Cow genome map
Conread name: | Ss1.1-Mixn-0032m21.5 |
Conread position: | 1-497 |
Cow position: | chr25:3675913-3676403 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 8 |
Conread position: | 1-540 |
Cow position: | chr25:33506660-33507202 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 18-460 |
Cow position: | chr25:33530236-33530687 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 369 |
Conread position: | 25-460 |
Cow position: | chr25:3663873-3664305 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 25-464 |
Cow position: | chr25:4657529-4657087 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 31-465 |
Cow position: | chr25:33530005-33530440 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 51 |
Conread position: | 37-352 |
Cow position: | chr25:3636272-3635960 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 204 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 181, 34 |
Conread position: | 44-518 |
Cow position: | chr25:33528974-33529443 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 8 |
Conread position: | 50-377 |
Cow position: | chr25:24385030-24384705 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 220 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 6, 19 |
Conread position: | 52-331 |
Cow position: | chr25:3637045-3636761 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 189 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 19, 43 |
Conread position: | 56-370 |
Cow position: | chr25:22941321-22941009 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 216 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 71, 34 |
Conread position: | 57-538 |
Cow position: | chr25:33530366-33530850 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 15 |
Conread position: | 59-509 |
Cow position: | chr25:24385191-24384740 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 141 |
Conread position: | 60-463 |
Cow position: | chr25:24385441-24385039 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 267 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 42, 30 |
Conread position: | 61-460 |
Cow position: | chr25:25652916-25653318 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 69-504 |
Cow position: | chr25:3636495-3636061 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 399 |
Conread position: | 70-490 |
Cow position: | chr25:34473575-34473992 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 63 |
Conread position: | 73-521 |
Cow position: | chr25:34473659-34474105 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 296 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 5, 69 |
Conread position: | 76-376 |
Cow position: | chr25:326485-326787 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 193 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 76-422 |
Cow position: | chr25:33530471-33530817 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 311 |
Conread position: | 76-460 |
Cow position: | chr25:33530219-33530603 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 79-504 |
Cow position: | chr25:25652685-25653109 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 397, 382 |
Conread position: | 79-504 |
Cow position: | chr25:33530138-33530562 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 309 |
Conread position: | 80-415 |
Cow position: | chr25:24398744-24398409 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 224 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 82-454 |
Cow position: | chr25:22940521-22940148 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 232 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 5, 139 |
Conread position: | 85-460 |
Cow position: | chr25:34763161-34763533 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 238 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 293, 0 |
Conread position: | 86-295 |
Cow position: | chr25:33529266-33529475 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 142 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 86-429 |
Cow position: | chr25:4657381-4657038 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 232 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 10, 16 |
Conread position: | 86-450 |
Cow position: | chr25:24398987-24398626 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 229 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 143, 123 |
Conread position: | 86-466 |
Cow position: | chr25:24385248-24384868 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 41 |
Conread position: | 86-468 |
Cow position: | chr25:25652272-25652654 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 124 |
Conread position: | 88-493 |
Cow position: | chr25:3636560-3636155 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 211 |
Conread position: | 90-450 |
Cow position: | chr25:33127723-33128082 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 220 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 305, 8 |
Conread position: | 91-403 |
Cow position: | chr25:3664272-3664584 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 92-427 |
Cow position: | chr25:3636303-3635969 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 8 |
Conread position: | 92-459 |
Cow position: | chr25:23267406-23267046 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 240 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 269, 107 |
Conread position: | 97-504 |
Cow position: | chr25:25652199-25652605 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 361 |
Conread position: | 100-331 |
Cow position: | chr25:3676174-3676405 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 100-335 |
Cow position: | chr25:24398640-24398405 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 156 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 100-464 |
Cow position: | chr25:33529112-33529476 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 306, 311 |
Conread position: | 100-465 |
Cow position: | chr25:3664029-3664394 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 287 |
Conread position: | 101-318 |
Cow position: | chr25:25653127-25653344 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 204, 199 |
Conread position: | 101-340 |
Cow position: | chr25:23267236-23266997 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 92, 20 |
Conread position: | 101-352 |
Cow position: | chr25:3664366-3664614 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 169 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 234, 0 |
Conread position: | 101-379 |
Cow position: | chr25:22236012-22236290 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 186 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 117, 111 |
Conread position: | 101-450 |
Cow position: | chr25:33157290-33156941 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 226 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 117, 109 |
Conread position: | 101-459 |
Cow position: | chr25:24385317-24384959 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 35 |
Conread position: | 101-460 |
Cow position: | chr25:25652539-25652898 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 101-464 |
Cow position: | chr25:3664198-3664561 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 300 |
Conread position: | 101-467 |
Cow position: | chr25:25652455-25652821 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 110 |
Conread position: | 101-468 |
Cow position: | chr25:33298998-33299365 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 220 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 101-504 |
Cow position: | chr25:25652371-25652773 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 189 |
Conread position: | 101-512 |
Cow position: | chr25:25652623-25653035 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 37 |
Conread position: | 105-465 |
Cow position: | chr25:33157370-33157010 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 234 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 113, 106 |
Conread position: | 106-453 |
Cow position: | chr25:34732588-34732241 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 220 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 285, 271 |
Conread position: | 106-463 |
Cow position: | chr25:22235933-22236290 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 226 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 37, 44 |
Conread position: | 107-303 |
Cow position: | chr25:427350-427546 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 131 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 107-394 |
Cow position: | chr25:34733988-34733701 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 196 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 271, 280 |
Conread position: | 107-408 |
Cow position: | chr25:33529203-33529504 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 277 |
Conread position: | 107-460 |
Cow position: | chr25:25652797-25653150 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 107-463 |
Cow position: | chr25:34473528-34473881 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 0 |
Conread position: | 107-493 |
Cow position: | chr25:24385059-24384673 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 309, 318 |
Conread position: | 109-454 |
Cow position: | chr25:22941354-22941009 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 230 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 29, 21 |
Conread position: | 109-465 |
Cow position: | chr25:25652883-25653239 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 101 |
Conread position: | 110-468 |
Cow position: | chr25:3636370-3636012 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 110-512 |
Cow position: | chr25:3664123-3664526 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 292 |
Conread position: | 116-460 |
Cow position: | chr25:34762859-34763200 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 215 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 250, 258 |
Conread position: | 149-378 |
Cow position: | chr25:34763474-34763703 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 156 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 70, 65 |
Conread position: | 149-393 |
Cow position: | chr25:427308-427552 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 154 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 149-463 |
Cow position: | chr25:34763141-34763455 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 204 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 149-469 |
Cow position: | chr25:33298626-33298946 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 195 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 85 |
Conread position: | 149-469 |
Cow position: | chr25:33298710-33299030 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 193 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 155-495 |
Cow position: | chr25:34734025-34733681 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 229 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 159-423 |
Cow position: | chr25:36844463-36844206 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 173 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 253, 108 |
Conread position: | 159-424 |
Cow position: | chr25:23267262-23266997 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 175 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 118, 46 |
Conread position: | 161-450 |
Cow position: | chr25:326488-326777 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 177 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 161-465 |
Cow position: | chr25:22940525-22940221 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 206 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 64, 53 |
Conread position: | 161-487 |
Cow position: | chr25:36844545-36844228 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 203 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 201, 0 |
Conread position: | 166-463 |
Cow position: | chr25:33157477-33157180 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 192 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 57, 48 |
Conread position: | 167-346 |
Cow position: | chr25:24398990-24398811 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 18, 9 |
Conread position: | 169-465 |
Cow position: | chr25:25652187-25652483 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 175-467 |
Cow position: | chr25:4657460-4657168 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 35 |
Conread position: | 175-487 |
Cow position: | chr25:24398733-24398421 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 192 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 301, 293 |
Conread position: | 184-461 |
Cow position: | chr25:3637079-3636799 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 188 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 185-349 |
Cow position: | chr25:24399212-24399048 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 117 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 194-487 |
Cow position: | chr25:22235853-22236146 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 184 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 24, 17 |
Conread position: | 243-465 |
Cow position: | chr25:4657476-4657254 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 159, 149 |
Conread position: | 244-472 |
Cow position: | chr25:5034965-5034739 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 153 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 140, 14 |
Conread position: | 249-504 |
Cow position: | chr25:3663926-3664180 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 176 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 245, 0 |
Conread position: | 256-506 |
Cow position: | chr25:34473509-34473759 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 168 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 131, 121 |
Show alignments to all cow chromosomes.