Cow genome map


           Conread name:
           Ss1.1-Mixn-0021n04.5
        

               Conread position:
               3-153
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 87
               

               Conread position:
               5-277
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-301
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               297, 0
               

               Conread position:
               5-327
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               55, 63
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 164
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               6-193
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-301
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               6-302
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               6-314
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               7-238
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               172, 150
               

               Conread position:
               7-327
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               8-236
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 67
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               86, 81
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               301, 0
               

               Conread position:
               8-334
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               301, 324
               

               Conread position:
               9-204
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               145, 113
               

               Conread position:
               9-209
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-237
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 160
               

               Conread position:
               9-300
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               9-302
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               150, 170
               

               Conread position:
               9-303
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               87, 75
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               86, 71
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               150, 161
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               9-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-321
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               86, 66
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               246, 137
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               224, 238
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               9-323
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 59
               

               Conread position:
               9-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-328
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 0
               

               Conread position:
               9-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               9-336
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 323
               

               Conread position:
               9-338
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 74
               

               Conread position:
               10-277
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               67, 63
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-311
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-314
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               10-317
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               177, 171
               

               Conread position:
               10-320
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               10-321
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               292, 0
               

               Conread position:
               10-323
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 160
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               293, 284
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               10-343
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 321
               

               Conread position:
               11-301
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               14-299
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-341
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 282
               

               Conread position:
               15-314
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               16-314
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               16-321
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 0
               

               Conread position:
               16-338
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 57
               

               Conread position:
               17-298
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               18-313
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               19-314
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               19-322
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               21-314
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-342
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               288, 306
               

               Conread position:
               27-302
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               27-314
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               28-314
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               37-314
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               44-314
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-338
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               74-314
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-325
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 75
               
Show alignments to all cow chromosomes.