Cow genome map
| Conread name: | Ss1.1-Mixn-0021n04.5 |
| Conread position: | 4-219 |
| Cow position: | chr13:56291974-56291758 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 8-314 |
| Cow position: | chr13:56333692-56333997 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 162, 153 |
| Conread position: | 8-329 |
| Cow position: | chr13:39983876-39984198 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 305, 0 |
| Conread position: | 9-206 |
| Cow position: | chr13:56334122-56334319 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 170 |
| Conread position: | 9-279 |
| Cow position: | chr13:39984633-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-295 |
| Cow position: | chr13:39930709-39930995 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 9-295 |
| Cow position: | chr13:39930793-39931079 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 152, 160 |
| Conread position: | 9-302 |
| Cow position: | chr13:39984465-39984758 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 208, 212 |
| Conread position: | 9-310 |
| Cow position: | chr13:39930877-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 9-313 |
| Cow position: | chr13:39984129-39984434 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 9-314 |
| Cow position: | chr13:39984213-39984518 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 292, 299 |
| Conread position: | 9-314 |
| Cow position: | chr13:39984549-39984854 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-314 |
| Cow position: | chr13:56333945-56334259 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 111, 159 |
| Conread position: | 9-321 |
| Cow position: | chr13:39984297-39984610 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 9-321 |
| Cow position: | chr13:39984381-39984694 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 212 |
| Conread position: | 9-327 |
| Cow position: | chr13:39984045-39984364 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 9-332 |
| Cow position: | chr13:56317929-56318255 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 10-302 |
| Cow position: | chr13:56333526-56333818 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 10-323 |
| Cow position: | chr13:56292293-56291990 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 10-328 |
| Cow position: | chr13:56292136-56291816 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 229, 238 |
| Conread position: | 11-267 |
| Cow position: | chr13:56292718-56292462 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 13-295 |
| Cow position: | chr13:39930629-39930911 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 81, 77 |
| Conread position: | 19-314 |
| Cow position: | chr13:39983971-39984266 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-292 |
| Cow position: | chr13:56334059-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 34-300 |
| Cow position: | chr13:56292193-56291930 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 80-314 |
| Cow position: | chr13:39983864-39984098 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.