Cow genome map


           Conread name:
           Ss1.1-Mixn-0021n04.5
        

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               4-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               153, 165
               

               Conread position:
               5-185
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 85
               

               Conread position:
               5-203
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               89, 85
               

               Conread position:
               5-254
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 241
               

               Conread position:
               5-321
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               165, 151
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 93
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               304, 177
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               6-294
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               6-302
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               116, 104
               

               Conread position:
               6-302
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 240
               

               Conread position:
               6-314
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 0
               

               Conread position:
               6-314
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               165, 156
               

               Conread position:
               6-314
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               165, 42
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 159
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 78
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 162
               

               Conread position:
               7-301
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               166, 159
               

               Conread position:
               7-314
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 163
               

               Conread position:
               7-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 0
               

               Conread position:
               8-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               147, 161
               

               Conread position:
               8-325
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 0
               

               Conread position:
               9-205
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               166, 147
               

               Conread position:
               9-205
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               9-206
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-238
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-299
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-299
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               85, 81
               

               Conread position:
               9-300
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               9-301
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-301
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 160
               

               Conread position:
               9-302
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               159, 58
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               208, 212
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 157
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               296, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               148, 160
               

               Conread position:
               9-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 0
               

               Conread position:
               9-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               300, 20
               

               Conread position:
               9-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               9-328
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               9-340
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               213, 208
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               249, 231
               

               Conread position:
               10-292
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               148, 155
               

               Conread position:
               10-302
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               84, 73
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 156
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 155
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-322
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 258
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 0
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               158, 146
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               302, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 0
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               158, 146
               

               Conread position:
               10-341
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               10-341
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 0
               

               Conread position:
               11-299
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               13-299
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               13-338
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               13-350
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               300, 319
               

               Conread position:
               15-314
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-314
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-314
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-315
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               266, 0
               

               Conread position:
               16-322
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               16-334
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 309
               

               Conread position:
               17-302
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 61
               

               Conread position:
               20-314
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               21-311
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               22-324
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               147, 135
               

               Conread position:
               28-314
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               30-325
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 0
               

               Conread position:
               67-314
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               85-314
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.