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Cow genome map

           
Conread name:
           
Ss1.1-Mixn-0038g14.5
        

               
Conread position:
               
1-111
               

               
Cow position:
               
chr18:12585457-12585347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr18:23658876-23658758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr18:21751986-21752125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:51191070-51190914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:51679190-51679038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr18:52899750-52899909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr18:56191521-56191366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr18:19640481-19640652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr18:13212934-13213099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr18:24293542-24293703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr18:49660357-49660189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 144
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr18:51239920-51240091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr18:49156320-49156148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr18:4535301-4535127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr18:46135003-46135178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr18:48818566-48818383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 159
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:7076446-7076633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:26391370-26391550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 124
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:26843963-26843786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr18:29264768-29264586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr18:48241625-48241802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr18:8967685-8967868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr18:16378654-16378856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:11671493-11671699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:46881000-46880789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:10574736-10574940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:26822626-26822834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:11811660-11811865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr18:35818317-35818109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:9712738-9712945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr18:7050632-7050854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr18:33852538-33852753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:81439-81656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 211
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:21721597-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:27078531-27078755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:28539703-28539481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr18:19320661-19320891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr18:9846750-9846528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:238661-238430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
49, 105
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:43431028-43431263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:49665474-49665246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:30385974-30385734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:10040271-10040034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:14480162-14480387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:40196141-40196382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr18:7930460-7930219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr18:39709573-39709810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 202
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:6290467-6290712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:47314615-47314363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:3098629-3098386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:35076070-35076317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr18:37334796-37335037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
185, 139
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr18:56168234-56167985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:18627644-18627384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:20998931-20998682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr18:40472023-40472284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 255
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr18:41270770-41271029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 216
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr18:19159281-19159031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr18:21939038-21939302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:43563911-43564170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr18:51713026-51712754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 198
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:24342308-24342565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr18:13977357-13977618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr18:22065678-22065408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:11309099-11309368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
126, 259
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:16172588-16172316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 242
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:19356553-19356822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:27103004-27103272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:35612539-35612810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 260
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:4323234-4323501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 242
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:19362603-19362331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:41853241-41852972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 216
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:52382380-52382650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:11233114-11233385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr18:25924406-25924687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 190
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr18:5570837-5571110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:26306299-26306579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 256
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:35637843-35638118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 124
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:45979387-45979657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:49543165-49543433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr18:2270820-2270541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 190
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:29387910-29388196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 98
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:1859539-1859239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:18562855-18562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:49161773-49161456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 281
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:4371449-4371750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:13632268-13631970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:22874556-22874855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:55397000-55397296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
167, 18
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:601487-601199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42966521-42966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 325
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:56150973-56150652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:34755241-34754932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 232
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:55046257-55046572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 259
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:27554871-27554551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 259
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:7486935-7487254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 218
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:28968259-28967933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 261
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:2774904-2774593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 54
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:22092464-22092779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:56361919-56361593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:20864670-20864998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr18:23062520-23062176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr18:25003194-25002862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr18:11831821-11832148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr18:21810598-21810247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:23803041-23803393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:45168516-45168868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 259
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:4725798-4725457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 191
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:7947058-7947423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 273
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:12604326-12604672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:13172842-13172499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 228
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:17002344-17002700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 202
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:20329126-20328776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 236
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:22237272-22236918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:25355545-25355899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 286
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:29862579-29862230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:36512658-36513014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 258
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:38157522-38157166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 267
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:41837086-41836734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 254
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:44235881-44236238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
42, 245
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:46108695-46108355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:51485618-51485971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
55, 255
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:51826974-51827314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:3027682-3027326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr18:55462026-55461671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr18:7955831-7956184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr18:45961576-45961235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 74
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr18:30248445-30248102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr18:14815652-14815309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 131
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr18:6665673-6665313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 122
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:4926757-4927111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:7965950-7966284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:28794383-28794030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:39002112-39001765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:52637851-52637487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 268
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:55552648-55553009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 257
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:6046801-6046434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:23949727-23949367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
55, 199
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:24956979-24957345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 255
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:33488527-33488162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:40758899-40759253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:54033725-54034089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr18:16134625-16134266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr18:51298163-51298527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr18:55697332-55696977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:4078491-4078842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
242, 56
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:20174447-20174081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:55589792-55589444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr18:4749198-4748831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr18:21682285-21681922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr18:10575795-10576175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 56
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:28101309-28101698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 308
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:47183602-47183227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 150
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:56165666-56166047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 181
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr18:4380978-4381360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr18:6275499-6275876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 195
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr18:12776090-12775718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:18340270-18339873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:31672820-31672438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:38606919-38607297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:44802200-44801813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr18:26938668-26939060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:35012623-35012239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:47511677-47512086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 238
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:11322272-11322676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 219
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:20641802-20641416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:38686778-38687160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:45904209-45903817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:51691785-51691382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 202
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:4540189-4539798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:14586793-14586385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr18:55119557-55119966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 193
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr18:11790615-11791010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:4884832-4884430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 191
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:16227242-16227652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 204
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:22121197-22120790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:55782743-55782338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 236
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:11779348-11779745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:56181772-56181363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr18:3133059-3132676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr18:30360437-30360054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr18:3416856-3417253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:5189996-5189599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:29958463-29958076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr18:9365595-9366018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr18:21195656-21195238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 185
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr18:6881655-6881257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr18:19536342-19536756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
55, 256
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr18:45104763-45104338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 174
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:4796652-4797069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:9007832-9008226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:52635398-52634964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr18:9089388-9089804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 57
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr18:9010415-9010815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr18:9974642-9974211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 255
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr18:19273416-19272982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr18:28768050-28768485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 89
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr18:54031393-54031849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
125, 55
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr18:3158917-3158432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 18
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr18:36458617-36459103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:29371550-29372038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:32285075-32285560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:32301220-32301705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:18091738-18091218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 340
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:38075469-38074949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:55757785-55757251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:51179062-51178530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 275
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:10656129-10656640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 206
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:12270175-12270701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 208
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr18:32017385-32017518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr18:51595357-51595182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr18:35535601-35535407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr18:35295246-35295447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr18:56163270-56163474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr18:32280974-32281176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr18:1733507-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr18:24834911-24834680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr18:32860332-32860565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
189, 122
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr18:4432755-4433025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 259
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr18:29768598-29768866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
96, 103
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr18:7056505-7056776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:24590814-24591119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr18:21528089-21528398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 243
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr18:39279314-39278996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
30, 192
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr18:37021610-37021966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr18:34052303-34051958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr18:9029302-9029643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 194
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr18:55701962-55701631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr18:56431144-56430805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr18:26535832-26535472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
117, 97
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr18:55015082-55015410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr18:19850060-19849681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 27
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr18:12118161-12117772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 179
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr18:23766738-23766320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:44262303-44262720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr18:55692506-55692916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 80
               

               
Conread position:
               
3-139
               

               
Cow position:
               
chr18:23429467-23429604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:15324086-15323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr18:23619314-23619492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr18:31003089-31002910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr18:27530049-27530273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr18:27194528-27194751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr18:27388239-27388474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr18:48290753-48290510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr18:7322418-7322683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 215
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr18:19977293-19977036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr18:35472252-35471984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:32876372-32876648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 265
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr18:26937412-26937692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:1584524-1584241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
248, 53
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr18:35636666-35636335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr18:14048397-14048727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 173
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr18:8105258-8104914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr18:16842381-16842026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 244
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr18:7950798-7951148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr18:37509972-37510327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 257
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr18:5486936-5487285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr18:7964916-7965278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 179
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr18:51443743-51443391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 10
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:11377052-11377442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr18:51756783-51757173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 101
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr18:54974305-54973928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 148
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr18:17004935-17005342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 371
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr18:2849576-2849166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 174
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr18:52632237-52632413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr18:12113682-12113285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr18:21095265-21095096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr18:11231771-11231587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr18:27798119-27797912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr18:27995712-27995941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr18:32019833-32019604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr18:27540455-27540687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr18:52629225-52628993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr18:11515131-11514893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr18:15911324-15911086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr18:23466485-23466721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 212
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr18:47745738-47745976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr18:28086848-28087090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr18:55022131-55021877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr18:31054428-31054172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 230
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr18:34050931-34050668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr18:43226264-43226002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr18:43539150-43539412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr18:55436101-55435836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr18:32755243-32755509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:3190777-3191043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:3805615-3805876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:22591439-22591172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:31309808-31310075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 186
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:37733724-37733991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:43075948-43076215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 257
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:47709526-47709797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 260
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:51458812-51458546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:52575136-52575403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:55418015-55418280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 240
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:56045859-56046126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:56292281-56292544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 252
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr18:13270935-13271201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 240
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr18:16857818-16858088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:8624298-8624022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:23660996-23661272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:26485428-26485704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:40252968-40252692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 257
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:40329543-40329819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:55555283-55555555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 253
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr18:30673952-30673674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr18:34056311-34056027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 212
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr18:55768487-55768189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 276
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:1611448-1611749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:5186455-5186154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 186
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:19531389-19531690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:20980506-20980205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:26343759-26344060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:30677347-30677648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:31202062-31202363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:33616389-33616088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:37314693-37314392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:40059709-40060010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:40328872-40328571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:42421719-42421418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:54071798-54071497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:8316119-8316425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:18214989-18214684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 186
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:31213778-31213473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 261
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:41854428-41854122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:46145488-46145794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:46581494-46581187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:51579752-51579446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr18:54365503-54365197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr18:51601634-51601322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 261
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr18:11251349-11251035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr18:31139782-31140096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:17349687-17350002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:24036818-24036501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:26883755-26884071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:33856003-33855687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:33907525-33907208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:34814475-34814792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 186
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr18:51346321-51346638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr18:22396394-22396070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 186
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr18:23765317-23765001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr18:40203113-40202804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr18:55547390-55547069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr18:602433-602113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 240
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr18:29072449-29072770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 263
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr18:42608642-42608321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 240
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr18:29079770-29080091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 261
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr18:27429130-27429483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 207
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr18:26998551-26998921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
52, 275
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr18:215349-214982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 233
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr18:11618169-11618519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr18:37002317-37002712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
6-156
               

               
Cow position:
               
chr18:4556697-4556550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr18:3150672-3150508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr18:32406072-32405897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr18:5991184-5991387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr18:48407477-48407701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 208
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr18:26572950-26572714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr18:2099665-2099428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr18:4624741-4624509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
162, 108
               

               
Conread position:
               
6-248
               

               
Cow position:
               
chr18:32218568-32218323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr18:35827726-35827478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr18:36445120-36445386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr18:34621676-34621376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr18:33793392-33793720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr18:51500395-51500039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
6-354
               

               
Cow position:
               
chr18:50993582-50993238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr18:15025365-15025720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr18:44484070-44483711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:56172332-56171925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
46, 133
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr18:7649680-7650082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr18:10904533-10904943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr18:11183630-11184035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr18:11691722-11691310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
6-480
               

               
Cow position:
               
chr18:37023868-37023396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 400
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr18:20195814-20195603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 166
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr18:16045311-16045076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 135
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr18:26286602-26286842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr18:24620428-24620702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 255
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr18:1216961-1216625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
7-406
               

               
Cow position:
               
chr18:3180108-3180499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 226
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr18:13293200-13293444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 139
               

               
Conread position:
               
8-334
               

               
Cow position:
               
chr18:26355332-26355012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr18:3166797-3166441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
8-385
               

               
Cow position:
               
chr18:43823263-43822890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 188
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr18:55505091-55505486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 98
               

               
Conread position:
               
9-170
               

               
Cow position:
               
chr18:31997172-31997329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 104
               

               
Conread position:
               
9-184
               

               
Cow position:
               
chr18:22569339-22569163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr18:1023478-1023653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr18:32908590-32908783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr18:54646179-54646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr18:32244326-32244110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
9-248
               

               
Cow position:
               
chr18:48036471-48036707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr18:24022075-24022308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
159, 17
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr18:29224370-29224623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr18:26447701-26447963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 251
               

               
Conread position:
               
9-281
               

               
Cow position:
               
chr18:26586974-26586694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 259
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr18:25626712-25626990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 207
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr18:33756574-33756848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr18:44549216-44548908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr18:16418005-16417689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 148
               

               
Conread position:
               
9-344
               

               
Cow position:
               
chr18:43065200-43065556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 238
               

               
Conread position:
               
9-351
               

               
Cow position:
               
chr18:48513645-48513308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
9-351
               

               
Cow position:
               
chr18:51996392-51996725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
9-351
               

               
Cow position:
               
chr18:54656978-54657318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 196
               

               
Conread position:
               
9-364
               

               
Cow position:
               
chr18:21251677-21252035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
9-369
               

               
Cow position:
               
chr18:20125994-20126356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr18:13508038-13507674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 41
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr18:21103068-21102706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr18:49100681-49100294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr18:50637772-50637399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 208
               

               
Conread position:
               
9-394
               

               
Cow position:
               
chr18:45570712-45571088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
9-397
               

               
Cow position:
               
chr18:3209409-3209801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
9-397
               

               
Cow position:
               
chr18:11867042-11867419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 50
               

               
Conread position:
               
9-398
               

               
Cow position:
               
chr18:4182499-4182111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 81
               

               
Conread position:
               
9-398
               

               
Cow position:
               
chr18:7359425-7359825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 234
               

               
Conread position:
               
9-398
               

               
Cow position:
               
chr18:29648477-29648863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
9-399
               

               
Cow position:
               
chr18:19619638-19620022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 204
               

               
Conread position:
               
9-404
               

               
Cow position:
               
chr18:19193657-19193281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 23
               

               
Conread position:
               
9-406
               

               
Cow position:
               
chr18:15172724-15173100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr18:19645866-19646269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr18:29058804-29058406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 117
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr18:55001048-55000639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
9-425
               

               
Cow position:
               
chr18:22790382-22789980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
9-427
               

               
Cow position:
               
chr18:28658223-28657804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 256
               

               
Conread position:
               
9-515
               

               
Cow position:
               
chr18:15881166-15880649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr18:36207765-36207604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 15
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr18:5742744-5742523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 178
               

               
Conread position:
               
11-165
               

               
Cow position:
               
chr18:45478620-45478774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr18:16148165-16147919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr18:23652920-23652675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr18:32873278-32873639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
11-406
               

               
Cow position:
               
chr18:6309774-6310167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
12-155
               

               
Cow position:
               
chr18:19433661-19433521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr18:33272639-33272868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr18:47872803-47873025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
153, 5
               

               
Conread position:
               
12-255
               

               
Cow position:
               
chr18:17324404-17324653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 238
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr18:18958097-18957850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 172
               

               
Conread position:
               
12-351
               

               
Cow position:
               
chr18:14127274-14126934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 242
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr18:45395695-45395896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 137
               

               
Conread position:
               
13-225
               

               
Cow position:
               
chr18:52644276-52644056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr18:9818532-9818764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
13-266
               

               
Cow position:
               
chr18:5761603-5761344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
13-271
               

               
Cow position:
               
chr18:27990796-27991061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 231
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr18:35364078-35363779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 252
               

               
Conread position:
               
13-321
               

               
Cow position:
               
chr18:32436426-32436112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 248
               

               
Conread position:
               
13-330
               

               
Cow position:
               
chr18:33606330-33606640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
13-364
               

               
Cow position:
               
chr18:39662479-39662826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
13-385
               

               
Cow position:
               
chr18:29356935-29356557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
13-476
               

               
Cow position:
               
chr18:25932338-25931868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 53
               

               
Conread position:
               
14-351
               

               
Cow position:
               
chr18:4625596-4625921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
14-397
               

               
Cow position:
               
chr18:21768325-21768693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
14-403
               

               
Cow position:
               
chr18:46727289-46727673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 189
               

               
Conread position:
               
14-514
               

               
Cow position:
               
chr18:7951898-7952387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr18:51412072-51412309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
15-347
               

               
Cow position:
               
chr18:4858212-4857858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
15-421
               

               
Cow position:
               
chr18:28924135-28923744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
16-414
               

               
Cow position:
               
chr18:10954172-10954561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 241
               

               
Conread position:
               
17-155
               

               
Cow position:
               
chr18:43114221-43114078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
17-166
               

               
Cow position:
               
chr18:29640656-29640803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
17-170
               

               
Cow position:
               
chr18:36769226-36769083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
17-251
               

               
Cow position:
               
chr18:48549690-48549937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 161
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr18:11368064-11367825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr18:39503986-39503721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr18:11166676-11166961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr18:52658118-52658392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
17-312
               

               
Cow position:
               
chr18:10101191-10101487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
92, 199
               

               
Conread position:
               
17-317
               

               
Cow position:
               
chr18:16516901-16516596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 243
               

               
Conread position:
               
17-351
               

               
Cow position:
               
chr18:19143817-19143477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
17-364
               

               
Cow position:
               
chr18:17944565-17944909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
17-365
               

               
Cow position:
               
chr18:50700364-50700734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
17-366
               

               
Cow position:
               
chr18:21175879-21176235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 242
               

               
Conread position:
               
17-366
               

               
Cow position:
               
chr18:23424627-23424966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
17-367
               

               
Cow position:
               
chr18:25206493-25206139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 269
               

               
Conread position:
               
17-398
               

               
Cow position:
               
chr18:33158653-33159022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
17-408
               

               
Cow position:
               
chr18:36265084-36264681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr18:46048458-46048856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
18-170
               

               
Cow position:
               
chr18:29043645-29043492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
18-170
               

               
Cow position:
               
chr18:47779156-47779309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr18:8989046-8989225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
18-227
               

               
Cow position:
               
chr18:19123875-19124089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:4421426-4421644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
18-266
               

               
Cow position:
               
chr18:33410972-33410718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 243
               

               
Conread position:
               
18-311
               

               
Cow position:
               
chr18:10861718-10861436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:33851954-33852288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 219
               

               
Conread position:
               
18-351
               

               
Cow position:
               
chr18:35552061-35551720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 240
               

               
Conread position:
               
18-354
               

               
Cow position:
               
chr18:16044454-16044115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
18-519
               

               
Cow position:
               
chr18:39875560-39875060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
19-129
               

               
Cow position:
               
chr18:11262660-11262771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr18:36346358-36346192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
19-210
               

               
Cow position:
               
chr18:3422421-3422614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr18:5646951-5647169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr18:24977650-24977429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
19-243
               

               
Cow position:
               
chr18:1594228-1594014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
19-246
               

               
Cow position:
               
chr18:4578768-4578539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
19-247
               

               
Cow position:
               
chr18:47868156-47868393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
19-249
               

               
Cow position:
               
chr18:11191136-11191361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
19-249
               

               
Cow position:
               
chr18:35058042-35058271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
19-252
               

               
Cow position:
               
chr18:31626382-31626618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
32, 182
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr18:8169875-8170126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chr18:54029568-54029820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr18:16258569-16258809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
19-276
               

               
Cow position:
               
chr18:43463706-43463451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr18:4316008-4316278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr18:22275334-22275066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 136
               

               
Conread position:
               
19-305
               

               
Cow position:
               
chr18:52632706-52632420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
19-320
               

               
Cow position:
               
chr18:36477901-36478205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
19-322
               

               
Cow position:
               
chr18:4649034-4648743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
19-325
               

               
Cow position:
               
chr18:11680421-11680732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 248
               

               
Conread position:
               
19-354
               

               
Cow position:
               
chr18:25970931-25970599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
19-358
               

               
Cow position:
               
chr18:35797325-35797659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 177
               

               
Conread position:
               
19-358
               

               
Cow position:
               
chr18:42060777-42061116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 172
               

               
Conread position:
               
19-364
               

               
Cow position:
               
chr18:20127401-20127059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
19-384
               

               
Cow position:
               
chr18:51211883-51212249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
19-398
               

               
Cow position:
               
chr18:30341462-30341104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
19-398
               

               
Cow position:
               
chr18:33157522-33157895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
19-415
               

               
Cow position:
               
chr18:20271319-20270915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 253
               

               
Conread position:
               
19-415
               

               
Cow position:
               
chr18:29065671-29065288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
19-525
               

               
Cow position:
               
chr18:25647548-25647028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 110
               

               
Conread position:
               
21-252
               

               
Cow position:
               
chr18:9806113-9806352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr18:268108-267800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
21-342
               

               
Cow position:
               
chr18:6103411-6103073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 168
               

               
Conread position:
               
21-358
               

               
Cow position:
               
chr18:35537527-35537196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
22-259
               

               
Cow position:
               
chr18:17334711-17334472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
22-311
               

               
Cow position:
               
chr18:45880305-45880043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
23-204
               

               
Cow position:
               
chr18:33843357-33843166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
23-229
               

               
Cow position:
               
chr18:50927444-50927649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
23-249
               

               
Cow position:
               
chr18:5457555-5457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
197, 144
               

               
Conread position:
               
23-252
               

               
Cow position:
               
chr18:37703139-37702922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
23-257
               

               
Cow position:
               
chr18:10516853-10517073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
23-262
               

               
Cow position:
               
chr18:45572814-45573054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
23-264
               

               
Cow position:
               
chr18:23317398-23317161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
23-275
               

               
Cow position:
               
chr18:4707583-4707324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
23-335
               

               
Cow position:
               
chr18:32121355-32121051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
23-351
               

               
Cow position:
               
chr18:9557686-9558011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
23-351
               

               
Cow position:
               
chr18:43950550-43950859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
23-358
               

               
Cow position:
               
chr18:4515732-4516069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
23-366
               

               
Cow position:
               
chr18:13359767-13360102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
23-384
               

               
Cow position:
               
chr18:33299603-33299970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
23-390
               

               
Cow position:
               
chr18:23476965-23476614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
365, 25
               

               
Conread position:
               
23-395
               

               
Cow position:
               
chr18:4666506-4666140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
23-396
               

               
Cow position:
               
chr18:11684695-11685060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 44
               

               
Conread position:
               
23-397
               

               
Cow position:
               
chr18:6610153-6609772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
23-400
               

               
Cow position:
               
chr18:55789287-55788914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
23-405
               

               
Cow position:
               
chr18:12241995-12242360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
23-412
               

               
Cow position:
               
chr18:1144488-1144090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
23-420
               

               
Cow position:
               
chr18:39115439-39115018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 364
               

               
Conread position:
               
23-420
               

               
Cow position:
               
chr18:42455315-42454922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
23-427
               

               
Cow position:
               
chr18:18919248-18918853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
23-437
               

               
Cow position:
               
chr18:22214191-22214606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
24-170
               

               
Cow position:
               
chr18:21067646-21067792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
24-192
               

               
Cow position:
               
chr18:11694986-11695153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
24-203
               

               
Cow position:
               
chr18:39739986-39740162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr18:55584372-55584159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr18:4152810-4152591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr18:26006511-26006741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr18:17380281-17380541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
24-398
               

               
Cow position:
               
chr18:50082540-50082177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
24-414
               

               
Cow position:
               
chr18:43284046-43283663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
24-425
               

               
Cow position:
               
chr18:49655421-49655791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
24-437
               

               
Cow position:
               
chr18:21266214-21266630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
24-497
               

               
Cow position:
               
chr18:3115166-3115636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 222
               

               
Conread position:
               
25-164
               

               
Cow position:
               
chr18:6425616-6425760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
25-230
               

               
Cow position:
               
chr18:4529227-4529423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr18:51537955-51537732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
25-249
               

               
Cow position:
               
chr18:47931153-47930933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr18:23808166-23807916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
25-390
               

               
Cow position:
               
chr18:56145383-56145741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
25-392
               

               
Cow position:
               
chr18:29759759-29760101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
25-486
               

               
Cow position:
               
chr18:42747303-42747747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
25-513
               

               
Cow position:
               
chr18:50381964-50382427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr18:34681494-34681279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
26-263
               

               
Cow position:
               
chr18:26335108-26334867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
26-398
               

               
Cow position:
               
chr18:5995180-5995548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
26-415
               

               
Cow position:
               
chr18:47517500-47517106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 100
               

               
Conread position:
               
27-168
               

               
Cow position:
               
chr18:727375-727520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
27-170
               

               
Cow position:
               
chr18:37690897-37690758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
27-216
               

               
Cow position:
               
chr18:21203550-21203362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 169
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr18:16642695-16642997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 233
               

               
Conread position:
               
27-351
               

               
Cow position:
               
chr18:23447373-23447028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
27-351
               

               
Cow position:
               
chr18:51406194-51405873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
27-365
               

               
Cow position:
               
chr18:19387289-19387619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
27-366
               

               
Cow position:
               
chr18:249094-248767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
27-412
               

               
Cow position:
               
chr18:46453170-46452784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 193
               

               
Conread position:
               
28-170
               

               
Cow position:
               
chr18:23630867-23630721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
28-174
               

               
Cow position:
               
chr18:18445399-18445259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
28-200
               

               
Cow position:
               
chr18:24047958-24048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
28-255
               

               
Cow position:
               
chr18:31562680-31562458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
28-292
               

               
Cow position:
               
chr18:16847408-16847669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
28-310
               

               
Cow position:
               
chr18:54658011-54658304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
28-396
               

               
Cow position:
               
chr18:38985397-38985777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 241
               

               
Conread position:
               
28-399
               

               
Cow position:
               
chr18:31586654-31586294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
28-519
               

               
Cow position:
               
chr18:12122959-12122461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
28-519
               

               
Cow position:
               
chr18:42479870-42479398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
28-521
               

               
Cow position:
               
chr18:28291313-28290811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 228
               

               
Conread position:
               
29-249
               

               
Cow position:
               
chr18:56476122-56476335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr18:5783394-5783114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 10
               

               
Conread position:
               
29-341
               

               
Cow position:
               
chr18:33407322-33407640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
29-351
               

               
Cow position:
               
chr18:29852582-29852909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
29-366
               

               
Cow position:
               
chr18:38344515-38344854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
29-399
               

               
Cow position:
               
chr18:10891238-10891595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
29-404
               

               
Cow position:
               
chr18:5766140-5766499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
29-414
               

               
Cow position:
               
chr18:55498777-55499167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
29-421
               

               
Cow position:
               
chr18:31082609-31082246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr18:43806163-43806514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 225
               

               
Conread position:
               
31-137
               

               
Cow position:
               
chr18:50974864-50974757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
31-326
               

               
Cow position:
               
chr18:48453407-48453696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
32-365
               

               
Cow position:
               
chr18:16726360-16726695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
32-398
               

               
Cow position:
               
chr18:12058731-12059077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
33-155
               

               
Cow position:
               
chr18:18819951-18819829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
33-191
               

               
Cow position:
               
chr18:2439006-2438848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
33-251
               

               
Cow position:
               
chr18:19486828-19487047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
33-252
               

               
Cow position:
               
chr18:28085290-28085508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
33-258
               

               
Cow position:
               
chr18:50566587-50566813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
33-266
               

               
Cow position:
               
chr18:52569157-52569389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
33-351
               

               
Cow position:
               
chr18:49200355-49200666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
33-366
               

               
Cow position:
               
chr18:36097916-36098261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 311
               

               
Conread position:
               
33-398
               

               
Cow position:
               
chr18:56159180-56159541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr18:55787642-55788006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
33-412
               

               
Cow position:
               
chr18:5578019-5578392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
33-511
               

               
Cow position:
               
chr18:36230996-36230529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr18:19831013-19831290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
34-398
               

               
Cow position:
               
chr18:47525122-47525488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
34-399
               

               
Cow position:
               
chr18:25282839-25282473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 236
               

               
Conread position:
               
35-399
               

               
Cow position:
               
chr18:1495022-1495384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 174
               

               
Conread position:
               
36-230
               

               
Cow position:
               
chr18:21773207-21773410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
38-164
               

               
Cow position:
               
chr18:38670393-38670263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
38-216
               

               
Cow position:
               
chr18:18976804-18976988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 173
               

               
Conread position:
               
38-246
               

               
Cow position:
               
chr18:39185330-39185538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
157, 61
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr18:34325238-34324957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
38-500
               

               
Cow position:
               
chr18:56183658-56184110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 178
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr18:1587069-1586889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
39-249
               

               
Cow position:
               
chr18:2569521-2569723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
39-264
               

               
Cow position:
               
chr18:5539281-5539511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 205
               

               
Conread position:
               
39-266
               

               
Cow position:
               
chr18:52676177-52675951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
39-284
               

               
Cow position:
               
chr18:5247798-5247545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 233
               

               
Conread position:
               
39-332
               

               
Cow position:
               
chr18:29649972-29649672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 178
               

               
Conread position:
               
39-349
               

               
Cow position:
               
chr18:46437032-46436734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
39-398
               

               
Cow position:
               
chr18:51656332-51655962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 232
               

               
Conread position:
               
39-410
               

               
Cow position:
               
chr18:4668773-4668407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
39-423
               

               
Cow position:
               
chr18:21192689-21192310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
39-508
               

               
Cow position:
               
chr18:33523952-33524423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
40-177
               

               
Cow position:
               
chr18:7958001-7958129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
40-252
               

               
Cow position:
               
chr18:52868917-52869138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
40-288
               

               
Cow position:
               
chr18:52864594-52864337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
40-353
               

               
Cow position:
               
chr18:4369058-4368745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
40-423
               

               
Cow position:
               
chr18:55759759-55759362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 226
               

               
Conread position:
               
41-354
               

               
Cow position:
               
chr18:32773602-32773915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
41-398
               

               
Cow position:
               
chr18:30794157-30794506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 178
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr18:329549-329357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
42-254
               

               
Cow position:
               
chr18:13497884-13497659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
42-398
               

               
Cow position:
               
chr18:2592449-2592088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 270
               

               
Conread position:
               
43-229
               

               
Cow position:
               
chr18:5711943-5711755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
43-253
               

               
Cow position:
               
chr18:35098726-35098511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 159
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr18:53539084-53538878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
44-351
               

               
Cow position:
               
chr18:17228241-17227932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
44-360
               

               
Cow position:
               
chr18:54574587-54574277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 132
               

               
Conread position:
               
44-398
               

               
Cow position:
               
chr18:15614122-15613780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
44-412
               

               
Cow position:
               
chr18:34527376-34527000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 191
               

               
Conread position:
               
44-498
               

               
Cow position:
               
chr18:41238597-41239058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
45-222
               

               
Cow position:
               
chr18:16184698-16184527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
47-398
               

               
Cow position:
               
chr18:4490145-4489828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
48-203
               

               
Cow position:
               
chr18:20797831-20797985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
48-312
               

               
Cow position:
               
chr18:21205092-21205358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chr18:1582543-1582328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
49-354
               

               
Cow position:
               
chr18:37382366-37382057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 218
               

               
Conread position:
               
50-193
               

               
Cow position:
               
chr18:52402785-52402640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
50-249
               

               
Cow position:
               
chr18:19761431-19761627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr18:36187799-36187602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr18:4765540-4765315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
50-347
               

               
Cow position:
               
chr18:9883403-9883702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr18:8964273-8964555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
50-398
               

               
Cow position:
               
chr18:4758292-4757954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
50-399
               

               
Cow position:
               
chr18:29796692-29796347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
50-503
               

               
Cow position:
               
chr18:3044165-3044624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
51-326
               

               
Cow position:
               
chr18:2480376-2480664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 195
               

               
Conread position:
               
52-351
               

               
Cow position:
               
chr18:35452677-35452959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
52-365
               

               
Cow position:
               
chr18:32411256-32410967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
52-398
               

               
Cow position:
               
chr18:7952381-7952718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
53-409
               

               
Cow position:
               
chr18:10322536-10322896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 188
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr18:48713292-48713641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 13
               

               
Conread position:
               
55-284
               

               
Cow position:
               
chr18:7058967-7059188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
55-298
               

               
Cow position:
               
chr18:35582364-35582117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
56-257
               

               
Cow position:
               
chr18:23360368-23360574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
57-198
               

               
Cow position:
               
chr18:13507588-13507453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
57-281
               

               
Cow position:
               
chr18:17670062-17669837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
57-400
               

               
Cow position:
               
chr18:12023893-12023556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 74
               

               
Conread position:
               
58-195
               

               
Cow position:
               
chr18:24734858-24735000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
58-254
               

               
Cow position:
               
chr18:8164299-8164099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
58-272
               

               
Cow position:
               
chr18:56192849-56192640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
58-371
               

               
Cow position:
               
chr18:22411876-22411558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr18:22056112-22055828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
66-257
               

               
Cow position:
               
chr18:1588854-1588671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
66-297
               

               
Cow position:
               
chr18:31512-31742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
66-351
               

               
Cow position:
               
chr18:17649987-17649705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
66-398
               

               
Cow position:
               
chr18:4496139-4495806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 191
               

               
Conread position:
               
66-406
               

               
Cow position:
               
chr18:42431859-42431522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
67-179
               

               
Cow position:
               
chr18:24508455-24508342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
68-322
               

               
Cow position:
               
chr18:20482123-20481878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
69-392
               

               
Cow position:
               
chr18:18592224-18592547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
70-218
               

               
Cow position:
               
chr18:2354647-2354801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chr18:30380392-30380186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
70-269
               

               
Cow position:
               
chr18:34818072-34818274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 170
               

               
Conread position:
               
70-434
               

               
Cow position:
               
chr18:32883054-32883415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 257
               

               
Conread position:
               
71-250
               

               
Cow position:
               
chr18:54275288-54275465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
71-252
               

               
Cow position:
               
chr18:34021144-34021321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
173, 111
               

               
Conread position:
               
72-365
               

               
Cow position:
               
chr18:19363687-19363983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
72-425
               

               
Cow position:
               
chr18:42432333-42431982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 44
               

               
Conread position:
               
73-228
               

               
Cow position:
               
chr18:35908379-35908535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
73-342
               

               
Cow position:
               
chr18:12809615-12809879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
73-406
               

               
Cow position:
               
chr18:47828585-47828904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
74-248
               

               
Cow position:
               
chr18:24636271-24636431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
74-360
               

               
Cow position:
               
chr18:3018322-3018044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
74-488
               

               
Cow position:
               
chr18:33007813-33008235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 357
               

               
Conread position:
               
75-307
               

               
Cow position:
               
chr18:24946055-24945816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
75-506
               

               
Cow position:
               
chr18:17391216-17390821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 43
               

               
Conread position:
               
76-244
               

               
Cow position:
               
chr18:16053231-16053059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
77-403
               

               
Cow position:
               
chr18:3193467-3193792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
78-259
               

               
Cow position:
               
chr18:28823208-28823026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
90, 178
               

               
Conread position:
               
78-410
               

               
Cow position:
               
chr18:247923-247604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
26, 184
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr18:24856083-24855763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
194, 133
               

               
Conread position:
               
80-351
               

               
Cow position:
               
chr18:4628795-4629075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
91, 143
               

               
Conread position:
               
81-203
               

               
Cow position:
               
chr18:33882894-33882770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
82-298
               

               
Cow position:
               
chr18:14872101-14871890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
82-358
               

               
Cow position:
               
chr18:25984808-25984531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
82-364
               

               
Cow position:
               
chr18:41005299-41005031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr18:5010112-5010299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 176
               

               
Conread position:
               
83-299
               

               
Cow position:
               
chr18:15340674-15340463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr18:18962074-18961809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
83-351
               

               
Cow position:
               
chr18:28295945-28295672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 174
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr18:895793-896066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
83-398
               

               
Cow position:
               
chr18:43020624-43020324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
83-421
               

               
Cow position:
               
chr18:48829021-48828672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
83-491
               

               
Cow position:
               
chr18:16709451-16709048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
208, 44
               

               
Conread position:
               
83-513
               

               
Cow position:
               
chr18:27556007-27556446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
84-275
               

               
Cow position:
               
chr18:21904671-21904467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
84-406
               

               
Cow position:
               
chr18:10977444-10977125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
84-421
               

               
Cow position:
               
chr18:33896656-33896315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
85-328
               

               
Cow position:
               
chr18:35777726-35777967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
85-334
               

               
Cow position:
               
chr18:219100-219354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
89, 236
               

               
Conread position:
               
85-397
               

               
Cow position:
               
chr18:21574760-21575067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
87-275
               

               
Cow position:
               
chr18:55716078-55715885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
87-351
               

               
Cow position:
               
chr18:36659409-36659135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 205
               

               
Conread position:
               
88-410
               

               
Cow position:
               
chr18:48451823-48452164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 214
               

               
Conread position:
               
89-243
               

               
Cow position:
               
chr18:13876719-13876568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
89-471
               

               
Cow position:
               
chr18:51392874-51392492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
91-415
               

               
Cow position:
               
chr18:1399577-1399256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr18:19623150-19623426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr18:47006877-47007109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
94-243
               

               
Cow position:
               
chr18:14085238-14085384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
94-412
               

               
Cow position:
               
chr18:2864222-2863898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 309
               

               
Conread position:
               
95-284
               

               
Cow position:
               
chr18:53962461-53962658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
95-366
               

               
Cow position:
               
chr18:52583773-52584037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 163
               

               
Conread position:
               
95-399
               

               
Cow position:
               
chr18:1585338-1585034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
96-201
               

               
Cow position:
               
chr18:4832869-4832765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
96-398
               

               
Cow position:
               
chr18:16545689-16545385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
96-408
               

               
Cow position:
               
chr18:39434602-39434914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
97-427
               

               
Cow position:
               
chr18:12273434-12273765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
100-397
               

               
Cow position:
               
chr18:27109513-27109213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
102-263
               

               
Cow position:
               
chr18:29188794-29188960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
102-354
               

               
Cow position:
               
chr18:3387336-3387079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
103-297
               

               
Cow position:
               
chr18:23757699-23757893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
103-359
               

               
Cow position:
               
chr18:15677421-15677690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
103-510
               

               
Cow position:
               
chr18:1954808-1954407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
104-253
               

               
Cow position:
               
chr18:15810124-15809974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
104-284
               

               
Cow position:
               
chr18:18868530-18868721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
104-406
               

               
Cow position:
               
chr18:52877170-52877445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
105-344
               

               
Cow position:
               
chr18:47812257-47812496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
105-399
               

               
Cow position:
               
chr18:7415242-7414947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
105-421
               

               
Cow position:
               
chr18:45637608-45637313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr18:20870410-20870221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr18:23616092-23615795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
107-263
               

               
Cow position:
               
chr18:6127287-6127135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 88
               

               
Conread position:
               
107-420
               

               
Cow position:
               
chr18:39623588-39623901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
108-344
               

               
Cow position:
               
chr18:32430789-32430562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
109-318
               

               
Cow position:
               
chr18:19887780-19887580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 18
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr18:54056355-54056563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
109-354
               

               
Cow position:
               
chr18:3211660-3211914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
109-364
               

               
Cow position:
               
chr18:36184113-36183859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
112-385
               

               
Cow position:
               
chr18:179236-178974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
112-420
               

               
Cow position:
               
chr18:7076753-7077054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
112-420
               

               
Cow position:
               
chr18:7108920-7109230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 255
               

               
Conread position:
               
114-238
               

               
Cow position:
               
chr18:35237128-35237002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
114-243
               

               
Cow position:
               
chr18:18815881-18815747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
114-312
               

               
Cow position:
               
chr18:36123334-36123533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
114-352
               

               
Cow position:
               
chr18:306263-306033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
114-366
               

               
Cow position:
               
chr18:23715088-23714835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
116-437
               

               
Cow position:
               
chr18:19896659-19896331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
117-351
               

               
Cow position:
               
chr18:858609-858857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
121-231
               

               
Cow position:
               
chr18:16313189-16313300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
121-360
               

               
Cow position:
               
chr18:52704049-52703804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
122-351
               

               
Cow position:
               
chr18:30430573-30430795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
122-358
               

               
Cow position:
               
chr18:45453511-45453750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 186
               

               
Conread position:
               
122-358
               

               
Cow position:
               
chr18:55806827-55806593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
123-250
               

               
Cow position:
               
chr18:35419616-35419743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-319
               

               
Cow position:
               
chr18:27637016-27637213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
123-394
               

               
Cow position:
               
chr18:18369557-18369286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 186
               

               
Conread position:
               
124-267
               

               
Cow position:
               
chr18:55403735-55403876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
125-223
               

               
Cow position:
               
chr18:47963483-47963582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
125-349
               

               
Cow position:
               
chr18:36746447-36746228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
126-400
               

               
Cow position:
               
chr18:8299822-8300099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 226
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr18:23429746-23429993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
127-410
               

               
Cow position:
               
chr18:5072601-5072318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
128-370
               

               
Cow position:
               
chr18:46276498-46276248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
129-358
               

               
Cow position:
               
chr18:4602198-4601978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
129-363
               

               
Cow position:
               
chr18:16686525-16686290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
129-365
               

               
Cow position:
               
chr18:22143724-22143474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
130-351
               

               
Cow position:
               
chr18:346689-346465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
130-414
               

               
Cow position:
               
chr18:47835639-47835918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
131-318
               

               
Cow position:
               
chr18:21401805-21401614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
131-403
               

               
Cow position:
               
chr18:51190777-51190514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr18:15517349-15517093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
135-420
               

               
Cow position:
               
chr18:36201808-36201528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
137-397
               

               
Cow position:
               
chr18:28930810-28930557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
137-403
               

               
Cow position:
               
chr18:21740990-21740730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
138-308
               

               
Cow position:
               
chr18:7970188-7970362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
138-515
               

               
Cow position:
               
chr18:43555704-43555335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 278
               

               
Conread position:
               
141-354
               

               
Cow position:
               
chr18:40268869-40268664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
142-301
               

               
Cow position:
               
chr18:200566-200408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
142-351
               

               
Cow position:
               
chr18:4330779-4330994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr18:56191147-56190882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr18:22275008-22274794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
147-397
               

               
Cow position:
               
chr18:8171255-8171006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
147-398
               

               
Cow position:
               
chr18:30586390-30586145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
148-399
               

               
Cow position:
               
chr18:51850729-51850483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
148-410
               

               
Cow position:
               
chr18:48633623-48633863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
150-379
               

               
Cow position:
               
chr18:31125388-31125169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr18:39022095-39022303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
153-344
               

               
Cow position:
               
chr18:4952373-4952184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
154-354
               

               
Cow position:
               
chr18:3370735-3370936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 172
               

               
Conread position:
               
155-351
               

               
Cow position:
               
chr18:24266575-24266374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
155-360
               

               
Cow position:
               
chr18:19640817-19641014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
155-397
               

               
Cow position:
               
chr18:4556331-4556090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr18:29991680-29991495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
156-392
               

               
Cow position:
               
chr18:11577927-11578148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
156-414
               

               
Cow position:
               
chr18:35873913-35874172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
160-384
               

               
Cow position:
               
chr18:20462851-20462628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
192, 30
               

               
Conread position:
               
161-351
               

               
Cow position:
               
chr18:30225701-30225497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr18:52854893-52855136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
16, 207
               

               
Conread position:
               
162-351
               

               
Cow position:
               
chr18:51644177-51643985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
162-385
               

               
Cow position:
               
chr18:19687864-19688090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
164-354
               

               
Cow position:
               
chr18:50095547-50095364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
165-395
               

               
Cow position:
               
chr18:29474588-29474820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 191
               

               
Conread position:
               
166-412
               

               
Cow position:
               
chr18:1571388-1571145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
90, 138
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr18:46135591-46135846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
167-322
               

               
Cow position:
               
chr18:46047717-46047875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
167-398
               

               
Cow position:
               
chr18:5632115-5632348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
167-399
               

               
Cow position:
               
chr18:7963294-7963509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
167-399
               

               
Cow position:
               
chr18:51594952-51594723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
168-347
               

               
Cow position:
               
chr18:51148231-51148047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
169-351
               

               
Cow position:
               
chr18:30405811-30405627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
171-398
               

               
Cow position:
               
chr18:54130480-54130250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
177-351
               

               
Cow position:
               
chr18:11907055-11907229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 159
               

               
Conread position:
               
177-398
               

               
Cow position:
               
chr18:48242049-48242272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
177-415
               

               
Cow position:
               
chr18:4264531-4264296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
177-487
               

               
Cow position:
               
chr18:49841138-49841433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 146
               

               
Conread position:
               
177-514
               

               
Cow position:
               
chr18:42751752-42751410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 183
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr18:25006628-25006419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr18:36768944-36768731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
168, 67
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr18:3085654-3085340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
179-360
               

               
Cow position:
               
chr18:23623771-23623591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
179-410
               

               
Cow position:
               
chr18:4204059-4203840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
183-364
               

               
Cow position:
               
chr18:37303010-37303199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
188-392
               

               
Cow position:
               
chr18:2146716-2146505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
188-405
               

               
Cow position:
               
chr18:23630730-23630521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
189-401
               

               
Cow position:
               
chr18:20798190-20798409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 206
               

               
Conread position:
               
189-405
               

               
Cow position:
               
chr18:34834362-34834582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
194-545
               

               
Cow position:
               
chr18:23162769-23163107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
286, 105
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr18:45079595-45079449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
197-398
               

               
Cow position:
               
chr18:49017382-49017573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr18:31711686-31711473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
197-500
               

               
Cow position:
               
chr18:52403092-52402801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 142
               

               
Conread position:
               
199-388
               

               
Cow position:
               
chr18:52406583-52406762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
200-421
               

               
Cow position:
               
chr18:19883412-19883636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
201-415
               

               
Cow position:
               
chr18:35535267-35535051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 203
               

               
Conread position:
               
202-425
               

               
Cow position:
               
chr18:49038344-49038569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
204-503
               

               
Cow position:
               
chr18:41950103-41950380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
276, 34
               

               
Conread position:
               
204-541
               

               
Cow position:
               
chr18:4535129-4534802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
205-393
               

               
Cow position:
               
chr18:23169463-23169653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
206-384
               

               
Cow position:
               
chr18:43797065-43796889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
206-408
               

               
Cow position:
               
chr18:11313050-11312848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
212-399
               

               
Cow position:
               
chr18:35367292-35367114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
213-363
               

               
Cow position:
               
chr18:49015023-49015170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
213-410
               

               
Cow position:
               
chr18:49324528-49324347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
214-414
               

               
Cow position:
               
chr18:25598345-25598136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 189
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr18:17660660-17660480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
215-412
               

               
Cow position:
               
chr18:32189613-32189415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
215-487
               

               
Cow position:
               
chr18:53038724-53038999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr18:6130155-6129846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
221-400
               

               
Cow position:
               
chr18:22569164-22568984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
223-498
               

               
Cow position:
               
chr18:32252264-32252003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
229-507
               

               
Cow position:
               
chr18:9176812-9177096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
233-352
               

               
Cow position:
               
chr18:42954151-42954030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
234-396
               

               
Cow position:
               
chr18:52413879-52414045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
234-415
               

               
Cow position:
               
chr18:14830928-14830756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
238-399
               

               
Cow position:
               
chr18:23505251-23505412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-398
               

               
Cow position:
               
chr18:47705162-47705315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
244-398
               

               
Cow position:
               
chr18:50359258-50359412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
250-398
               

               
Cow position:
               
chr18:38937755-38937901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
253-396
               

               
Cow position:
               
chr18:52649411-52649269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
254-498
               

               
Cow position:
               
chr18:47548050-47547820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
236, 113
               

               
Conread position:
               
258-513
               

               
Cow position:
               
chr18:21081951-21081705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
232, 70
               

               
Conread position:
               
263-412
               

               
Cow position:
               
chr18:2773447-2773296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
263-412
               

               
Cow position:
               
chr18:2776950-2776799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
263-466
               

               
Cow position:
               
chr18:16378868-16379070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 158
               

               
Conread position:
               
266-437
               

               
Cow position:
               
chr18:44917705-44917874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
271-415
               

               
Cow position:
               
chr18:50632489-50632348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
277-513
               

               
Cow position:
               
chr18:11672002-11672231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
203, 61
               
Show alignments to all cow chromosomes.