Cow genome map
| Conread name: | Ss1.1-Mixn-0021n04.5 |
| Conread position: | 4-321 |
| Cow position: | chr6:49341049-49341367 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 77 |
| Conread position: | 4-323 |
| Cow position: | chr6:49340629-49340949 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 4-323 |
| Cow position: | chr6:49340965-49341285 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 0 |
| Conread position: | 4-328 |
| Cow position: | chr6:49340461-49340786 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 4-338 |
| Cow position: | chr6:49340881-49341216 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 4-660 |
| Cow position: | chr6:49341133-49341776 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 485, 320 |
| Conread position: | 5-341 |
| Cow position: | chr6:49340798-49341135 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 6-300 |
| Cow position: | chr6:49396352-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-314 |
| Cow position: | chr6:49396607-49396912 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 9-328 |
| Cow position: | chr6:49429130-49429450 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 296, 0 |
| Conread position: | 9-341 |
| Cow position: | chr6:49340718-49341051 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 323 |
| Conread position: | 10-314 |
| Cow position: | chr6:49396272-49396576 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-314 |
| Cow position: | chr6:49396440-49396744 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-328 |
| Cow position: | chr6:49396194-49396507 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 222, 37 |
| Conread position: | 10-328 |
| Cow position: | chr6:49396524-49396843 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 306, 0 |
| Conread position: | 10-344 |
| Cow position: | chr6:49340551-49340886 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 71 |
| Conread position: | 15-328 |
| Cow position: | chr6:49340388-49340702 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 73-341 |
| Cow position: | chr6:49340362-49340631 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 262 |
Show alignments to all cow chromosomes.