Cow genome map


           Conread name:
           Ss1.1-Mixn-0021n04.5
        

               Conread position:
               7-292
               

               Cow position:
               chr21:12608617-12608332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 83
               

               Conread position:
               9-314
               

               Cow position:
               chr21:12608699-12608394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               164, 157
               

               Conread position:
               9-338
               

               Cow position:
               chr21:34222989-34222660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 81
               

               Conread position:
               10-289
               

               Cow position:
               chr21:34222820-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               165, 157
               

               Conread position:
               10-299
               

               Cow position:
               chr21:12608278-12607989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               10-314
               

               Cow position:
               chr21:12608530-12608226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               chr21:34223072-34222768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               163, 148
               

               Conread position:
               16-293
               

               Cow position:
               chr21:12608860-12608583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               85, 74
               

               Conread position:
               16-328
               

               Cow position:
               chr21:12608776-12608463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               216, 220
               
Show alignments to all cow chromosomes.