Cow genome map


           Conread name:
           Ss1.1-Mixn-0021i19.5
        

               Conread position:
               500-1283
               

               Cow position:
               
               

               Alignm length:
               789
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               502-704
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               502-1242
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               735, 715
               

               Conread position:
               502-1247
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               449
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 54
               

               Conread position:
               503-1212
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 219
               

               Conread position:
               503-1240
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               463, 472
               

               Conread position:
               503-1247
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               378, 394
               

               Conread position:
               503-1247
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 227
               

               Conread position:
               503-1247
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               504-987
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               504-998
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               305
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-1069
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-1079
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 227
               

               Conread position:
               504-1153
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 27
               

               Conread position:
               504-1164
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 143
               

               Conread position:
               504-1208
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-1222
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               419
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               104, 100
               

               Conread position:
               504-1239
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               686, 692
               

               Conread position:
               504-1240
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-1247
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 214
               

               Conread position:
               504-1247
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               434
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               377, 386
               

               Conread position:
               504-1247
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               429
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 153
               

               Conread position:
               505-1240
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               505-1247
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 204
               

               Conread position:
               506-1247
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               512-718
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               139, 144
               

               Conread position:
               514-828
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               514-832
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               514-1247
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               515-1153
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               518-1247
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               519-828
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               519-987
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 138
               

               Conread position:
               519-1082
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 115
               

               Conread position:
               520-996
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               520-1163
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               520-1247
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 125
               

               Conread position:
               520-1247
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 208
               

               Conread position:
               522-1239
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 284
               

               Conread position:
               522-1242
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               523-1089
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 134
               

               Conread position:
               523-1247
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 136
               

               Conread position:
               532-756
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 124
               

               Conread position:
               533-873
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               533-1239
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               534-1247
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               535-1243
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 180
               

               Conread position:
               543-1085
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 174
               

               Conread position:
               560-1249
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 249
               

               Conread position:
               562-1218
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               570-1247
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               393
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               573-1173
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               348
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               573-1212
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               573-1247
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 86
               

               Conread position:
               573-1247
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               574-1247
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 83
               

               Conread position:
               579-1005
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               268
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-957
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               641-1247
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 15
               

               Conread position:
               670-1236
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               673-1079
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               208, 217
               

               Conread position:
               674-1054
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               707-1212
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 179
               

               Conread position:
               748-1163
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               396, 400
               

               Conread position:
               751-1249
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               399, 393
               

               Conread position:
               774-1123
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               347, 0
               

               Conread position:
               806-1247
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               161, 168
               

               Conread position:
               837-1209
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               837-1247
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               146, 139
               

               Conread position:
               858-1247
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               892-1248
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               283, 291
               

               Conread position:
               917-1312
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               255, 81
               

               Conread position:
               941-1242
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               275, 282
               
Show alignments to all cow chromosomes.