Cow genome map

Conread name: Ss1.1-Mixn-0027d03.5

Conread position: 22-182
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 116

Conread position: 22-182
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 40

Conread position: 22-182
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 24-182
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 62

Conread position: 25-157
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 25-163
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 125

Conread position: 25-164
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 25-179
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 11

Conread position: 25-180
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 25-181
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 25-181
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 11

Conread position: 25-182
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 8

Conread position: 25-182
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 53

Conread position: 25-182
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 32-180
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 32-182
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 108

Conread position: 33-176
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 116

Conread position: 33-182
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 18

Conread position: 33-235
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 105

Conread position: 34-164
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 34-178
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 134

Conread position: 34-179
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 34-182
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 118

Conread position: 34-182
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 34-182
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 34-182
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 62

Conread position: 34-182
Cow position:
Alignm length: 151
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 74

Conread position: 34-182
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 34-182
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 113

Conread position: 34-182
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 39

Conread position: 34-249
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 19

Conread position: 34-271
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 41

Conread position: 34-280
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 115

Conread position: 34-280
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 104

Conread position: 36-165
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 36-177
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 113

Conread position: 36-180
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 36-180
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 109

Conread position: 36-180
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 37

Conread position: 36-181
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 36-182
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 36-182
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 36-182
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 79

Conread position: 36-182
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 36-182
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 36-182
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 36-182
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 36-269
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 99

Conread position: 36-283
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 92

Conread position: 37-168
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 37-180
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 111

Conread position: 37-182
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 37-182
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 37-182
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 37-182
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 108

Conread position: 37-182
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 38-176
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 38-180
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 38-180
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 38-180
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 38-180
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 106

Conread position: 38-181
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 87

Conread position: 38-182
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 48

Conread position: 38-182
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 46

Conread position: 38-182
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 83

Conread position: 38-251
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 21

Conread position: 38-269
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 48

Conread position: 38-282
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 148, 0

Conread position: 39-176
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 39-180
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 40-164
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 105

Conread position: 40-179
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 40-180
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 42

Conread position: 40-180
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 40-181
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 40-181
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 40-181
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 0

Conread position: 40-181
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 83

Conread position: 40-182
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 40-182
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 18

Conread position: 40-182
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 47

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 107

Conread position: 40-182
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 75

Conread position: 40-182
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 126

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 96

Conread position: 40-182
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 40-182
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 98

Conread position: 40-184
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 40-185
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 122

Conread position: 40-187
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 122

Conread position: 40-211
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 51

Conread position: 40-211
Cow position:
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 40-221
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 40-247
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 144, 45

Conread position: 40-251
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 19

Conread position: 40-251
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 40-268
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 144

Conread position: 40-269
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 40-272
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 127

Conread position: 40-276
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 104

Conread position: 40-285
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 130

Conread position: 40-337
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 251

Conread position: 41-182
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 68

Conread position: 41-182
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 41-269
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 99

Conread position: 41-269
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 176

Conread position: 42-180
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 42-182
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 43

Conread position: 42-280
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 142, 233

Conread position: 43-181
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 34

Conread position: 44-180
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 44-182
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 44-182
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 9

Conread position: 44-182
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 44-182
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 44-182
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 103

Conread position: 44-182
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 46-181
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 46-182
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 47-182
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 108

Conread position: 47-277
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 225

Conread position: 50-182
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 84

Conread position: 52-249
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 93

Conread position: 52-280
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 101

Conread position: 55-180
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 61-169
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 66-182
Cow position:
Alignm length: 117
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.