Cow genome map


           Conread name:
           Ss1.1-Mixn-0028b08.5
        

               Conread position:
               1-126
               

               Cow position:
               chr18:41689315-41689437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               125-263
               

               Cow position:
               chr18:41689882-41690020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               127
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               256-332
               

               Cow position:
               chr18:41690388-41690464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               77
               

               Alignm identity:
               72
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               328-491
               

               Cow position:
               chr18:41691333-41691496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               486-624
               

               Cow position:
               chr18:41691574-41691712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               129
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               618-720
               

               Cow position:
               chr18:41693196-41693298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               721-828
               

               Cow position:
               chr18:41694217-41694324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               983-1132
               

               Cow position:
               chr18:41695290-41695439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               138
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1126-1515
               

               Cow position:
               chr18:41695534-41695935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 184
               
Show alignments to all cow chromosomes.