Cow genome map


           Conread name:
           Ss1.1-Mixn-0031a13.5
        

               Conread position:
               16-126
               

               Cow position:
               chr8:47600692-47600802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-217
               

               Cow position:
               chr8:47602306-47602400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               213-306
               

               Cow position:
               chr8:47603681-47603774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               305-667
               

               Cow position:
               chr8:47604380-47604742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               665-786
               

               Cow position:
               chr8:47606492-47606613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               116
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               785-905
               

               Cow position:
               chr8:47607041-47607161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               905-1084
               

               Cow position:
               chr8:47608976-47609155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1149-1319
               

               Cow position:
               chr8:47610212-47610381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1317-1630
               

               Cow position:
               chr8:47614674-47614987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 302
               

               Conread position:
               1594-1690
               

               Cow position:
               chr8:47617413-47617509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.