Cow genome map

Conread name: Ss1.1-Mixn-0021n04.5

Conread position: 3-299
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-302
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-314
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-239
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 68

Conread position: 4-313
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-314
Cow position:
Alignm length: 312
Alignm identity: 199
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 64

Conread position: 4-314
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 82, 70

Conread position: 4-314
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 67

Conread position: 5-314
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 143, 160

Conread position: 6-267
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 238

Conread position: 6-314
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-314
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 160, 153

Conread position: 6-314
Cow position:
Alignm length: 309
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-319
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 66

Conread position: 7-322
Cow position:
Alignm length: 317
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 306, 0

Conread position: 8-195
Cow position:
Alignm length: 188
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-205
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 9-302
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 162, 150

Conread position: 9-311
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 156

Conread position: 9-314
Cow position:
Alignm length: 308
Alignm identity: 191
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 170, 157

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 192
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 9-314
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 223, 234

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-314
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 9-314
Cow position:
Alignm length: 308
Alignm identity: 196
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 66

Conread position: 9-314
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 65

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 192
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 9-314
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 151

Conread position: 9-314
Cow position:
Alignm length: 307
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 224, 230

Conread position: 9-314
Cow position:
Alignm length: 309
Alignm identity: 199
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 86, 73

Conread position: 9-319
Cow position:
Alignm length: 311
Alignm identity: 199
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 9-323
Cow position:
Alignm length: 317
Alignm identity: 212
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 300, 0

Conread position: 9-324
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 248, 241

Conread position: 9-325
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 300, 0

Conread position: 9-329
Cow position:
Alignm length: 322
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 29

Conread position: 10-174
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-200
Cow position:
Alignm length: 191
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-237
Cow position:
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 58

Conread position: 10-237
Cow position:
Alignm length: 230
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 147

Conread position: 10-264
Cow position:
Alignm length: 255
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-267
Cow position:
Alignm length: 258
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-284
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 169

Conread position: 10-293
Cow position:
Alignm length: 284
Alignm identity: 184
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 10-299
Cow position:
Alignm length: 291
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 259, 265

Conread position: 10-299
Cow position:
Alignm length: 290
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-299
Cow position:
Alignm length: 290
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 10-300
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-300
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-300
Cow position:
Alignm length: 291
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 10-300
Cow position:
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 162, 169

Conread position: 10-302
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 174, 181

Conread position: 10-303
Cow position:
Alignm length: 294
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-311
Cow position:
Alignm length: 304
Alignm identity: 193
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 162, 152

Conread position: 10-311
Cow position:
Alignm length: 302
Alignm identity: 192
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 10-313
Cow position:
Alignm length: 306
Alignm identity: 196
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 79

Conread position: 10-314
Cow position:
Alignm length: 306
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 169, 152

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 197
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position:
Alignm length: 306
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 231, 237

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position:
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 41

Conread position: 10-314
Cow position:
Alignm length: 308
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 82

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position:
Alignm length: 305
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-321
Cow position:
Alignm length: 314
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 32

Conread position: 10-322
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 299, 0

Conread position: 10-322
Cow position:
Alignm length: 314
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 299, 0

Conread position: 10-322
Cow position:
Alignm length: 315
Alignm identity: 192
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 160, 153

Conread position: 10-324
Cow position:
Alignm length: 316
Alignm identity: 198
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 303, 0

Conread position: 10-324
Cow position:
Alignm length: 317
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 169, 156

Conread position: 10-324
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 299, 0

Conread position: 10-325
Cow position:
Alignm length: 317
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 303, 0

Conread position: 10-325
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 73

Conread position: 10-328
Cow position:
Alignm length: 323
Alignm identity: 206
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 81

Conread position: 10-328
Cow position:
Alignm length: 323
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 74

Conread position: 10-328
Cow position:
Alignm length: 321
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 151

Conread position: 10-328
Cow position:
Alignm length: 322
Alignm identity: 204
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 80

Conread position: 10-328
Cow position:
Alignm length: 320
Alignm identity: 199
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 299, 0

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 253, 230

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 253, 243

Conread position: 10-337
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 303, 0

Conread position: 10-338
Cow position:
Alignm length: 331
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 212, 208

Conread position: 10-339
Cow position:
Alignm length: 335
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 181

Conread position: 11-314
Cow position:
Alignm length: 306
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 20

Conread position: 14-322
Cow position:
Alignm length: 310
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 295, 0

Conread position: 16-314
Cow position:
Alignm length: 302
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 55

Conread position: 16-325
Cow position:
Alignm length: 311
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 293, 0

Conread position: 17-339
Cow position:
Alignm length: 325
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 296, 314

Conread position: 19-314
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 22-240
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 146

Conread position: 22-267
Cow position:
Alignm length: 247
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 28

Conread position: 22-280
Cow position:
Alignm length: 259
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-293
Cow position:
Alignm length: 274
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 25

Conread position: 22-300
Cow position:
Alignm length: 279
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 22-302
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 104, 273

Conread position: 22-307
Cow position:
Alignm length: 286
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 22-314
Cow position:
Alignm length: 295
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 120

Conread position: 22-314
Cow position:
Alignm length: 295
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 22-314
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 210, 214

Conread position: 22-314
Cow position:
Alignm length: 293
Alignm identity: 178
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-322
Cow position:
Alignm length: 303
Alignm identity: 199
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 52, 61

Conread position: 22-322
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 229, 220

Conread position: 22-325
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 162, 169

Conread position: 22-325
Cow position:
Alignm length: 305
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 291, 0

Conread position: 22-328
Cow position:
Alignm length: 308
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 287, 0

Conread position: 27-322
Cow position:
Alignm length: 297
Alignm identity: 188
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 282, 9

Conread position: 30-310
Cow position:
Alignm length: 281
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 74-314
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 85-314
Cow position:
Alignm length: 230
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 99-275
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.