Cow genome map
| Conread name: | Ss1.1-Mixn-0037h03.5 |
| Conread position: | 1-424 |
| Cow position: | chr18:53591816-53591404 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 411-543 |
| Cow position: | chr18:56332268-56332136 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:40070898-40071029 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:40249139-40249270 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:53496849-53496980 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:53523915-53524046 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:53569628-53569759 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:53589591-53589460 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:53601239-53601108 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 121 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:55026311-55026442 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 122, 126 |
| Conread position: | 412-543 |
| Cow position: | chr18:55077000-55076870 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:55521511-55521642 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr18:56492609-56492740 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 413-543 |
| Cow position: | chr18:53507416-53507546 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 524-920 |
| Cow position: | chr18:55007821-55008214 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 316, 19 |
| Conread position: | 541-738 |
| Cow position: | chr18:53571379-53571573 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 45 |
| Conread position: | 541-739 |
| Cow position: | chr18:53559242-53559437 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 541-799 |
| Cow position: | chr18:55067581-55067326 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 172, 63 |
| Conread position: | 541-920 |
| Cow position: | chr18:54966326-54966700 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 240, 59 |
| Conread position: | 541-924 |
| Cow position: | chr18:54992109-54992489 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 541-994 |
| Cow position: | chr18:40250567-40251007 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 163, 189 |
| Conread position: | 541-1328 |
| Cow position: | chr18:53587755-53586965 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 622 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 584, 0 |
| Conread position: | 1059-1328 |
| Cow position: | chr18:42791233-42791502 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 136, 144 |
| Conread position: | 1062-1332 |
| Cow position: | chr18:42791152-42791422 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 133, 137 |
| Conread position: | 1072-1332 |
| Cow position: | chr18:42792002-42792262 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 1112-1328 |
| Cow position: | chr18:41197561-41197777 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.