Cow genome map

Conread name: Ss1.1-Mixn-0021n04.5

Conread position: 3-311
Cow position:
Alignm length: 309
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 4-206
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-301
Cow position:
Alignm length: 299
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 203, 211

Conread position: 4-310
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 229, 241

Conread position: 4-314
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-205
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-207
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-267
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-299
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 92

Conread position: 5-314
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-321
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 5-327
Cow position:
Alignm length: 324
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 6-314
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-314
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 71

Conread position: 6-325
Cow position:
Alignm length: 321
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 307, 0

Conread position: 9-185
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-236
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 62

Conread position: 9-238
Cow position:
Alignm length: 230
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-238
Cow position:
Alignm length: 231
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 200, 0

Conread position: 9-288
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 276, 0

Conread position: 9-288
Cow position:
Alignm length: 280
Alignm identity: 182
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 9-300
Cow position:
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 62

Conread position: 9-302
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 9-302
Cow position:
Alignm length: 295
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 269, 279

Conread position: 9-308
Cow position:
Alignm length: 302
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 180, 201

Conread position: 9-314
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 182, 149

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-314
Cow position:
Alignm length: 306
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 9-320
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 300, 0

Conread position: 9-321
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 102, 110

Conread position: 9-328
Cow position:
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 9-328
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 9-328
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 300, 0

Conread position: 9-328
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 68

Conread position: 9-329
Cow position:
Alignm length: 322
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 307, 0

Conread position: 10-267
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 153, 157

Conread position: 10-289
Cow position:
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 10-320
Cow position:
Alignm length: 315
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 28

Conread position: 10-320
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 10-324
Cow position:
Alignm length: 317
Alignm identity: 211
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 28

Conread position: 10-325
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 299, 0

Conread position: 10-326
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 303, 0

Conread position: 10-327
Cow position:
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 10-328
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 0

Conread position: 10-328
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 299, 0

Conread position: 10-328
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 303, 0

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 197, 205

Conread position: 11-321
Cow position:
Alignm length: 315
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 184, 192

Conread position: 14-341
Cow position:
Alignm length: 329
Alignm identity: 218
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 295, 0

Conread position: 15-298
Cow position:
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 15-314
Cow position:
Alignm length: 301
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 67

Conread position: 15-328
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 294, 0

Conread position: 22-325
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 204, 217

Conread position: 25-314
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 241, 250

Conread position: 25-322
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 284, 0

Conread position: 29-314
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 29-329
Cow position:
Alignm length: 302
Alignm identity: 194
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 284, 0

Conread position: 30-314
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-315
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 30-322
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 0

Conread position: 31-325
Cow position:
Alignm length: 297
Alignm identity: 187
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 244, 27

Conread position: 39-311
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 85-314
Cow position:
Alignm length: 230
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 123-322
Cow position:
Alignm length: 201
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 186, 0

Show alignments to all cow chromosomes.