Cow genome map

Conread name: Ss1.1-Mixn-0032m21.5

Conread position: 22-330
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 60

Conread position: 22-434
Cow position:
Alignm length: 424
Alignm identity: 263
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 118

Conread position: 26-523
Cow position:
Alignm length: 510
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 121

Conread position: 30-492
Cow position:
Alignm length: 467
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 43

Conread position: 37-415
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 43-438
Cow position:
Alignm length: 398
Alignm identity: 246
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 84, 93

Conread position: 52-298
Cow position:
Alignm length: 248
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 242, 11

Conread position: 52-414
Cow position:
Alignm length: 364
Alignm identity: 219
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 254, 27

Conread position: 57-344
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 48

Conread position: 58-460
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 58-509
Cow position:
Alignm length: 457
Alignm identity: 279
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 441

Conread position: 59-515
Cow position:
Alignm length: 466
Alignm identity: 285
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 97, 338

Conread position: 60-460
Cow position:
Alignm length: 406
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 61-465
Cow position:
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 81

Conread position: 61-526
Cow position:
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 342

Conread position: 69-434
Cow position:
Alignm length: 368
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 71

Conread position: 70-492
Cow position:
Alignm length: 424
Alignm identity: 267
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 326, 332

Conread position: 81-359
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 129, 143

Conread position: 81-460
Cow position:
Alignm length: 381
Alignm identity: 225
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 319, 314

Conread position: 81-465
Cow position:
Alignm length: 386
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 21

Conread position: 84-419
Cow position:
Alignm length: 339
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 234, 212

Conread position: 84-439
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 52

Conread position: 85-465
Cow position:
Alignm length: 387
Alignm identity: 246
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 188

Conread position: 86-358
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 42

Conread position: 86-460
Cow position:
Alignm length: 376
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 308, 314

Conread position: 90-300
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 90-378
Cow position:
Alignm length: 290
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 128, 9

Conread position: 97-465
Cow position:
Alignm length: 369
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 98-433
Cow position:
Alignm length: 337
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 190, 196

Conread position: 100-430
Cow position:
Alignm length: 332
Alignm identity: 204
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 256, 261

Conread position: 100-430
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 111

Conread position: 100-460
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 289

Conread position: 100-465
Cow position:
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 100-466
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 65

Conread position: 100-467
Cow position:
Alignm length: 368
Alignm identity: 223
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 100-490
Cow position:
Alignm length: 392
Alignm identity: 236
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 118, 111

Conread position: 100-518
Cow position:
Alignm length: 422
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 101-358
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 194, 199

Conread position: 101-378
Cow position:
Alignm length: 279
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 109

Conread position: 101-415
Cow position:
Alignm length: 319
Alignm identity: 205
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 101-459
Cow position:
Alignm length: 360
Alignm identity: 222
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 276, 271

Conread position: 101-460
Cow position:
Alignm length: 360
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 101-463
Cow position:
Alignm length: 364
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 109

Conread position: 101-463
Cow position:
Alignm length: 366
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 124

Conread position: 101-463
Cow position:
Alignm length: 363
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 101-463
Cow position:
Alignm length: 363
Alignm identity: 214
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 101-464
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 101-465
Cow position:
Alignm length: 367
Alignm identity: 219
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 110

Conread position: 101-465
Cow position:
Alignm length: 368
Alignm identity: 242
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 279, 292

Conread position: 101-465
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 124

Conread position: 101-465
Cow position:
Alignm length: 367
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 283, 293

Conread position: 101-467
Cow position:
Alignm length: 368
Alignm identity: 228
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 290, 279

Conread position: 101-467
Cow position:
Alignm length: 368
Alignm identity: 226
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 290, 280

Conread position: 101-467
Cow position:
Alignm length: 368
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 283, 287

Conread position: 101-467
Cow position:
Alignm length: 368
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 269, 273

Conread position: 101-468
Cow position:
Alignm length: 371
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 44

Conread position: 101-469
Cow position:
Alignm length: 369
Alignm identity: 216
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 101-492
Cow position:
Alignm length: 393
Alignm identity: 247
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 280, 284

Conread position: 106-455
Cow position:
Alignm length: 350
Alignm identity: 217
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 106-467
Cow position:
Alignm length: 362
Alignm identity: 215
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 106-468
Cow position:
Alignm length: 365
Alignm identity: 218
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 109

Conread position: 107-405
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 111, 103

Conread position: 107-415
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 272, 280

Conread position: 107-450
Cow position:
Alignm length: 345
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 112, 103

Conread position: 107-450
Cow position:
Alignm length: 344
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 107-459
Cow position:
Alignm length: 355
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 35

Conread position: 107-460
Cow position:
Alignm length: 356
Alignm identity: 218
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 102

Conread position: 107-460
Cow position:
Alignm length: 354
Alignm identity: 219
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 107-462
Cow position:
Alignm length: 359
Alignm identity: 231
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 297, 274

Conread position: 107-464
Cow position:
Alignm length: 360
Alignm identity: 226
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 49

Conread position: 107-465
Cow position:
Alignm length: 360
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 179, 183

Conread position: 107-466
Cow position:
Alignm length: 360
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 107-466
Cow position:
Alignm length: 361
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 35

Conread position: 107-467
Cow position:
Alignm length: 363
Alignm identity: 219
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 273, 304

Conread position: 107-467
Cow position:
Alignm length: 362
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 280, 274

Conread position: 107-468
Cow position:
Alignm length: 362
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 107-468
Cow position:
Alignm length: 363
Alignm identity: 232
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 103, 107

Conread position: 107-469
Cow position:
Alignm length: 363
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 107-490
Cow position:
Alignm length: 384
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 107-492
Cow position:
Alignm length: 390
Alignm identity: 247
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 47

Conread position: 107-492
Cow position:
Alignm length: 388
Alignm identity: 239
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 111, 102

Conread position: 108-377
Cow position:
Alignm length: 270
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 108-507
Cow position:
Alignm length: 401
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 187, 192

Conread position: 109-493
Cow position:
Alignm length: 386
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 110, 105

Conread position: 110-450
Cow position:
Alignm length: 344
Alignm identity: 213
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 93

Conread position: 110-467
Cow position:
Alignm length: 360
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 119, 123

Conread position: 110-474
Cow position:
Alignm length: 367
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 23

Conread position: 116-459
Cow position:
Alignm length: 349
Alignm identity: 228
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 97, 104

Conread position: 128-465
Cow position:
Alignm length: 340
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 23

Conread position: 135-497
Cow position:
Alignm length: 364
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 243, 256

Conread position: 146-464
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 91

Conread position: 147-460
Cow position:
Alignm length: 315
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 172, 165

Conread position: 148-460
Cow position:
Alignm length: 315
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 150, 156

Conread position: 148-460
Cow position:
Alignm length: 314
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 148, 153

Conread position: 148-487
Cow position:
Alignm length: 342
Alignm identity: 208
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 163, 169

Conread position: 165-425
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 213, 222

Conread position: 167-422
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 6

Conread position: 170-428
Cow position:
Alignm length: 262
Alignm identity: 168
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 139, 124

Conread position: 171-466
Cow position:
Alignm length: 297
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 224, 230

Conread position: 175-414
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 35

Conread position: 177-465
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 44

Conread position: 183-377
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 41

Conread position: 183-461
Cow position:
Alignm length: 282
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 87

Conread position: 185-463
Cow position:
Alignm length: 280
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 30, 26

Conread position: 185-465
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 217, 199

Conread position: 232-467
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 146

Conread position: 249-522
Cow position:
Alignm length: 276
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 152, 146

Conread position: 251-460
Cow position:
Alignm length: 211
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 58

Conread position: 278-467
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.