Cow genome map
| Conread name: | Ss1.1-Mixn-0030k23.5 |
| Conread position: | 10-277 |
| Cow position: | chr25:25652912-25653179 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 161, 170 |
| Conread position: | 11-276 |
| Cow position: | chr25:25652241-25652506 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 149, 165 |
| Conread position: | 12-246 |
| Cow position: | chr25:24385194-24384960 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-296 |
| Cow position: | chr25:34473813-34474094 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 20-287 |
| Cow position: | chr25:25652418-25652685 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 145, 156 |
| Conread position: | 21-239 |
| Cow position: | chr25:33530544-33530762 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 139, 160 |
| Conread position: | 21-246 |
| Cow position: | chr25:3676139-3676364 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 159, 151 |
| Conread position: | 21-246 |
| Cow position: | chr25:33127865-33128089 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 144, 158 |
| Conread position: | 21-251 |
| Cow position: | chr25:24385017-24384787 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 135, 155 |
| Conread position: | 21-251 |
| Cow position: | chr25:33506895-33507125 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-251 |
| Cow position: | chr25:33529161-33529391 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 159, 151 |
| Conread position: | 21-251 |
| Cow position: | chr25:33529245-33529475 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 145, 179 |
| Conread position: | 21-251 |
| Cow position: | chr25:33530124-33530354 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-265 |
| Cow position: | chr25:3636247-3636003 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 135, 159 |
| Conread position: | 21-265 |
| Cow position: | chr25:25653007-25653251 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 139, 155 |
| Conread position: | 21-274 |
| Cow position: | chr25:24385101-24384848 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 148, 161 |
| Conread position: | 21-276 |
| Cow position: | chr25:4657318-4657063 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-287 |
| Cow position: | chr25:4657402-4657136 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 21-287 |
| Cow position: | chr25:33506811-33507077 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 145, 172 |
| Conread position: | 21-287 |
| Cow position: | chr25:34733946-34733680 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 246, 251 |
| Conread position: | 21-291 |
| Cow position: | chr25:25652587-25652857 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 146, 161 |
| Conread position: | 21-347 |
| Cow position: | chr25:3664330-3664655 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 145, 156 |
| Conread position: | 41-276 |
| Cow position: | chr25:25652187-25652422 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 136 |
| Conread position: | 47-287 |
| Cow position: | chr25:4657460-4657220 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 143, 125 |
Show alignments to all cow chromosomes.