               53-234
               

               Cow position:
               chrX:5487893-5487721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               53-234
               

               Cow position:
               chrX:35409794-35409979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               54-198
               

               Cow position:
               chrX:40056170-40056027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               54-224
               

               Cow position:
               chrX:34270606-34270778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               54-227
               

               Cow position:
               chrX:25286678-25286501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               54-231
               

               Cow position:
               chrX:29230044-29230231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               54-231
               

               Cow position:
               chrX:47191272-47191098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               54-232
               

               Cow position:
               chrX:8759670-8759848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               54-234
               

               Cow position:
               chrX:5097756-5097567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               23, 169
               

               Conread position:
               54-234
               

               Cow position:
               chrX:6389124-6389306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               54-234
               

               Cow position:
               chrX:20583711-20583887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 115
               

               Conread position:
               54-234
               

               Cow position:
               chrX:23471821-23471641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               54-234
               

               Cow position:
               chrX:27442496-27442311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               54-234
               

               Cow position:
               chrX:29451508-29451318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               54-234
               

               Cow position:
               chrX:33855174-33854999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               55-234
               

               Cow position:
               chrX:23497643-23497470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               55-234
               

               Cow position:
               chrX:34376988-34377166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               55-234
               

               Cow position:
               chrX:42875256-42875436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               56-232
               

               Cow position:
               chrX:31983538-31983353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               57-198
               

               Cow position:
               chrX:21288558-21288414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               57-232
               

               Cow position:
               chrX:42461572-42461402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               57-234
               

               Cow position:
               chrX:10415207-10415025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               57-234
               

               Cow position:
               chrX:37867301-37867481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               59-199
               

               Cow position:
               chrX:40543471-40543336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               59-224
               

               Cow position:
               chrX:37867484-37867650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               60-234
               

               Cow position:
               chrX:11589315-11589140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               61-218
               

               Cow position:
               chrX:25049048-25048891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               63-228
               

               Cow position:
               chrX:42086882-42087047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 148
               

               Conread position:
               63-234
               

               Cow position:
               chrX:39642567-39642401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               66-234
               

               Cow position:
               chrX:41215380-41215550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               67-227
               

               Cow position:
               chrX:11529402-11529558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               68-198
               

               Cow position:
               chrX:30042031-30041901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-231
               

               Cow position:
               chrX:27202630-27202793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-233
               

               Cow position:
               chrX:41858822-41858658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               68-234
               

               Cow position:
               chrX:11602423-11602260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               103, 16
               

               Conread position:
               70-221
               

               Cow position:
               chrX:4366402-4366559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               70-228
               

               Cow position:
               chrX:40556397-40556242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               54, 102
               

               Conread position:
               70-232
               

               Cow position:
               chrX:4169969-4169803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               70-234
               

               Cow position:
               chrX:14135740-14135902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               71-221
               

               Cow position:
               chrX:10237850-10237699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               86, 71
               

               Conread position:
               71-231
               

               Cow position:
               chrX:23485584-23485754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               71-232
               

               Cow position:
               chrX:12813-12968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               71-232
               

               Cow position:
               chrX:26882017-26881854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               71-233
               

               Cow position:
               chrX:22552916-22552753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               71-234
               

               Cow position:
               chrX:1938077-1938240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-234
               

               Cow position:
               chrX:4750269-4750111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               71-234
               

               Cow position:
               chrX:6480533-6480368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               71-234
               

               Cow position:
               chrX:17525804-17525650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               71-234
               

               Cow position:
               chrX:32747795-32747947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               71-234
               

               Cow position:
               chrX:34991427-34991588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               72-225
               

               Cow position:
               chrX:47431474-47431326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               72-231
               

               Cow position:
               chrX:3494981-3494826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               72-234
               

               Cow position:
               chrX:9451409-9451568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               74-206
               

               Cow position:
               chrX:24633761-24633893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-228
               

               Cow position:
               chrX:41166759-41166608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               74-234
               

               Cow position:
               chrX:33466690-33466849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 135
               

               Conread position:
               79-233
               

               Cow position:
               chrX:28106918-28107072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-234
               

               Cow position:
               chrX:33678402-33678243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               80-234
               

               Cow position:
               chrX:45657868-45657708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               81-231
               

               Cow position:
               chrX:4486951-4486800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               83-232
               

               Cow position:
               chrX:1571514-1571371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               84-232
               

               Cow position:
               chrX:11670762-11670912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-232
               

               Cow position:
               chrX:35509598-35509455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-234
               

               Cow position:
               chrX:17929082-17929225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               90-221
               

               Cow position:
               chrX:43028314-43028443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               91-234
               

               Cow position:
               chrX:31279841-31279700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               94-224
               

               Cow position:
               chrX:1996366-1996234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               94-234
               

               Cow position:
               chrX:9367402-9367543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               63, 115
               

               Conread position:
               107-234
               

               Cow position:
               chrX:15534113-15533983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               117-231
               

               Cow position:
               chrX:10479858-10479974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               131-234
               

               Cow position:
               chrX:42220579-42220474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-234
Cow position:	chrX:23335983-23335748 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	175
Alignm E-value:	6e-39
Alignm gaps (pig, cow):	14, 74
Conread position:	2-158
Cow position:	chrX:38227115-38226960 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	116
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	73, 20
Conread position:	2-178
Cow position:	chrX:1337287-1337122 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	134
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	15, 0
Conread position:	2-188
Cow position:	chrX:16575101-16575294 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	138
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	13, 0
Conread position:	2-223
Cow position:	chrX:31294585-31294353 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	176
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	14, 0
Conread position:	2-234
Cow position:	chrX:13177490-13177257 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	172
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	12, 165
Conread position:	3-225
Cow position:	chrX:34420724-34420954 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	165
Alignm E-value:	9e-32
Alignm gaps (pig, cow):	8, 0
Conread position:	3-234
Cow position:	chrX:15545871-15546110 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	174
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	13, 131
Conread position:	5-234
Cow position:	chrX:11656073-11656305 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	183
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 158
Conread position:	7-234
Cow position:	chrX:40035445-40035215 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	171
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	42, 219
Conread position:	8-123
Cow position:	chrX:6213867-6213985 (view UCSC Genome Browser custom track)
Alignm length:	119
Alignm identity:	95
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	67, 0
Conread position:	8-154
Cow position:	chrX:10305351-10305205 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	111
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	11, 66
Conread position:	8-228
Cow position:	chrX:15147196-15146978 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	162
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	141, 60
Conread position:	8-232
Cow position:	chrX:15820591-15820830 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	178
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	7, 79
Conread position:	8-233
Cow position:	chrX:6559451-6559230 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	165
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	65, 99
Conread position:	8-234
Cow position:	chrX:13913066-13913302 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	163
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	8, 133
Conread position:	9-169
Cow position:	chrX:43730225-43730063 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	124
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	65, 40
Conread position:	9-206
Cow position:	chrX:40283123-40283322 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	137
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	132, 59
Conread position:	9-207
Cow position:	chrX:7336839-7337043 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	115
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	64, 0
Conread position:	9-218
Cow position:	chrX:36975949-36976163 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	151
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	7, 35