Cow genome map

Conread name: Ss1.1-Mixn-0027d03.5

Conread position: 1-179
Cow position: chr18:26998530-26998709 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 28

Conread position: 23-182
Cow position: chr18:6309764-6309927 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 141

Conread position: 25-162
Cow position: chr18:238657-238518 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 102

Conread position: 25-172
Cow position: chr18:19123865-19124013 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 127

Conread position: 25-180
Cow position: chr18:3158913-3158761 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 83

Conread position: 25-181
Cow position: chr18:11377054-11377209 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 89

Conread position: 25-181
Cow position: chr18:22065674-22065516 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 25-181
Cow position: chr18:36458621-36458774 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 125

Conread position: 25-182
Cow position: chr18:8967689-8967844 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 36

Conread position: 25-182
Cow position: chr18:11233118-11233275 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 103

Conread position: 25-182
Cow position: chr18:14586789-14586628 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 62

Conread position: 25-182
Cow position: chr18:19640485-19640646 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 25-182
Cow position: chr18:19977291-19977132 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 53

Conread position: 25-182
Cow position: chr18:27388241-27388395 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 8

Conread position: 25-182
Cow position: chr18:33299592-33299745 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 6

Conread position: 25-182
Cow position: chr18:51691777-51691620 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 12

Conread position: 25-182
Cow position: chr18:55782739-55782574 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 25-251
Cow position: chr18:51756785-51757023 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 99

Conread position: 26-180
Cow position: chr18:14815644-14815496 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 120

Conread position: 26-180
Cow position: chr18:34621673-34621521 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 26-182
Cow position: chr18:4625589-4625743 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 43

Conread position: 33-182
Cow position: chr18:7965960-7966103 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 54

Conread position: 33-182
Cow position: chr18:43065205-43065358 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 33-182
Cow position: chr18:56183636-56183785 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 34-128
Cow position: chr18:23658862-23658765 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 34-174
Cow position: chr18:51191056-51190914 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 79

Conread position: 34-182
Cow position: chr18:3180116-3180264 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 114

Conread position: 34-182
Cow position: chr18:4182493-4182344 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 11, 76

Conread position: 34-182
Cow position: chr18:4749184-4749034 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 34-182
Cow position: chr18:9365609-9365760 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 34-182
Cow position: chr18:11671507-11671657 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 34-182
Cow position: chr18:17004947-17005098 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 34-182
Cow position: chr18:19619644-19619796 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 34-182
Cow position: chr18:20864684-20864831 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 12

Conread position: 34-182
Cow position: chr18:22121183-22121037 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 114

Conread position: 34-182
Cow position: chr18:22790376-22790228 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 140

Conread position: 34-182
Cow position: chr18:35076084-35076229 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 97

Conread position: 34-182
Cow position: chr18:49660343-49660198 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 103

Conread position: 34-182
Cow position: chr18:51179048-51178902 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 119

Conread position: 34-182
Cow position: chr18:55001042-55000892 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 41

Conread position: 34-185
Cow position: chr18:46727290-46727447 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 34-185
Cow position: chr18:56361905-56361754 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 104

Conread position: 34-263
Cow position: chr18:19193651-19193426 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 88

Conread position: 35-181
Cow position: chr18:50993570-50993423 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 35-182
Cow position: chr18:4316007-4316154 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 90

Conread position: 35-182
Cow position: chr18:6275516-6275664 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 35-182
Cow position: chr18:32873282-32873437 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 0

Conread position: 36-137
Cow position: chr18:36769226-36769123 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 0

Conread position: 36-146
Cow position: chr18:5076101-5075991 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 36-176
Cow position: chr18:56191503-56191366 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 109

Conread position: 36-177
Cow position: chr18:24834892-24834749 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 36-178
Cow position: chr18:11166680-11166819 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 111

Conread position: 36-178
Cow position: chr18:34052286-34052145 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 36-179
Cow position: chr18:2609028-2608887 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 124

Conread position: 36-179
Cow position: chr18:47314591-47314449 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 11

Conread position: 36-181
Cow position: chr18:7649695-7649840 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 91

Conread position: 36-181
Cow position: chr18:13508028-13507896 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 0

Conread position: 36-181
Cow position: chr18:32860349-32860487 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 36-181
Cow position: chr18:39875557-39875416 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 13

Conread position: 36-181
Cow position: chr18:50700366-50700513 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 36-182
Cow position: chr18:5991199-5991345 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-182
Cow position: chr18:9846733-9846592 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 98

Conread position: 36-182
Cow position: chr18:11322290-11322440 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 36-182
Cow position: chr18:11811680-11811820 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 62

Conread position: 36-182
Cow position: chr18:18958090-18957947 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 107

Conread position: 36-182
Cow position: chr18:27429144-27429291 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 36-182
Cow position: chr18:34527396-34527255 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 10

Conread position: 36-182
Cow position: chr18:35827716-35827565 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 36-182
Cow position: chr18:36265082-36264942 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 36-182
Cow position: chr18:44262324-44262469 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 36-182
Cow position: chr18:45395702-45395848 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 128

Conread position: 36-182
Cow position: chr18:45478628-45478770 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 86

Conread position: 36-182
Cow position: chr18:50637760-50637615 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 10

Conread position: 36-182
Cow position: chr18:51713008-51712861 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 36-185
Cow position: chr18:5742735-5742589 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 99

Conread position: 36-225
Cow position: chr18:15025380-15025571 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 94

Conread position: 36-225
Cow position: chr18:16417995-16417798 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 138, 0

Conread position: 36-227
Cow position: chr18:39279295-39279105 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 12

Conread position: 36-234
Cow position: chr18:52658118-52658319 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 10, 80

Conread position: 36-251
Cow position: chr18:24022085-24022304 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 132, 7

Conread position: 36-251
Cow position: chr18:35012605-35012389 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 183

Conread position: 36-251
Cow position: chr18:40758917-40759134 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 108

Conread position: 36-269
Cow position: chr18:55589772-55589542 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 13

Conread position: 37-148
Cow position: chr18:4556683-4556570 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 37-179
Cow position: chr18:48818547-48818403 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 37-182
Cow position: chr18:5486953-5487094 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 87

Conread position: 37-182
Cow position: chr18:36445136-36445281 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 7

Conread position: 37-182
Cow position: chr18:49161754-49161608 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 37-182
Cow position: chr18:55584372-55584229 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 26

Conread position: 37-234
Cow position: chr18:9007851-9008048 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 63

Conread position: 37-251
Cow position: chr18:13359764-13359992 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 63

Conread position: 37-276
Cow position: chr18:11831838-11832076 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 133

Conread position: 38-165
Cow position: chr18:35058044-35058170 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 38-177
Cow position: chr18:7486955-7487097 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 125

Conread position: 38-180
Cow position: chr18:24977648-24977511 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 108

Conread position: 38-180
Cow position: chr18:29356926-29356785 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 38-180
Cow position: chr18:51211885-51212028 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 38-181
Cow position: chr18:11680423-11680567 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 38-182
Cow position: chr18:3422423-3422564 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 110

Conread position: 38-182
Cow position: chr18:5646953-5647090 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 38-182
Cow position: chr18:7359437-7359583 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 38-182
Cow position: chr18:10656149-10656289 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 38-182
Cow position: chr18:19143813-19143672 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 38-182
Cow position: chr18:24342328-24342464 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 106

Conread position: 38-182
Cow position: chr18:25206489-25206346 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 106

Conread position: 38-182
Cow position: chr18:25647546-25647408 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 38-182
Cow position: chr18:28101327-28101475 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 38-182
Cow position: chr18:31626384-31626529 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 38-182
Cow position: chr18:47868158-47868303 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 38-182
Cow position: chr18:55552666-55552813 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 38-187
Cow position: chr18:20271317-20271171 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 107

Conread position: 38-251
Cow position: chr18:20127399-20127180 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 106

Conread position: 38-269
Cow position: chr18:33157524-33157762 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 38-280
Cow position: chr18:12113664-12113421 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 67

Conread position: 39-182
Cow position: chr18:39115440-39115296 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 39-182
Cow position: chr18:42747300-42747437 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 40-144
Cow position: chr18:21752010-21752113 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 0

Conread position: 40-165
Cow position: chr18:3133037-3132913 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 42

Conread position: 40-169
Cow position: chr18:46135025-46135154 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 74

Conread position: 40-175
Cow position: chr18:9557686-9557819 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 40-175
Cow position: chr18:55699467-55699334 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 36

Conread position: 40-176
Cow position: chr18:43114215-43114078 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 40-178
Cow position: chr18:29648491-29648625 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 40-178
Cow position: chr18:46880978-46880839 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 40-179
Cow position: chr18:10904551-10904690 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 77

Conread position: 40-180
Cow position: chr18:35535580-35535441 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 40-181
Cow position: chr18:7076468-7076612 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 51

Conread position: 40-182
Cow position: chr18:1144488-1144346 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 105, 46

Conread position: 40-182
Cow position: chr18:2270798-2270656 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 40-182
Cow position: chr18:4666506-4666367 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 40-182
Cow position: chr18:4707583-4707440 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 40-182
Cow position: chr18:6290489-6290631 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 65

Conread position: 40-182
Cow position: chr18:9029323-9029466 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 40-182
Cow position: chr18:13172818-13172674 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 40-182
Cow position: chr18:13293215-13293354 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 40-182
Cow position: chr18:15172738-15172876 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 42

Conread position: 40-182
Cow position: chr18:21195634-21195494 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 106

Conread position: 40-182
Cow position: chr18:26938689-26938829 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 40-182
Cow position: chr18:30673935-30673795 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 40-182
Cow position: chr18:39709595-39709735 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 107

Conread position: 40-182
Cow position: chr18:41270792-41270939 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 19

Conread position: 40-182
Cow position: chr18:47183580-47183439 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 127

Conread position: 40-182
Cow position: chr18:48290733-48290593 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 94

Conread position: 40-182
Cow position: chr18:48407494-48407637 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 40-182
Cow position: chr18:52635376-52635241 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 40-182
Cow position: chr18:52637824-52637680 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 40-235
Cow position: chr18:7964936-7965138 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 40-249
Cow position: chr18:29958441-29958234 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 115

Conread position: 40-268
Cow position: chr18:14048418-14048654 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 82

Conread position: 40-268
Cow position: chr18:37703139-37702913 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 185, 59

Conread position: 40-272
Cow position: chr18:26286618-26286858 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 33

Conread position: 40-277
Cow position: chr18:45104741-45104494 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 86, 233

Conread position: 40-280
Cow position: chr18:56172315-56172064 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 116

Conread position: 41-176
Cow position: chr18:52899773-52899909 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 41-179
Cow position: chr18:11694986-11695121 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 41

Conread position: 41-181
Cow position: chr18:35295269-35295408 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 102

Conread position: 41-182
Cow position: chr18:3115166-3115303 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 41-182
Cow position: chr18:9974619-9974480 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 41-182
Cow position: chr18:16227267-16227409 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 41-182
Cow position: chr18:44484052-44483911 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 50

Conread position: 41-182
Cow position: chr18:50082540-50082406 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 107

Conread position: 41-182
Cow position: chr18:52596096-52596234 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 41-182
Cow position: chr18:56150950-56150806 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 41-223
Cow position: chr18:13632245-13632058 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 41-280
Cow position: chr18:56181749-56181511 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 89

Conread position: 42-179
Cow position: chr18:52632698-52632558 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 42-181
Cow position: chr18:33606343-33606471 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 43-182
Cow position: chr18:47517500-47517369 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 44-179
Cow position: chr18:46453170-46453034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 108

Conread position: 44-180
Cow position: chr18:31725175-31725044 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 44-181
Cow position: chr18:55505110-55505249 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 44-182
Cow position: chr18:7322442-7322581 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 44-182
Cow position: chr18:10954183-10954322 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 44-182
Cow position: chr18:26586956-26586816 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 44-236
Cow position: chr18:23447373-23447171 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 101

Conread position: 45-144
Cow position: chr18:29387937-29388035 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 45-180
Cow position: chr18:23630867-23630732 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 69

Conread position: 45-182
Cow position: chr18:11183652-11183789 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 40

Conread position: 45-182
Cow position: chr18:37023846-37023709 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 45-182
Cow position: chr18:38985397-38985535 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 45-182
Cow position: chr18:51595330-51595193 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 45-234
Cow position: chr18:35636640-35636440 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 46-181
Cow position: chr18:33407322-33407458 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 46-181
Cow position: chr18:47779167-47779299 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 36

Conread position: 46-182
Cow position: chr18:29852582-29852720 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 81

Conread position: 46-182
Cow position: chr18:55498777-55498905 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 27, 0

Conread position: 46-182
Cow position: chr18:56163298-56163431 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 101

Conread position: 47-179
Cow position: chr18:25282843-25282712 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 100

Conread position: 47-181
Cow position: chr18:43823241-43823106 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 48-182
Cow position: chr18:18819953-18819811 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 48-182
Cow position: chr18:36097914-36098045 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 97

Conread position: 48-182
Cow position: chr18:49200353-49200488 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 52-182
Cow position: chr18:2592456-2592325 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 53-182
Cow position: chr18:18976802-18976932 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 53-209
Cow position: chr18:2569518-2569678 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 118

Conread position: 56-181
Cow position: chr18:38670392-38670267 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 92

Conread position: 56-182
Cow position: chr18:11691689-11691564 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 0

Conread position: 66-182
Cow position: chr18:21768359-21768474 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 101, 0

Conread position: 67-182
Cow position: chr18:3044165-3044278 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.