Cow genome map


           Conread name:
           Ss1.1-Mixn-0032m21.5
        

               Conread position:
               22-430
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               22-469
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               291
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               23-469
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 120
               

               Conread position:
               26-295
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               36-359
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               38-530
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               56-469
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               57-427
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 215
               

               Conread position:
               69-342
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               69-469
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               249, 121
               

               Conread position:
               69-504
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               70-340
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               70-465
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               159, 163
               

               Conread position:
               70-469
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 239
               

               Conread position:
               70-518
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 63
               

               Conread position:
               71-490
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               275
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               85, 91
               

               Conread position:
               73-504
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               79-504
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               79-516
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               85-421
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               86-424
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 136
               

               Conread position:
               86-529
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               129, 124
               

               Conread position:
               97-469
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 212
               

               Conread position:
               99-247
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-469
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               101-380
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 35
               

               Conread position:
               107-426
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               226, 242
               

               Conread position:
               148-517
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               258, 263
               

               Conread position:
               160-426
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 260
               

               Conread position:
               162-406
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               137, 147
               

               Conread position:
               165-463
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               75, 153
               

               Conread position:
               167-518
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               133, 142
               

               Conread position:
               172-490
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               177-343
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-377
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               184-336
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 125
               

               Conread position:
               235-474
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               171, 14
               

               Conread position:
               247-533
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               257-492
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               126, 132
               

               Conread position:
               268-469
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 41
               
Show alignments to all cow chromosomes.