Cow genome map
| Conread name: | Ss1.1-Mixn-0021n04.5 |
| Conread position: | 4-196 |
| Cow position: | chr10:9031472-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-314 |
| Cow position: | chr10:9010347-9010039 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-266 |
| Cow position: | chr10:9010092-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 153, 158 |
| Conread position: | 9-280 |
| Cow position: | chr10:9031393-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-288 |
| Cow position: | chr10:8996280-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-302 |
| Cow position: | chr10:8996868-8996575 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 9-314 |
| Cow position: | chr10:9010428-9010123 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 162, 146 |
| Conread position: | 9-322 |
| Cow position: | chr10:8996532-8996218 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 237 |
| Conread position: | 9-322 |
| Cow position: | chr10:9010176-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 146 |
| Conread position: | 10-299 |
| Cow position: | chr10:9031310-9031599 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-314 |
| Cow position: | chr10:8996615-8996311 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-314 |
| Cow position: | chr10:21938847-21938538 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 214, 95 |
| Conread position: | 10-314 |
| Cow position: | chr10:21939099-21938795 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 164, 175 |
| Conread position: | 10-322 |
| Cow position: | chr10:8996699-8996386 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 0 |
| Conread position: | 10-325 |
| Cow position: | chr10:9010511-9010195 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 145 |
| Conread position: | 10-328 |
| Cow position: | chr10:8996447-8996128 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 149 |
| Conread position: | 10-328 |
| Cow position: | chr10:9010259-9009940 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 159, 145 |
| Conread position: | 10-338 |
| Cow position: | chr10:8996783-8996454 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 0 |
| Conread position: | 10-343 |
| Cow position: | chr10:8996363-8996030 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 322 |
| Conread position: | 12-313 |
| Cow position: | chr10:9031228-9031529 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 14-314 |
| Cow position: | chr10:9010591-9010291 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 19-329 |
| Cow position: | chr10:21939174-21938862 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 137 |
| Conread position: | 22-303 |
| Cow position: | chr10:21938919-21938641 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 159, 167 |
| Conread position: | 54-238 |
| Cow position: | chr10:9031671-9031856 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 66-341 |
| Cow position: | chr10:9031198-9031474 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 99 |
| Conread position: | 67-325 |
| Cow position: | chr10:8996894-8996635 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 92 |
Show alignments to all cow chromosomes.