Cow genome map
| Conread name: | Ss1.1-Mixn-0021n04.5 |
| Conread position: | 3-329 |
| Cow position: | chr24:17036490-17036163 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 0 |
| Conread position: | 4-327 |
| Cow position: | chr24:17070600-17070924 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 5-299 |
| Cow position: | chr24:17035900-17035606 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 5-300 |
| Cow position: | chr24:17013222-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 281, 0 |
| Conread position: | 5-307 |
| Cow position: | chr24:17036068-17035766 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-314 |
| Cow position: | chr24:17035396-17035087 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 85 |
| Conread position: | 5-314 |
| Cow position: | chr24:17077951-17077642 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 85 |
| Conread position: | 5-325 |
| Cow position: | chr24:17035648-17035327 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 5-325 |
| Cow position: | chr24:17036320-17035999 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 5-328 |
| Cow position: | chr24:17078119-17077795 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 8-300 |
| Cow position: | chr24:17035225-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 278, 0 |
| Conread position: | 9-300 |
| Cow position: | chr24:17035476-17035185 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-322 |
| Cow position: | chr24:17036148-17035834 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 9-324 |
| Cow position: | chr24:17070437-17070753 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 9-324 |
| Cow position: | chr24:17078031-17077715 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 9-325 |
| Cow position: | chr24:17035560-17035243 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 9-328 |
| Cow position: | chr24:17035980-17035660 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 150 |
| Conread position: | 9-328 |
| Cow position: | chr24:17036232-17035912 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 266 |
| Conread position: | 9-328 |
| Cow position: | chr24:17036400-17036080 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 9-328 |
| Cow position: | chr24:17077863-17077543 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 9-329 |
| Cow position: | chr24:17078283-17077962 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 9-341 |
| Cow position: | chr24:17035728-17035395 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 323 |
| Conread position: | 9-341 |
| Cow position: | chr24:17070521-17070854 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 304, 322 |
| Conread position: | 10-291 |
| Cow position: | chr24:17035307-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 273, 269 |
| Conread position: | 10-295 |
| Cow position: | chr24:17070774-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-299 |
| Cow position: | chr24:17070690-17070979 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-325 |
| Cow position: | chr24:17036564-17036251 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 15 |
| Conread position: | 10-325 |
| Cow position: | chr24:17077778-17077463 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 80 |
| Conread position: | 10-328 |
| Cow position: | chr24:17035811-17035492 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 299, 0 |
| Conread position: | 13-248 |
| Cow position: | chr24:16986412-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 55 |
| Conread position: | 53-314 |
| Cow position: | chr24:17070399-17070658 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 55-328 |
| Cow position: | chr24:17013188-17013462 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 55-328 |
| Cow position: | chr24:17078153-17077879 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 254, 0 |
| Conread position: | 98-314 |
| Cow position: | chr24:17013147-17013363 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.