Cow genome map


           Conread name:
           Ss1.1-Mixn-0021n04.5
        

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 0
               

               Conread position:
               4-327
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 0
               

               Conread position:
               5-299
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               281, 0
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 85
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               8-300
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               9-300
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-324
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-324
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               9-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-328
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 150
               

               Conread position:
               9-328
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 266
               

               Conread position:
               9-328
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               159, 150
               

               Conread position:
               9-328
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               9-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               9-341
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 323
               

               Conread position:
               9-341
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               304, 322
               

               Conread position:
               10-291
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               273, 269
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-299
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-325
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 15
               

               Conread position:
               10-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 80
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               13-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 55
               

               Conread position:
               53-314
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               55-328
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               55-328
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               254, 0
               

               Conread position:
               98-314
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.