Cow genome map
| Conread name: | Ss1.1-Mixn-0027d03.5 |
| Conread position: | 10-180 |
| Cow position: | chr29:11915526-11915693 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 25-177 |
| Cow position: | chr29:18748863-18748713 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 25-179 |
| Cow position: | chr29:20933423-20933581 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 25-179 |
| Cow position: | chr29:35501927-35501779 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 25-182 |
| Cow position: | chr29:28883798-28883958 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 25-182 |
| Cow position: | chr29:30433397-30433558 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 25-269 |
| Cow position: | chr29:23874174-23874436 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 154 |
| Conread position: | 26-179 |
| Cow position: | chr29:17386-17232 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 26-182 |
| Cow position: | chr29:24952408-24952563 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 26-182 |
| Cow position: | chr29:44233227-44233075 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 28-181 |
| Cow position: | chr29:5977394-5977244 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 28-182 |
| Cow position: | chr29:21000366-21000518 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 28-190 |
| Cow position: | chr29:6014827-6014984 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 29-179 |
| Cow position: | chr29:5919598-5919449 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 29-182 |
| Cow position: | chr29:40165968-40166121 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 30-182 |
| Cow position: | chr29:13458788-13458933 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 32-181 |
| Cow position: | chr29:17409063-17409205 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 33-179 |
| Cow position: | chr29:5892574-5892722 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 34-157 |
| Cow position: | chr29:7290624-7290747 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 34-177 |
| Cow position: | chr29:21443616-21443474 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 34-181 |
| Cow position: | chr29:15738616-15738467 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 34-182 |
| Cow position: | chr29:87289-87143 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 34-182 |
| Cow position: | chr29:1582898-1582748 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 34-182 |
| Cow position: | chr29:3395838-3395981 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 34-182 |
| Cow position: | chr29:5062860-5063003 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 110 |
| Conread position: | 34-280 |
| Cow position: | chr29:26778616-26778864 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 35-235 |
| Cow position: | chr29:9638581-9638379 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 36-157 |
| Cow position: | chr29:9332876-9332999 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 36-164 |
| Cow position: | chr29:19756182-19756309 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 36-176 |
| Cow position: | chr29:8164131-8163988 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 36-176 |
| Cow position: | chr29:10296708-10296571 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 36-177 |
| Cow position: | chr29:19338711-19338853 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 36-180 |
| Cow position: | chr29:4480440-4480299 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 36-181 |
| Cow position: | chr29:21265467-21265608 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 36-181 |
| Cow position: | chr29:24604416-24604273 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:254811-254960 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:477839-477981 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:2263296-2263147 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:7041103-7040961 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 36-182 |
| Cow position: | chr29:7408157-7408010 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:11636745-11636598 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 36-182 |
| Cow position: | chr29:12679888-12680033 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:22948931-22948784 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:29066158-29066301 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 36-182 |
| Cow position: | chr29:31926558-31926415 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 36-182 |
| Cow position: | chr29:31928711-31928856 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 36-182 |
| Cow position: | chr29:39567420-39567562 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:41076296-41076148 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 36-182 |
| Cow position: | chr29:45588741-45588598 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 36-269 |
| Cow position: | chr29:94813-94578 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 120, 37 |
| Conread position: | 36-269 |
| Cow position: | chr29:2071836-2071596 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 99 |
| Conread position: | 36-275 |
| Cow position: | chr29:25333721-25333484 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 91, 124 |
| Conread position: | 36-278 |
| Cow position: | chr29:42268423-42268663 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 176 |
| Conread position: | 37-141 |
| Cow position: | chr29:43516948-43516843 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 37-180 |
| Cow position: | chr29:2644574-2644432 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 37-182 |
| Cow position: | chr29:133925-134072 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-182 |
| Cow position: | chr29:18085323-18085468 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 37-182 |
| Cow position: | chr29:35434603-35434749 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 37-272 |
| Cow position: | chr29:15940905-15940653 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 38-142 |
| Cow position: | chr29:12005030-12004926 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-176 |
| Cow position: | chr29:109444-109576 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 38-179 |
| Cow position: | chr29:25088487-25088625 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 38-180 |
| Cow position: | chr29:465668-465524 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 38-180 |
| Cow position: | chr29:1933824-1933684 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 38-181 |
| Cow position: | chr29:9139142-9139283 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 38-182 |
| Cow position: | chr29:12784222-12784082 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 38-182 |
| Cow position: | chr29:30028697-30028552 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 38-182 |
| Cow position: | chr29:36356585-36356723 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 38-228 |
| Cow position: | chr29:21933379-21933181 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 39-157 |
| Cow position: | chr29:5046541-5046420 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 39-181 |
| Cow position: | chr29:7956251-7956110 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 40-144 |
| Cow position: | chr29:4328170-4328274 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 40-144 |
| Cow position: | chr29:28775718-28775614 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-145 |
| Cow position: | chr29:15289476-15289582 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 40-161 |
| Cow position: | chr29:6635840-6635961 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 40-164 |
| Cow position: | chr29:7724916-7725043 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 40-164 |
| Cow position: | chr29:11684748-11684871 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 40-176 |
| Cow position: | chr29:26017775-26017641 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 40-177 |
| Cow position: | chr29:1307128-1306994 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 40-177 |
| Cow position: | chr29:26130519-26130657 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 40-178 |
| Cow position: | chr29:528554-528415 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 40-178 |
| Cow position: | chr29:8935222-8935360 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 40-179 |
| Cow position: | chr29:732358-732493 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 40-179 |
| Cow position: | chr29:13615907-13615772 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 40-179 |
| Cow position: | chr29:32521605-32521744 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-180 |
| Cow position: | chr29:18781602-18781738 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 40-180 |
| Cow position: | chr29:36243075-36243217 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 40-181 |
| Cow position: | chr29:16612218-16612077 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-181 |
| Cow position: | chr29:20178389-20178252 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 40-181 |
| Cow position: | chr29:23119641-23119503 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 40-181 |
| Cow position: | chr29:26771177-26771310 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 40-181 |
| Cow position: | chr29:28197272-28197132 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 40-181 |
| Cow position: | chr29:40096701-40096834 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 40-181 |
| Cow position: | chr29:43252951-43252813 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:479122-479265 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:686455-686317 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:4120582-4120718 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:5550736-5550879 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:6844893-6844756 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:9709435-9709571 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 91 |
| Conread position: | 40-182 |
| Cow position: | chr29:11136152-11136016 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:14501330-14501469 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:15944305-15944445 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 40-182 |
| Cow position: | chr29:18072665-18072808 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:18338810-18338667 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:19762008-19762151 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:20674070-20673927 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 40-182 |
| Cow position: | chr29:22720864-22721005 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:26137522-26137664 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 40-182 |
| Cow position: | chr29:26734769-26734906 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 40-182 |
| Cow position: | chr29:28195783-28195639 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 40-182 |
| Cow position: | chr29:28868367-28868511 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:29632201-29632058 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:30227400-30227542 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 40-182 |
| Cow position: | chr29:32308588-32308448 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 40-182 |
| Cow position: | chr29:36216854-36216992 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:36530599-36530742 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 40-182 |
| Cow position: | chr29:38581705-38581850 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 40-182 |
| Cow position: | chr29:40902983-40902845 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 40-182 |
| Cow position: | chr29:44901966-44901830 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 40-182 |
| Cow position: | chr29:45650606-45650469 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 40-269 |
| Cow position: | chr29:9686265-9686023 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 40-279 |
| Cow position: | chr29:41811841-41811602 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 84 |
| Conread position: | 41-179 |
| Cow position: | chr29:37785442-37785303 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 41-181 |
| Cow position: | chr29:4625256-4625122 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 41-182 |
| Cow position: | chr29:1325178-1325316 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 41-182 |
| Cow position: | chr29:4875166-4875018 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 41-182 |
| Cow position: | chr29:16657428-16657563 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 41-182 |
| Cow position: | chr29:40891965-40891823 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 42-179 |
| Cow position: | chr29:26129237-26129373 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 42-270 |
| Cow position: | chr29:37599466-37599233 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 114, 225 |
| Conread position: | 43-180 |
| Cow position: | chr29:44236207-44236341 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 43-182 |
| Cow position: | chr29:3237620-3237480 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 43-182 |
| Cow position: | chr29:16756794-16756933 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-182 |
| Cow position: | chr29:6813183-6813320 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 44-182 |
| Cow position: | chr29:13372403-13372540 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 44-182 |
| Cow position: | chr29:21236856-21236992 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 44-251 |
| Cow position: | chr29:18212242-18212034 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 45-182 |
| Cow position: | chr29:35738529-35738391 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 46-181 |
| Cow position: | chr29:40117314-40117445 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 47-179 |
| Cow position: | chr29:28674943-28674810 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 47-182 |
| Cow position: | chr29:2984630-2984759 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 48-177 |
| Cow position: | chr29:17222152-17222282 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 48-268 |
| Cow position: | chr29:32963298-32963532 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 48-280 |
| Cow position: | chr29:8926715-8926480 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 174 |
| Conread position: | 50-182 |
| Cow position: | chr29:650020-650153 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 50-182 |
| Cow position: | chr29:13553878-13554009 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 56-182 |
| Cow position: | chr29:23984212-23984084 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 57-178 |
| Cow position: | chr29:36183029-36183146 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 58-278 |
| Cow position: | chr29:20903534-20903306 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 208 |
| Conread position: | 62-182 |
| Cow position: | chr29:25474665-25474786 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 64-182 |
| Cow position: | chr29:19949070-19949188 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-181 |
| Cow position: | chr29:16735242-16735128 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-265 |
| Cow position: | chr29:4520099-4520309 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 77 |
| Conread position: | 67-269 |
| Cow position: | chr29:17668259-17668467 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 166 |
| Conread position: | 67-277 |
| Cow position: | chr29:24578640-24578845 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 88-182 |
| Cow position: | chr29:22778397-22778303 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.