Cow genome map


           Conread name:
           Ss1.1-Mixn-0027p17.5
        

               Conread position:
               1-556
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               26-390
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               64-629
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               390
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 233
               

               Conread position:
               64-629
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               381
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               33, 217
               

               Conread position:
               78-754
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 146
               

               Conread position:
               79-555
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               79-629
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               378
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               110-457
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               112-475
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               112-631
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               114-433
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 100
               

               Conread position:
               114-433
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               114-433
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               114-433
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               114-547
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               118-547
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               118-547
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               118-547
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               118-547
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               118-672
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               365
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               118-791
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               437
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               120-433
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               120-468
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               120-514
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               120-547
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               120-798
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               121-479
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 265
               

               Conread position:
               122-624
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               323
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 412
               

               Conread position:
               131-547
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               282
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               25, 119
               

               Conread position:
               131-629
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 119
               

               Conread position:
               134-569
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               139-547
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               177, 87
               

               Conread position:
               144-631
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               336
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               144-635
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               323
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               144-672
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               359
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               160-433
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               162-672
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               344
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               177-557
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               193-668
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 202
               

               Conread position:
               204-749
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               364
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               93, 103
               

               Conread position:
               204-749
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               366
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               163, 86
               

               Conread position:
               204-761
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               361
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               163, 86
               

               Conread position:
               204-782
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               369
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               162, 86
               

               Conread position:
               208-528
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               234-658
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               242-629
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 171
               

               Conread position:
               278-749
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 208
               

               Conread position:
               281-528
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               319-672
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               319-749
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               308
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               319-761
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               299
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               319-774
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               319-782
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               319-782
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               304
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               320-668
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               321-749
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               325-774
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               288
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 204
               

               Conread position:
               328-678
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 97
               

               Conread position:
               337-668
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 121
               

               Conread position:
               373-754
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               171, 83
               

               Conread position:
               379-678
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               382-749
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 151
               

               Conread position:
               424-769
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 34
               

               Conread position:
               425-749
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               436-766
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               436-798
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 86
               

               Conread position:
               549-769
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 121
               
Show alignments to all cow chromosomes.