Cow genome map

Conread name: Ss1.1-Mixn-0038g14.5

Conread position: 1-119
Cow position: chrX:45410300-45410181 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-120
Cow position: chrX:45955923-45956042 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 22

Conread position: 1-125
Cow position: chrX:29723193-29723315 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 1-127
Cow position: chrX:2351804-2351931 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 1-137
Cow position: chrX:41846792-41846651 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-148
Cow position: chrX:24102721-24102868 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 139

Conread position: 1-156
Cow position: chrX:48135138-48134984 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 26

Conread position: 1-159
Cow position: chrX:5856581-5856422 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 46

Conread position: 1-163
Cow position: chrX:27458997-27459165 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-165
Cow position: chrX:32871044-32870876 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 82

Conread position: 1-165
Cow position: chrX:47247167-47247005 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 138

Conread position: 1-166
Cow position: chrX:33822843-33823011 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 88

Conread position: 1-166
Cow position: chrX:39386523-39386354 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 17

Conread position: 1-167
Cow position: chrX:45959318-45959147 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-168
Cow position: chrX:30763677-30763513 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 1-169
Cow position: chrX:4629949-4629774 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-170
Cow position: chrX:16531741-16531909 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 1-170
Cow position: chrX:18990058-18989884 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-170
Cow position: chrX:22329829-22329658 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 165

Conread position: 1-170
Cow position: chrX:22873139-22873314 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-170
Cow position: chrX:24735680-24735854 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-170
Cow position: chrX:25283402-25283238 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 28

Conread position: 1-170
Cow position: chrX:32144421-32144253 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 124

Conread position: 1-170
Cow position: chrX:38794468-38794641 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 1-170
Cow position: chrX:39347044-39346870 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 1-170
Cow position: chrX:42841311-42841135 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 104

Conread position: 1-170
Cow position: chrX:48211238-48211064 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 13

Conread position: 1-172
Cow position: chrX:4325755-4325575 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-172
Cow position: chrX:10415784-10415613 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 133

Conread position: 1-173
Cow position: chrX:21255779-21255956 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 65

Conread position: 1-174
Cow position: chrX:2523988-2523809 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 1-180
Cow position: chrX:10916496-10916671 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 105

Conread position: 1-180
Cow position: chrX:33205250-33205072 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 138

Conread position: 1-181
Cow position: chrX:31473264-31473450 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 1-181
Cow position: chrX:37299338-37299523 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 62

Conread position: 1-182
Cow position: chrX:21795238-21795420 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 164, 0

Conread position: 1-189
Cow position: chrX:29864689-29864493 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 1-190
Cow position: chrX:22811628-22811822 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 1-198
Cow position: chrX:6012365-6012164 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 97

Conread position: 1-198
Cow position: chrX:31556756-31556554 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 196

Conread position: 1-204
Cow position: chrX:38151430-38151640 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 1-207
Cow position: chrX:32978515-32978308 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 103

Conread position: 1-208
Cow position: chrX:20653135-20653351 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 149

Conread position: 1-208
Cow position: chrX:21227214-21227425 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 1-210
Cow position: chrX:23061196-23061398 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 107, 0

Conread position: 1-213
Cow position: chrX:28517982-28517765 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 1-216
Cow position: chrX:1550692-1550913 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-217
Cow position: chrX:11581676-11581904 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 152

Conread position: 1-219
Cow position: chrX:48227873-48227647 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 1-222
Cow position: chrX:4123577-4123802 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 1-225
Cow position: chrX:24441505-24441275 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-228
Cow position: chrX:36778147-36778382 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 1-230
Cow position: chrX:2478885-2478651 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 32

Conread position: 1-230
Cow position: chrX:36692977-36693208 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 56, 190

Conread position: 1-230
Cow position: chrX:46680183-46679958 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 58

Conread position: 1-235
Cow position: chrX:16706544-16706784 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 139

Conread position: 1-235
Cow position: chrX:44980295-44980055 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 1-236
Cow position: chrX:6038180-6037939 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-236
Cow position: chrX:15120147-15119906 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-236
Cow position: chrX:20029989-20030235 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 1-236
Cow position: chrX:20353325-20353083 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-236
Cow position: chrX:23986986-23987227 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-236
Cow position: chrX:25741372-25741131 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 1-236
Cow position: chrX:29780487-29780724 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 108

Conread position: 1-236
Cow position: chrX:30159269-30159028 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 1-238
Cow position: chrX:38967392-38967628 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 1-241
Cow position: chrX:33020228-33020467 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 1-248
Cow position: chrX:47191653-47191421 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 19

Conread position: 1-249
Cow position: chrX:2786804-2786567 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 47

Conread position: 1-249
Cow position: chrX:42587687-42587437 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 174

Conread position: 1-250
Cow position: chrX:25419418-25419165 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 122, 16

Conread position: 1-251
Cow position: chrX:48287698-48287456 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 143, 71

Conread position: 1-252
Cow position: chrX:30141583-30141319 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 71

Conread position: 1-256
Cow position: chrX:21665851-21665595 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 237

Conread position: 1-257
Cow position: chrX:28097867-28098111 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 0

Conread position: 1-260
Cow position: chrX:33803274-33803002 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 183

Conread position: 1-261
Cow position: chrX:25848657-25848919 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 57

Conread position: 1-262
Cow position: chrX:32747400-32747689 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 1-263
Cow position: chrX:14819454-14819721 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 244

Conread position: 1-263
Cow position: chrX:32020380-32020113 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-263
Cow position: chrX:42086604-42086863 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 1-264
Cow position: chrX:1331674-1331945 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 262

Conread position: 1-264
Cow position: chrX:5047155-5046891 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 65

Conread position: 1-264
Cow position: chrX:11820100-11820358 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 127

Conread position: 1-264
Cow position: chrX:18078168-18077900 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 243

Conread position: 1-266
Cow position: chrX:2963792-2964058 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 149

Conread position: 1-266
Cow position: chrX:10915780-10916058 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 268

Conread position: 1-266
Cow position: chrX:11725525-11725251 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 247

Conread position: 1-266
Cow position: chrX:14846332-14846062 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 259

Conread position: 1-266
Cow position: chrX:16835219-16835484 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 215

Conread position: 1-266
Cow position: chrX:18950003-18949731 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 204

Conread position: 1-266
Cow position: chrX:26759827-26759557 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 264

Conread position: 1-266
Cow position: chrX:30531290-30531016 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 128

Conread position: 1-266
Cow position: chrX:38051690-38051425 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 241

Conread position: 1-266
Cow position: chrX:39559910-39559640 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 259

Conread position: 1-266
Cow position: chrX:43648002-43647740 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 55, 101

Conread position: 1-266
Cow position: chrX:44096295-44096564 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 258

Conread position: 1-266
Cow position: chrX:48205171-48204909 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 177

Conread position: 1-267
Cow position: chrX:23024446-23024712 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 28

Conread position: 1-268
Cow position: chrX:39704446-39704708 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 56, 37

Conread position: 1-269
Cow position: chrX:17271547-17271274 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 215

Conread position: 1-269
Cow position: chrX:25452291-25452556 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 1-270
Cow position: chrX:48675818-48676090 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 8, 191

Conread position: 1-271
Cow position: chrX:7551053-7550777 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 242

Conread position: 1-271
Cow position: chrX:9096409-9096684 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 123, 142

Conread position: 1-271
Cow position: chrX:29848889-29848618 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 213

Conread position: 1-271
Cow position: chrX:30228369-30228094 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 215

Conread position: 1-271
Cow position: chrX:37133792-37133515 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 261

Conread position: 1-274
Cow position: chrX:11949751-11949479 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 210

Conread position: 1-274
Cow position: chrX:35409410-35409676 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 53

Conread position: 1-274
Cow position: chrX:45786872-45787148 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 123, 58

Conread position: 1-275
Cow position: chrX:23386797-23386525 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 64

Conread position: 1-279
Cow position: chrX:20582772-20583043 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 124

Conread position: 1-279
Cow position: chrX:40647720-40648007 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 262

Conread position: 1-279
Cow position: chrX:48370838-48371112 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 50, 146

Conread position: 1-282
Cow position: chrX:25237920-25238194 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 32

Conread position: 1-292
Cow position: chrX:10095768-10096066 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 58, 183

Conread position: 1-294
Cow position: chrX:23280748-23281044 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 258

Conread position: 1-295
Cow position: chrX:38439215-38439518 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-296
Cow position: chrX:1946979-1946676 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 261

Conread position: 1-298
Cow position: chrX:14924742-14925040 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 78

Conread position: 1-299
Cow position: chrX:18999640-18999929 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 168, 55

Conread position: 1-300
Cow position: chrX:2664751-2665055 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 259

Conread position: 1-300
Cow position: chrX:37958239-37958543 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 259

Conread position: 1-302
Cow position: chrX:17497838-17498129 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 125

Conread position: 1-305
Cow position: chrX:34285321-34285012 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 259

Conread position: 1-306
Cow position: chrX:27095861-27096163 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 98

Conread position: 1-307
Cow position: chrX:10755953-10756256 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 58

Conread position: 1-308
Cow position: chrX:19015184-19015487 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 112

Conread position: 1-308
Cow position: chrX:40452471-40452168 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 248

Conread position: 1-308
Cow position: chrX:42462006-42461694 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-308
Cow position: chrX:42994356-42994663 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 98

Conread position: 1-310
Cow position: chrX:8899766-8900079 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 238

Conread position: 1-311
Cow position: chrX:24317808-24318116 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 37

Conread position: 1-311
Cow position: chrX:48243710-48243413 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 100

Conread position: 1-312
Cow position: chrX:15590130-15589817 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 256

Conread position: 1-312
Cow position: chrX:23572058-23571739 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 1-312
Cow position: chrX:28105664-28105972 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 134, 35

Conread position: 1-312
Cow position: chrX:28845586-28845887 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 103

Conread position: 1-312
Cow position: chrX:42733607-42733912 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 136

Conread position: 1-314
Cow position: chrX:42874720-42875039 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 260

Conread position: 1-316
Cow position: chrX:10428281-10428601 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 259

Conread position: 1-316
Cow position: chrX:12347620-12347936 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 190

Conread position: 1-316
Cow position: chrX:26275881-26276200 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 245

Conread position: 1-316
Cow position: chrX:30823258-30823578 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 12

Conread position: 1-317
Cow position: chrX:24280677-24281006 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 265

Conread position: 1-318
Cow position: chrX:3405613-3405308 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 167, 54

Conread position: 1-318
Cow position: chrX:19188678-19188991 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 144

Conread position: 1-318
Cow position: chrX:34754450-34754131 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 215

Conread position: 1-319
Cow position: chrX:35609728-35610053 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-321
Cow position: chrX:22888400-22888724 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 244

Conread position: 1-321
Cow position: chrX:37816330-37816655 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 259

Conread position: 1-322
Cow position: chrX:6675183-6674855 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 51

Conread position: 1-322
Cow position: chrX:34192422-34192734 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 26

Conread position: 1-323
Cow position: chrX:12018017-12018357 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-323
Cow position: chrX:30162739-30163065 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 251

Conread position: 1-323
Cow position: chrX:39174471-39174154 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 168, 194

Conread position: 1-324
Cow position: chrX:8782486-8782814 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 133

Conread position: 1-324
Cow position: chrX:20038476-20038149 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 148

Conread position: 1-324
Cow position: chrX:20742728-20743056 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 259

Conread position: 1-324
Cow position: chrX:27751493-27751170 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 171

Conread position: 1-324
Cow position: chrX:27997392-27997716 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 56

Conread position: 1-324
Cow position: chrX:39714291-39714619 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 210
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 259

Conread position: 1-336
Cow position: chrX:24105368-24105702 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 210

Conread position: 1-342
Cow position: chrX:48800279-48800622 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 38

Conread position: 1-344
Cow position: chrX:16734299-16734646 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 58

Conread position: 1-344
Cow position: chrX:37416333-37415986 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 314

Conread position: 1-346
Cow position: chrX:28646243-28645906 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 31

Conread position: 1-347
Cow position: chrX:16703412-16703763 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 286

Conread position: 1-347
Cow position: chrX:16711696-16712047 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 243

Conread position: 1-348
Cow position: chrX:7053993-7053646 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 70, 14

Conread position: 1-348
Cow position: chrX:16783236-16783581 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 168, 55

Conread position: 1-348
Cow position: chrX:19290514-19290852 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 168, 55

Conread position: 1-348
Cow position: chrX:20945310-20945655 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 64

Conread position: 1-348
Cow position: chrX:29942893-29943243 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 147

Conread position: 1-349
Cow position: chrX:1810419-1810072 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 95

Conread position: 1-349
Cow position: chrX:30133582-30133227 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 86

Conread position: 1-349
Cow position: chrX:31729200-31729533 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 55

Conread position: 1-350
Cow position: chrX:2945126-2944772 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 259

Conread position: 1-350
Cow position: chrX:32171140-32170797 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 107

Conread position: 1-350
Cow position: chrX:47211108-47210745 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 65

Conread position: 1-350
Cow position: chrX:48248565-48248915 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 222

Conread position: 1-351
Cow position: chrX:488232-488597 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 1-351
Cow position: chrX:1055646-1055288 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 55

Conread position: 1-351
Cow position: chrX:2425380-2425025 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 257

Conread position: 1-351
Cow position: chrX:2467622-2467977 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 1-351
Cow position: chrX:8730821-8731186 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 296

Conread position: 1-351
Cow position: chrX:14162933-14163301 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 1-351
Cow position: chrX:14221825-14222168 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 37

Conread position: 1-351
Cow position: chrX:14407708-14407355 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 227
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 65

Conread position: 1-351
Cow position: chrX:15545639-15545975 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 55

Conread position: 1-351
Cow position: chrX:16078411-16078754 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 223
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 66

Conread position: 1-351
Cow position: chrX:16853647-16853288 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 265

Conread position: 1-351
Cow position: chrX:18194655-18195008 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 55, 255

Conread position: 1-351
Cow position: chrX:18244731-18245079 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 37

Conread position: 1-351
Cow position: chrX:20878021-20877666 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 243

Conread position: 1-351
Cow position: chrX:21415830-21416196 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 326

Conread position: 1-351
Cow position: chrX:21833627-21833982 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 245

Conread position: 1-351
Cow position: chrX:22538212-22537851 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 148

Conread position: 1-351
Cow position: chrX:23122126-23122488 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 50, 291

Conread position: 1-351
Cow position: chrX:23299696-23300051 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 259

Conread position: 1-351
Cow position: chrX:23396348-23396695 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 64

Conread position: 1-351
Cow position: chrX:23451429-23451072 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 238

Conread position: 1-351
Cow position: chrX:23564055-23563698 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 250

Conread position: 1-351
Cow position: chrX:24587712-24587357 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 261

Conread position: 1-351
Cow position: chrX:27977087-27976734 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 222
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 284

Conread position: 1-351
Cow position: chrX:30454880-30454525 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 257

Conread position: 1-351
Cow position: chrX:31202582-31202937 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 64

Conread position: 1-351
Cow position: chrX:32584071-32583716 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 259

Conread position: 1-351
Cow position: chrX:35240606-35240958 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 149

Conread position: 1-351
Cow position: chrX:37843462-37843810 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 218

Conread position: 1-351
Cow position: chrX:40544868-40544511 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 263

Conread position: 1-351
Cow position: chrX:41103530-41103887 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 241

Conread position: 1-351
Cow position: chrX:41157053-41157408 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 97

Conread position: 1-351
Cow position: chrX:45404092-45403732 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-351
Cow position: chrX:46579113-46578758 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 260

Conread position: 1-351
Cow position: chrX:47344036-47344389 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 154

Conread position: 1-351
Cow position: chrX:47967342-47967700 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 1-352
Cow position: chrX:20340149-20339798 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 112

Conread position: 1-352
Cow position: chrX:27516275-27516615 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 1-354
Cow position: chrX:28134091-28134434 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 12

Conread position: 1-354
Cow position: chrX:46032976-46032631 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 49

Conread position: 1-355
Cow position: chrX:16762514-16762868 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 17

Conread position: 1-355
Cow position: chrX:17541706-17542058 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 143

Conread position: 1-355
Cow position: chrX:26441038-26440688 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 264

Conread position: 1-358
Cow position: chrX:12826489-12826850 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 191

Conread position: 1-358
Cow position: chrX:22812804-22813162 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 55

Conread position: 1-358
Cow position: chrX:26492744-26493106 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 262

Conread position: 1-359
Cow position: chrX:21062958-21063325 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 157

Conread position: 1-360
Cow position: chrX:754700-755066 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-364
Cow position: chrX:4269326-4268957 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 247

Conread position: 1-364
Cow position: chrX:23583300-23583668 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 199

Conread position: 1-364
Cow position: chrX:30180184-30179828 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 149

Conread position: 1-364
Cow position: chrX:31449880-31449512 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 208

Conread position: 1-364
Cow position: chrX:38102702-38102339 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 123, 182

Conread position: 1-365
Cow position: chrX:7646000-7646358 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 121

Conread position: 1-365
Cow position: chrX:25337919-25338294 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 362

Conread position: 1-365
Cow position: chrX:28787109-28787456 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 1-365
Cow position: chrX:30143543-30143173 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 257

Conread position: 1-365
Cow position: chrX:36010150-36009806 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 54

Conread position: 1-365
Cow position: chrX:38227348-38227002 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 118

Conread position: 1-365
Cow position: chrX:46771230-46770855 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 248

Conread position: 1-366
Cow position: chrX:161170-161520 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 1-366
Cow position: chrX:11082871-11082514 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 196

Conread position: 1-366
Cow position: chrX:20151592-20151964 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 115

Conread position: 1-366
Cow position: chrX:31260889-31260506 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 1-366
Cow position: chrX:32309843-32310214 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 193

Conread position: 1-366
Cow position: chrX:38577275-38577623 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 27

Conread position: 1-366
Cow position: chrX:38936441-38936808 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 176

Conread position: 1-367
Cow position: chrX:34454411-34454765 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 99

Conread position: 1-371
Cow position: chrX:13912821-13913188 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 134

Conread position: 1-372
Cow position: chrX:44087046-44087411 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 204

Conread position: 1-382
Cow position: chrX:45089179-45089568 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 87

Conread position: 1-382
Cow position: chrX:45414558-45414180 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 251

Conread position: 1-382
Cow position: chrX:48195299-48194913 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 369

Conread position: 1-384
Cow position: chrX:917628-917242 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 1-384
Cow position: chrX:18695179-18694805 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 140

Conread position: 1-384
Cow position: chrX:34532273-34532646 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 46

Conread position: 1-384
Cow position: chrX:35224044-35224422 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 62

Conread position: 1-384
Cow position: chrX:42470195-42469815 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 120

Conread position: 1-385
Cow position: chrX:15596780-15597153 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 209

Conread position: 1-390
Cow position: chrX:47873599-47873205 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 87

Conread position: 1-391
Cow position: chrX:35413372-35413744 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 120

Conread position: 1-392
Cow position: chrX:6543998-6544388 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 218

Conread position: 1-392
Cow position: chrX:47481540-47481930 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 265

Conread position: 1-394
Cow position: chrX:40183608-40183219 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 250

Conread position: 1-395
Cow position: chrX:10412244-10411847 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 63

Conread position: 1-397
Cow position: chrX:41122814-41123198 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 113

Conread position: 1-397
Cow position: chrX:45501890-45502285 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 1-397
Cow position: chrX:46073071-46072678 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 26

Conread position: 1-398
Cow position: chrX:11718038-11717643 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 55

Conread position: 1-398
Cow position: chrX:12290478-12290859 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 1-398
Cow position: chrX:29289318-29289718 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 193

Conread position: 1-398
Cow position: chrX:31443079-31442689 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 197

Conread position: 1-398
Cow position: chrX:35268632-35269001 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 55, 81

Conread position: 1-398
Cow position: chrX:38007026-38006631 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 90

Conread position: 1-398
Cow position: chrX:45430276-45429882 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 1-399
Cow position: chrX:15329395-15329783 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 139

Conread position: 1-399
Cow position: chrX:20801520-20801910 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 267
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 41

Conread position: 1-400
Cow position: chrX:15147444-15147055 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 89

Conread position: 1-400
Cow position: chrX:27509278-27508884 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 181

Conread position: 1-400
Cow position: chrX:36311341-36311711 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 168, 46

Conread position: 1-401
Cow position: chrX:41790698-41790286 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 134, 31

Conread position: 1-405
Cow position: chrX:34554472-34554868 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 37

Conread position: 1-406
Cow position: chrX:14884222-14883805 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 382

Conread position: 1-406
Cow position: chrX:41192432-41192850 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 37

Conread position: 1-408
Cow position: chrX:15007409-15006998 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 102

Conread position: 1-410
Cow position: chrX:45967904-45968299 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 55, 120

Conread position: 1-412
Cow position: chrX:17725720-17726128 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 55

Conread position: 1-414
Cow position: chrX:31436222-31436628 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 121

Conread position: 1-414
Cow position: chrX:34238463-34238876 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 196

Conread position: 1-415
Cow position: chrX:31489254-31489679 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 1-421
Cow position: chrX:8796992-8797410 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 11

Conread position: 1-421
Cow position: chrX:10866125-10865708 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 128

Conread position: 1-423
Cow position: chrX:4996353-4996752 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 82

Conread position: 1-423
Cow position: chrX:35273086-35273536 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 209

Conread position: 1-425
Cow position: chrX:30338181-30337790 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 23

Conread position: 1-425
Cow position: chrX:37072148-37072558 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 106

Conread position: 1-426
Cow position: chrX:41879189-41878768 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 55

Conread position: 1-439
Cow position: chrX:31250134-31250565 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 58

Conread position: 1-469
Cow position: chrX:31373316-31373747 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 106

Conread position: 1-475
Cow position: chrX:27761082-27761567 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 304
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 262

Conread position: 1-478
Cow position: chrX:16713939-16714417 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 298
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 185

Conread position: 1-478
Cow position: chrX:16722060-16721589 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 303
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 127

Conread position: 1-478
Cow position: chrX:27498510-27498995 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 309
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 56, 259

Conread position: 1-480
Cow position: chrX:31294798-31294366 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-481
Cow position: chrX:35533593-35534080 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 307
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 259

Conread position: 1-488
Cow position: chrX:10831770-10831268 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 391

Conread position: 1-497
Cow position: chrX:40269218-40269731 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 438

Conread position: 1-499
Cow position: chrX:7695505-7695988 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 11

Conread position: 1-503
Cow position: chrX:2933464-2933973 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 320
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 126, 53

Conread position: 1-505
Cow position: chrX:5017664-5017184 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 1-506
Cow position: chrX:47362144-47361637 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 309
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 139

Conread position: 1-513
Cow position: chrX:4633110-4632615 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 119

Conread position: 1-513
Cow position: chrX:40481131-40480609 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 1-517
Cow position: chrX:22821156-22821679 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 321
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 259

Conread position: 1-535
Cow position: chrX:28513814-28514359 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 336
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 131, 154

Conread position: 2-143
Cow position: chrX:12096504-12096367 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 2-163
Cow position: chrX:45420932-45420764 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 2-170
Cow position: chrX:7118902-7118728 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 2-170
Cow position: chrX:34009492-34009662 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 60

Conread position: 2-170
Cow position: chrX:46448086-46447916 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 67

Conread position: 2-173
Cow position: chrX:26619620-26619446 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 2-179
Cow position: chrX:5892970-5893154 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 2-230
Cow position: chrX:45043301-45043533 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 175

Conread position: 2-236
Cow position: chrX:26531701-26531941 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 2-243
Cow position: chrX:3653506-3653744 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 52, 154

Conread position: 2-263
Cow position: chrX:19023179-19023449 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 58

Conread position: 2-264
Cow position: chrX:25458894-25458624 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 2-266
Cow position: chrX:21011580-21011309 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 265

Conread position: 2-275
Cow position: chrX:16289819-16289541 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 55, 258

Conread position: 2-279
Cow position: chrX:44835073-44834784 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 2-291
Cow position: chrX:46382033-46381744 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 138

Conread position: 2-298
Cow position: chrX:47379724-47379427 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 70

Conread position: 2-301
Cow position: chrX:17743806-17744105 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 25

Conread position: 2-343
Cow position: chrX:5638426-5638084 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 191

Conread position: 2-350
Cow position: chrX:18118729-18118376 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 223
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 242

Conread position: 2-351
Cow position: chrX:22493750-22494104 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 256

Conread position: 2-354
Cow position: chrX:43527246-43527604 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 266

Conread position: 2-357
Cow position: chrX:47144825-47145184 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 36, 184

Conread position: 2-358
Cow position: chrX:21064029-21064383 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 2-363
Cow position: chrX:31949188-31948830 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 123

Conread position: 2-364
Cow position: chrX:4905246-4904881 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 148

Conread position: 2-366
Cow position: chrX:9161331-9161683 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 118

Conread position: 2-383
Cow position: chrX:2160507-2160894 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 248
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 12, 259

Conread position: 2-389
Cow position: chrX:7571649-7572036 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 2-396
Cow position: chrX:30543539-30543146 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 36

Conread position: 2-397
Cow position: chrX:9651302-9650885 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 2-414
Cow position: chrX:27705336-27705740 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 62

Conread position: 2-415
Cow position: chrX:22482946-22482531 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 215

Conread position: 2-421
Cow position: chrX:151644-152063 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 101

Conread position: 2-503
Cow position: chrX:40557933-40557429 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 2-524
Cow position: chrX:6655524-6654989 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 336
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 242

Conread position: 3-170
Cow position: chrX:29925832-29925668 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 3-170
Cow position: chrX:30919648-30919476 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 3-219
Cow position: chrX:16529749-16529971 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 3-238
Cow position: chrX:18293676-18293901 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 3-251
Cow position: chrX:158025-157781 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 141, 35

Conread position: 3-251
Cow position: chrX:35388163-35387909 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 3-257
Cow position: chrX:45399754-45399490 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 3-258
Cow position: chrX:7718596-7718855 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 154

Conread position: 3-259
Cow position: chrX:14908760-14909017 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 53

Conread position: 3-266
Cow position: chrX:9227240-9226970 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-266
Cow position: chrX:45932748-45933016 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 260

Conread position: 3-266
Cow position: chrX:46425009-46424742 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 69

Conread position: 3-275
Cow position: chrX:46606766-46606492 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 52

Conread position: 3-284
Cow position: chrX:28157229-28157526 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 154

Conread position: 3-298
Cow position: chrX:12115785-12116087 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 26

Conread position: 3-313
Cow position: chrX:34990785-34991091 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 3-324
Cow position: chrX:12466239-12466563 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 102

Conread position: 3-342
Cow position: chrX:28632734-28632401 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 56, 14

Conread position: 3-350
Cow position: chrX:23264693-23264341 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 259

Conread position: 3-351
Cow position: chrX:5376113-5376467 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 82

Conread position: 3-351
Cow position: chrX:18897907-18897558 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 56

Conread position: 3-351
Cow position: chrX:21785511-21785867 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 287

Conread position: 3-351
Cow position: chrX:32094706-32094353 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 255

Conread position: 3-354
Cow position: chrX:3654348-3654704 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 3-357
Cow position: chrX:39546229-39545880 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 63

Conread position: 3-358
Cow position: chrX:17042432-17042782 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 10, 17

Conread position: 3-358
Cow position: chrX:25713545-25713895 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 28

Conread position: 3-365
Cow position: chrX:7496989-7497349 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 47

Conread position: 3-366
Cow position: chrX:19689962-19690323 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 184

Conread position: 3-397
Cow position: chrX:38094781-38094381 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 90

Conread position: 3-398
Cow position: chrX:34401741-34402146 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 269

Conread position: 3-398
Cow position: chrX:41238619-41238215 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 53

Conread position: 3-406
Cow position: chrX:24424649-24424255 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 3-415
Cow position: chrX:6413790-6414196 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 92

Conread position: 3-415
Cow position: chrX:33466361-33466782 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 44

Conread position: 3-415
Cow position: chrX:34376701-34377097 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 80

Conread position: 3-475
Cow position: chrX:27480883-27480414 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 300
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 33

Conread position: 3-478
Cow position: chrX:27106002-27106473 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 312
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 274

Conread position: 3-514
Cow position: chrX:38072027-38071518 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 240

Conread position: 4-234
Cow position: chrX:12249546-12249778 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 104

Conread position: 4-246
Cow position: chrX:45693851-45694091 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 52, 170

Conread position: 4-269
Cow position: chrX:43408746-43409016 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 91, 34

Conread position: 4-349
Cow position: chrX:20376714-20377062 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 25

Conread position: 4-398
Cow position: chrX:14599279-14599672 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 5

Conread position: 4-399
Cow position: chrX:14973987-14973605 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 44

Conread position: 4-399
Cow position: chrX:35288405-35288796 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 49, 101

Conread position: 4-404
Cow position: chrX:1616306-1615902 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 258

Conread position: 5-137
Cow position: chrX:5556085-5555953 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-174
Cow position: chrX:30863454-30863278 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 5-179
Cow position: chrX:29877436-29877255 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 5-187
Cow position: chrX:30965846-30966034 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 186

Conread position: 5-190
Cow position: chrX:22567277-22567469 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 5-190
Cow position: chrX:29907484-29907293 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 5-201
Cow position: chrX:15091022-15090819 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 5-214
Cow position: chrX:5112811-5112596 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 198

Conread position: 5-224
Cow position: chrX:23452853-23452627 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 5-225
Cow position: chrX:15346224-15345997 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 5-225
Cow position: chrX:30021353-30021126 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 5-225
Cow position: chrX:37852880-37853101 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 208

Conread position: 5-225
Cow position: chrX:47386186-47385960 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 5-228
Cow position: chrX:24173423-24173191 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 5-230
Cow position: chrX:30950273-30950505 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 5-236
Cow position: chrX:2104150-2104384 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 5-236
Cow position: chrX:3372113-3371875 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 5-236
Cow position: chrX:3464331-3464095 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 91

Conread position: 5-236
Cow position: chrX:10932417-10932655 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 5-236
Cow position: chrX:14152470-14152240 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 148

Conread position: 5-236
Cow position: chrX:15114416-15114654 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 5-236
Cow position: chrX:15531410-15531172 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 5-236
Cow position: chrX:20321022-20320785 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 5-236
Cow position: chrX:23215852-23216090 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 5-236
Cow position: chrX:29083870-29084103 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 10

Conread position: 5-236
Cow position: chrX:31978101-31977863 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 5-239
Cow position: chrX:4869288-4869529 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 5-241
Cow position: chrX:39556071-39555854 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 125

Conread position: 5-250
Cow position: chrX:160287-160040 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 51

Conread position: 5-252
Cow position: chrX:361708-361454 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 5-252
Cow position: chrX:23047525-23047777 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 5-252
Cow position: chrX:29356332-29356586 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 5-255
Cow position: chrX:18223158-18223408 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 229

Conread position: 5-255
Cow position: chrX:29066186-29066442 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 5-255
Cow position: chrX:29226221-29226476 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 212

Conread position: 5-261
Cow position: chrX:15008687-15008427 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 186

Conread position: 5-261
Cow position: chrX:24509612-24509874 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 256

Conread position: 5-261
Cow position: chrX:24577820-24577558 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-261
Cow position: chrX:27469909-27469647 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-261
Cow position: chrX:32039098-32038836 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 256

Conread position: 5-262
Cow position: chrX:9085588-9085324 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 5-264
Cow position: chrX:31605429-31605694 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 256

Conread position: 5-264
Cow position: chrX:43101272-43101535 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 213

Conread position: 5-265
Cow position: chrX:2580144-2580410 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 257

Conread position: 5-265
Cow position: chrX:34519471-34519737 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:3361564-3361830 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 252

Conread position: 5-266
Cow position: chrX:3417394-3417128 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 260

Conread position: 5-266
Cow position: chrX:4404280-4404544 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 178

Conread position: 5-266
Cow position: chrX:5123616-5123349 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 9, 259

Conread position: 5-266
Cow position: chrX:5306344-5306611 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:7509882-7510148 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 255

Conread position: 5-266
Cow position: chrX:7755646-7755913 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:8530285-8530552 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:14134220-14134487 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 68

Conread position: 5-266
Cow position: chrX:16279394-16279661 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 257

Conread position: 5-266
Cow position: chrX:16466045-16466313 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 257

Conread position: 5-266
Cow position: chrX:17783244-17783511 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 257

Conread position: 5-266
Cow position: chrX:22078072-22078339 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:24413775-24414042 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:24769115-24768852 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 62

Conread position: 5-266
Cow position: chrX:26709349-26709616 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:27422536-27422270 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 80

Conread position: 5-266
Cow position: chrX:28559090-28558823 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 31

Conread position: 5-266
Cow position: chrX:30816524-30816257 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 257

Conread position: 5-266
Cow position: chrX:31814144-31813877 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 256

Conread position: 5-266
Cow position: chrX:39549075-39549332 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 121

Conread position: 5-266
Cow position: chrX:42591470-42591739 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 5-266
Cow position: chrX:45263323-45263057 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 96

Conread position: 5-266
Cow position: chrX:45903923-45904190 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 256

Conread position: 5-266
Cow position: chrX:47318151-47318416 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 240

Conread position: 5-266
Cow position: chrX:47608159-47608426 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-267
Cow position: chrX:13686462-13686735 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 34

Conread position: 5-267
Cow position: chrX:22613131-22613403 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 5-267
Cow position: chrX:29169589-29169321 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-267
Cow position: chrX:35803559-35803825 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 186

Conread position: 5-275
Cow position: chrX:2274662-2274938 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:3658309-3658033 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 11, 256

Conread position: 5-275
Cow position: chrX:6558595-6558871 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 167

Conread position: 5-275
Cow position: chrX:9168869-9168595 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 240

Conread position: 5-275
Cow position: chrX:10351606-10351881 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 259

Conread position: 5-275
Cow position: chrX:12360634-12360910 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 186

Conread position: 5-275
Cow position: chrX:15172786-15172512 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 52

Conread position: 5-275
Cow position: chrX:16478647-16478923 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 256

Conread position: 5-275
Cow position: chrX:19109296-19109020 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:19333424-19333148 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:19495215-19494939 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:23109504-23109778 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 212

Conread position: 5-275
Cow position: chrX:23140055-23140330 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 255

Conread position: 5-275
Cow position: chrX:25276754-25276478 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 265

Conread position: 5-275
Cow position: chrX:27627100-27627374 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 240

Conread position: 5-275
Cow position: chrX:28555690-28555414 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 256

Conread position: 5-275
Cow position: chrX:34175453-34175177 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:34333455-34333179 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:34413521-34413797 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:36730129-36730407 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 258

Conread position: 5-275
Cow position: chrX:36820487-36820211 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 256

Conread position: 5-275
Cow position: chrX:37061046-37060770 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 256

Conread position: 5-275
Cow position: chrX:42121048-42121324 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 256

Conread position: 5-275
Cow position: chrX:42779381-42779105 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-275
Cow position: chrX:43979363-43979641 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 258

Conread position: 5-284
Cow position: chrX:9997587-9997308 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 117

Conread position: 5-292
Cow position: chrX:45412907-45412627 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 52, 21

Conread position: 5-297
Cow position: chrX:5646359-5646060 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-297
Cow position: chrX:11358320-11358024 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 240

Conread position: 5-297
Cow position: chrX:22608847-22608548 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-297
Cow position: chrX:30538407-30538108 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 256

Conread position: 5-298
Cow position: chrX:18024784-18025082 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 244

Conread position: 5-300
Cow position: chrX:1749764-1749463 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:1975852-1975552 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 230

Conread position: 5-300
Cow position: chrX:2362244-2362545 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:2417739-2417438 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:3078842-3078542 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 95

Conread position: 5-300
Cow position: chrX:3157363-3157664 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:3387851-3388152 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 186

Conread position: 5-300
Cow position: chrX:7311738-7312039 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:9018558-9018257 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:10922826-10922525 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:11860497-11860196 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 256

Conread position: 5-300
Cow position: chrX:12032716-12033017 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 256

Conread position: 5-300
Cow position: chrX:13385152-13385454 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 5-300
Cow position: chrX:13448015-13448316 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:15781326-15781627 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 256

Conread position: 5-300
Cow position: chrX:18451334-18451045 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 121

Conread position: 5-300
Cow position: chrX:19774735-19774434 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 256

Conread position: 5-300
Cow position: chrX:20099067-20099368 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:24903829-24904130 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 85

Conread position: 5-300
Cow position: chrX:24967014-24967315 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:28058050-28057749 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:29844731-29844430 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:30899642-30899341 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:33764089-33764390 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:33983861-33983560 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:34095306-34095607 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:35497831-35498132 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:36479677-36479978 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 256

Conread position: 5-300
Cow position: chrX:37497702-37497401 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:37772689-37772387 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 257

Conread position: 5-300
Cow position: chrX:38442707-38443008 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:39667448-39667147 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:41414039-41413738 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-300
Cow position: chrX:41488420-41488120 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 230

Conread position: 5-300
Cow position: chrX:48165268-48165569 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 57

Conread position: 5-302
Cow position: chrX:1781650-1781954 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 257

Conread position: 5-302
Cow position: chrX:10495978-10496281 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:1576518-1576212 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:5334075-5333771 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 260

Conread position: 5-305
Cow position: chrX:5866891-5867196 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 103

Conread position: 5-305
Cow position: chrX:7742712-7742408 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 240

Conread position: 5-305
Cow position: chrX:11672526-11672832 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:11715717-11715411 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:13396507-13396202 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 240

Conread position: 5-305
Cow position: chrX:15505036-15505342 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:16735269-16735575 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 140

Conread position: 5-305
Cow position: chrX:17605816-17605510 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:20032086-20031783 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 121

Conread position: 5-305
Cow position: chrX:22549049-22549353 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 240

Conread position: 5-305
Cow position: chrX:23703020-23702714 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:27759452-27759758 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:36240140-36240446 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:39731258-39731564 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:44168564-44168258 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-305
Cow position: chrX:48328642-48328336 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 256

Conread position: 5-307
Cow position: chrX:30940926-30941236 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 5-309
Cow position: chrX:671264-670954 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 257

Conread position: 5-311
Cow position: chrX:22557246-22557558 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-313
Cow position: chrX:6196009-6195695 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 256

Conread position: 5-313
Cow position: chrX:10293417-10293103 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 253

Conread position: 5-313
Cow position: chrX:22915211-22915525 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-313
Cow position: chrX:27404201-27403887 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:2812667-2812350 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 261

Conread position: 5-316
Cow position: chrX:4622209-4621892 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 256

Conread position: 5-316
Cow position: chrX:5288942-5288625 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:5739468-5739151 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 257

Conread position: 5-316
Cow position: chrX:6566819-6567136 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:7486609-7486926 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:8483833-8484138 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 51

Conread position: 5-316
Cow position: chrX:8641533-8641849 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 255

Conread position: 5-316
Cow position: chrX:9128801-9129118 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:10528029-10527713 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 104

Conread position: 5-316
Cow position: chrX:12850877-12851194 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:13070857-13070540 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 68

Conread position: 5-316
Cow position: chrX:13091417-13091100 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 257

Conread position: 5-316
Cow position: chrX:14781600-14781283 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:18462230-18461914 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 181

Conread position: 5-316
Cow position: chrX:19473416-19473098 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 257

Conread position: 5-316
Cow position: chrX:20021308-20021625 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 252

Conread position: 5-316
Cow position: chrX:20617052-20616735 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:25288934-25288617 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 257

Conread position: 5-316
Cow position: chrX:26974655-26974972 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:30171965-30171648 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:30197042-30197359 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 256

Conread position: 5-316
Cow position: chrX:30981420-30981103 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 257

Conread position: 5-316
Cow position: chrX:38014839-38015156 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 256

Conread position: 5-316
Cow position: chrX:38230522-38230205 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 256

Conread position: 5-316
Cow position: chrX:40591431-40591738 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 121

Conread position: 5-316
Cow position: chrX:43511165-43511481 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 255

Conread position: 5-316
Cow position: chrX:43767792-43767475 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 257

Conread position: 5-316
Cow position: chrX:44557824-44558141 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-317
Cow position: chrX:17995204-17995522 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-318
Cow position: chrX:27704508-27704189 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-320
Cow position: chrX:23235575-23235895 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 256

Conread position: 5-320
Cow position: chrX:37764452-37764132 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 266

Conread position: 5-321
Cow position: chrX:828636-828954 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 121

Conread position: 5-321
Cow position: chrX:2499595-2499279 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 243

Conread position: 5-321
Cow position: chrX:5300637-5300959 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 186

Conread position: 5-321
Cow position: chrX:11663923-11664245 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 256

Conread position: 5-321
Cow position: chrX:13971482-13971160 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 257

Conread position: 5-321
Cow position: chrX:14409642-14409322 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 203

Conread position: 5-321
Cow position: chrX:15577896-15577574 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 257

Conread position: 5-321
Cow position: chrX:16074321-16074643 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-321
Cow position: chrX:17055314-17055636 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 257

Conread position: 5-321
Cow position: chrX:22815686-22816008 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 257

Conread position: 5-323
Cow position: chrX:19022564-19022240 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 256

Conread position: 5-328
Cow position: chrX:12776241-12775913 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 150

Conread position: 5-329
Cow position: chrX:16808011-16807683 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 209

Conread position: 5-332
Cow position: chrX:16285954-16286288 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 201

Conread position: 5-333
Cow position: chrX:32010776-32011111 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 201

Conread position: 5-347
Cow position: chrX:14598590-14598938 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 226
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 256

Conread position: 5-347
Cow position: chrX:30822329-30822677 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 256

Conread position: 5-351
Cow position: chrX:3649063-3648721 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 51, 120

Conread position: 5-351
Cow position: chrX:21768549-21768900 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 186

Conread position: 5-356
Cow position: chrX:40180125-40179781 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 103, 52

Conread position: 5-367
Cow position: chrX:30199247-30198882 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-369
Cow position: chrX:14463058-14463429 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 235
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 256

Conread position: 5-369
Cow position: chrX:22772400-22772771 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 256

Conread position: 5-369
Cow position: chrX:35612799-35612429 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 21

Conread position: 5-382
Cow position: chrX:42165820-42166203 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 247
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 256

Conread position: 5-383
Cow position: chrX:11145593-11145209 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 241
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 56

Conread position: 5-383
Cow position: chrX:36931063-36931442 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 243
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 51

Conread position: 5-402
Cow position: chrX:12309643-12309243 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 155

Conread position: 6-166
Cow position: chrX:501841-501675 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 6-170
Cow position: chrX:7382070-7382235 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 140
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 6-170
Cow position: chrX:33886113-33886275 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 26

Conread position: 6-172
Cow position: chrX:12852762-12852592 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 6-172
Cow position: chrX:16847142-16846974 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 51

Conread position: 6-181
Cow position: chrX:3161269-3161090 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 6-204
Cow position: chrX:126539-126735 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 134

Conread position: 6-216
Cow position: chrX:7806124-7806338 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 79

Conread position: 6-227
Cow position: chrX:24482624-24482399 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 6-254
Cow position: chrX:12179715-12179963 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 41

Conread position: 6-257
Cow position: chrX:11806270-11806015 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 253

Conread position: 6-264
Cow position: chrX:48247087-48246843 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 52

Conread position: 6-265
Cow position: chrX:19196772-19196507 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 200

Conread position: 6-266
Cow position: chrX:11498879-11498613 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 256

Conread position: 6-267
Cow position: chrX:5127667-5127911 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 6-281
Cow position: chrX:45674591-45674865 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 203

Conread position: 6-292
Cow position: chrX:41743660-41743948 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 126

Conread position: 6-302
Cow position: chrX:36250115-36249817 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 6-305
Cow position: chrX:24757951-24757646 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 239

Conread position: 6-305
Cow position: chrX:27325039-27324734 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 196

Conread position: 6-306
Cow position: chrX:42585322-42585030 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 92

Conread position: 6-312
Cow position: chrX:32743285-32743592 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 133

Conread position: 6-313
Cow position: chrX:5423320-5423007 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 255

Conread position: 6-316
Cow position: chrX:5406804-5407117 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 56

Conread position: 6-327
Cow position: chrX:11314031-11313711 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 48

Conread position: 6-351
Cow position: chrX:35258981-35258638 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 41

Conread position: 6-354
Cow position: chrX:47588448-47588809 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 109

Conread position: 6-382
Cow position: chrX:46722994-46722612 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 243

Conread position: 6-397
Cow position: chrX:11073444-11073052 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 6-399
Cow position: chrX:34565044-34565424 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 53

Conread position: 6-404
Cow position: chrX:25816149-25815758 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 113

Conread position: 6-427
Cow position: chrX:25035640-25035213 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 257

Conread position: 6-440
Cow position: chrX:41733437-41733018 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 276
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 36

Conread position: 6-503
Cow position: chrX:24366082-24365593 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 32

Conread position: 6-513
Cow position: chrX:37489478-37489967 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 19

Conread position: 7-254
Cow position: chrX:42590010-42589763 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 82

Conread position: 7-257
Cow position: chrX:42339188-42338946 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 7-266
Cow position: chrX:8591287-8591557 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 259

Conread position: 7-279
Cow position: chrX:23497915-23497646 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 48

Conread position: 7-321
Cow position: chrX:2559213-2558897 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 8

Conread position: 7-332
Cow position: chrX:678820-678481 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 152

Conread position: 7-364
Cow position: chrX:15037995-15037637 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 233
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 253

Conread position: 7-400
Cow position: chrX:44396762-44397151 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 8-210
Cow position: chrX:40515649-40515852 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 160, 51

Conread position: 8-252
Cow position: chrX:28847130-28846888 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 8-300
Cow position: chrX:39520706-39520409 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 252

Conread position: 8-392
Cow position: chrX:37232158-37232541 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 246

Conread position: 8-415
Cow position: chrX:13648035-13647628 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 107

Conread position: 8-507
Cow position: chrX:40826998-40826516 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 92

Conread position: 9-135
Cow position: chrX:616656-616530 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 117

Conread position: 9-208
Cow position: chrX:42855158-42855365 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 9-217
Cow position: chrX:35937322-35937121 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 24

Conread position: 9-236
Cow position: chrX:25946087-25945854 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 9-297
Cow position: chrX:10306420-10306714 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 48, 216

Conread position: 9-297
Cow position: chrX:27442805-27442518 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 48, 74

Conread position: 9-308
Cow position: chrX:15139795-15139497 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 9-308
Cow position: chrX:34270163-34270452 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 35

Conread position: 9-343
Cow position: chrX:42507897-42507563 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 199

Conread position: 9-349
Cow position: chrX:15485878-15485543 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 239

Conread position: 9-349
Cow position: chrX:29048779-29049109 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 212
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 160, 45

Conread position: 9-351
Cow position: chrX:11844491-11844148 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 50

Conread position: 9-351
Cow position: chrX:20709822-20710166 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 9-351
Cow position: chrX:44054552-44054895 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 9-364
Cow position: chrX:34441700-34441347 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 69

Conread position: 9-384
Cow position: chrX:7277677-7278037 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 139, 29

Conread position: 9-384
Cow position: chrX:8925453-8925824 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 119

Conread position: 9-393
Cow position: chrX:42171549-42171162 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 255

Conread position: 9-397
Cow position: chrX:38963859-38964247 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 47

Conread position: 9-398
Cow position: chrX:7178659-7179034 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 73

Conread position: 9-398
Cow position: chrX:27446438-27446826 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 245

Conread position: 9-398
Cow position: chrX:28866242-28865866 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 39

Conread position: 9-399
Cow position: chrX:12437489-12437131 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 9-403
Cow position: chrX:13868444-13868848 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 287

Conread position: 9-404
Cow position: chrX:34502670-34503066 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 47

Conread position: 9-415
Cow position: chrX:5118735-5118340 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 82

Conread position: 9-427
Cow position: chrX:38218465-38218885 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 57

Conread position: 9-498
Cow position: chrX:7351049-7351525 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 80

Conread position: 9-515
Cow position: chrX:878621-878111 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 74

Conread position: 10-154
Cow position: chrX:29193757-29193903 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 94

Conread position: 10-249
Cow position: chrX:35041970-35042216 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 10-399
Cow position: chrX:41673853-41674244 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 10-412
Cow position: chrX:17888654-17888271 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 11-249
Cow position: chrX:16790084-16789861 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 11-266
Cow position: chrX:9572275-9572535 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 250

Conread position: 11-266
Cow position: chrX:9976188-9976448 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 250

Conread position: 11-435
Cow position: chrX:33639724-33640153 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 12-170
Cow position: chrX:45787407-45787563 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 129

Conread position: 12-193
Cow position: chrX:48536913-48536727 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 56

Conread position: 12-210
Cow position: chrX:26883381-26883182 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 174

Conread position: 12-257
Cow position: chrX:38840641-38840888 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 106

Conread position: 12-264
Cow position: chrX:44850923-44850665 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 202

Conread position: 12-318
Cow position: chrX:37836339-37836646 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 235

Conread position: 12-354
Cow position: chrX:20887891-20887545 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 87

Conread position: 12-357
Cow position: chrX:24259824-24259480 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 240, 5

Conread position: 12-365
Cow position: chrX:28111260-28111616 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 5

Conread position: 12-398
Cow position: chrX:6278753-6278358 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 361

Conread position: 12-503
Cow position: chrX:27432166-27431695 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 244

Conread position: 13-181
Cow position: chrX:46990031-46989867 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 5, 119

Conread position: 13-227
Cow position: chrX:27590286-27590065 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 13-236
Cow position: chrX:28769869-28769636 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 13-263
Cow position: chrX:13323247-13322992 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 131

Conread position: 13-266
Cow position: chrX:45425071-45424813 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 247

Conread position: 13-311
Cow position: chrX:40788956-40789265 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 167

Conread position: 13-321
Cow position: chrX:22856786-22857105 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 13-487
Cow position: chrX:9416940-9416445 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 280

Conread position: 13-504
Cow position: chrX:21593037-21593521 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 244

Conread position: 13-524
Cow position: chrX:5872067-5872584 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 214

Conread position: 14-251
Cow position: chrX:42459935-42460180 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 14-275
Cow position: chrX:12001392-12001126 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 36, 246

Conread position: 14-361
Cow position: chrX:44737236-44736897 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 103, 181

Conread position: 15-230
Cow position: chrX:6869807-6869585 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 15-259
Cow position: chrX:42588915-42588666 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 15-414
Cow position: chrX:11655842-11656239 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 237

Conread position: 15-414
Cow position: chrX:42235780-42235367 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 15-513
Cow position: chrX:40648419-40648911 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 320
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 102

Conread position: 15-525
Cow position: chrX:20677121-20677617 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 351
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 42, 24

Conread position: 16-170
Cow position: chrX:31058905-31059058 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 16-174
Cow position: chrX:29049727-29049880 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 16-347
Cow position: chrX:19930414-19930737 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 11

Conread position: 16-365
Cow position: chrX:2300692-2301031 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 11

Conread position: 16-397
Cow position: chrX:9635424-9635052 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 166

Conread position: 16-398
Cow position: chrX:45113385-45113761 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 16-503
Cow position: chrX:13382081-13382571 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 305

Conread position: 17-131
Cow position: chrX:7710933-7710819 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-145
Cow position: chrX:919533-919402 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 21

Conread position: 17-160
Cow position: chrX:33538706-33538849 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 82

Conread position: 17-168
Cow position: chrX:20167962-20168117 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 17-170
Cow position: chrX:30729648-30729488 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 17-170
Cow position: chrX:36154814-36154660 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 89

Conread position: 17-170
Cow position: chrX:37364505-37364653 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 17-181
Cow position: chrX:6607179-6607346 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 110, 38

Conread position: 17-208
Cow position: chrX:10107217-10107023 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 58

Conread position: 17-223
Cow position: chrX:40279579-40279786 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 122

Conread position: 17-242
Cow position: chrX:35632996-35632773 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 160

Conread position: 17-252
Cow position: chrX:6694672-6694435 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 165, 97

Conread position: 17-264
Cow position: chrX:11981889-11982146 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 103, 132

Conread position: 17-276
Cow position: chrX:25281710-25281457 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 160

Conread position: 17-292
Cow position: chrX:30833080-30832818 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 17-298
Cow position: chrX:8558705-8558421 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 183

Conread position: 17-298
Cow position: chrX:33631936-33632205 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 10

Conread position: 17-299
Cow position: chrX:3396001-3395721 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 7

Conread position: 17-332
Cow position: chrX:13785611-13785286 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 17-351
Cow position: chrX:21663067-21663387 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 54

Conread position: 17-351
Cow position: chrX:48652969-48652628 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 211

Conread position: 17-352
Cow position: chrX:43567697-43568013 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 92

Conread position: 17-359
Cow position: chrX:45458790-45459141 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 15

Conread position: 17-365
Cow position: chrX:27176562-27176206 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 222

Conread position: 17-366
Cow position: chrX:17631044-17630693 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 167

Conread position: 17-384
Cow position: chrX:1514646-1514293 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 111

Conread position: 17-394
Cow position: chrX:48236568-48236953 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 244

Conread position: 18-204
Cow position: chrX:5808951-5809143 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 18-268
Cow position: chrX:35284376-35284631 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 18-275
Cow position: chrX:47042232-47041970 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 58

Conread position: 18-286
Cow position: chrX:47232596-47232859 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 116

Conread position: 18-316
Cow position: chrX:22521340-22521037 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 242

Conread position: 18-321
Cow position: chrX:39938758-39938460 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 18-364
Cow position: chrX:21626193-21625842 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 188

Conread position: 18-398
Cow position: chrX:28878403-28878034 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 18-398
Cow position: chrX:39558591-39558210 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 18-399
Cow position: chrX:46701060-46700708 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 99

Conread position: 19-157
Cow position: chrX:33519377-33519520 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 19-170
Cow position: chrX:25618152-25617996 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 19-170
Cow position: chrX:42530691-42530543 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 59

Conread position: 19-170
Cow position: chrX:44908082-44908231 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 107

Conread position: 19-170
Cow position: chrX:47243519-47243362 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 19-172
Cow position: chrX:11448308-11448153 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 19

Conread position: 19-173
Cow position: chrX:9538318-9538477 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 19-198
Cow position: chrX:40365032-40364849 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 58

Conread position: 19-208
Cow position: chrX:13058340-13058535 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 178

Conread position: 19-216
Cow position: chrX:9953901-9954104 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 32, 0

Conread position: 19-220
Cow position: chrX:2206784-2206588 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 120

Conread position: 19-229
Cow position: chrX:7425224-7425440 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 178

Conread position: 19-229
Cow position: chrX:43049102-43049320 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 19-230
Cow position: chrX:46984742-46984525 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 132

Conread position: 19-238
Cow position: chrX:25411600-25411821 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 86, 37

Conread position: 19-249
Cow position: chrX:10373067-10373306 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 183

Conread position: 19-249
Cow position: chrX:31745287-31745071 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 151

Conread position: 19-249
Cow position: chrX:40540382-40540150 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 39

Conread position: 19-249
Cow position: chrX:41403735-41403970 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 35, 14

Conread position: 19-249
Cow position: chrX:41410283-41410518 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 35, 14

Conread position: 19-254
Cow position: chrX:8517636-8517865 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 64

Conread position: 19-257
Cow position: chrX:44053018-44053257 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 19-263
Cow position: chrX:8682170-8681921 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 84

Conread position: 19-263
Cow position: chrX:33827262-33827011 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 19-266
Cow position: chrX:11691265-11691514 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 196

Conread position: 19-267
Cow position: chrX:29032177-29032419 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 175, 37

Conread position: 19-300
Cow position: chrX:11673602-11673870 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 61

Conread position: 19-316
Cow position: chrX:23970149-23970438 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 100

Conread position: 19-328
Cow position: chrX:26876121-26875811 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 51

Conread position: 19-331
Cow position: chrX:9855060-9855369 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 200

Conread position: 19-339
Cow position: chrX:1105044-1104719 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 241

Conread position: 19-339
Cow position: chrX:46044804-46045126 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 115

Conread position: 19-341
Cow position: chrX:16416268-16416592 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 48

Conread position: 19-349
Cow position: chrX:23414608-23414277 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 80, 51

Conread position: 19-351
Cow position: chrX:38935041-38935372 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 177

Conread position: 19-351
Cow position: chrX:39071457-39071787 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 77

Conread position: 19-354
Cow position: chrX:21004444-21004780 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 39

Conread position: 19-354
Cow position: chrX:24132391-24132055 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 52

Conread position: 19-354
Cow position: chrX:40692978-40692655 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 77

Conread position: 19-355
Cow position: chrX:42499269-42498951 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 37, 182

Conread position: 19-358
Cow position: chrX:6203315-6203641 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 158

Conread position: 19-360
Cow position: chrX:34543547-34543886 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 19-363
Cow position: chrX:11455292-11454944 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 151, 44

Conread position: 19-366
Cow position: chrX:15305526-15305188 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 13

Conread position: 19-366
Cow position: chrX:16284187-16283835 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 227

Conread position: 19-366
Cow position: chrX:26625917-26625563 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 186

Conread position: 19-370
Cow position: chrX:2029150-2029496 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 104, 159

Conread position: 19-393
Cow position: chrX:22624241-22624611 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 68

Conread position: 19-393
Cow position: chrX:47249028-47248643 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 205

Conread position: 19-395
Cow position: chrX:44961507-44961888 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 19-397
Cow position: chrX:37119359-37119731 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 93

Conread position: 19-397
Cow position: chrX:38642020-38642388 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 37

Conread position: 19-398
Cow position: chrX:4044090-4043727 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 19-399
Cow position: chrX:6563272-6563660 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 66

Conread position: 19-399
Cow position: chrX:39126100-39126467 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 23

Conread position: 19-399
Cow position: chrX:42011040-42011422 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 160

Conread position: 19-400
Cow position: chrX:21672311-21672702 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 244

Conread position: 19-406
Cow position: chrX:33855473-33855074 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 347

Conread position: 19-419
Cow position: chrX:27514629-27515025 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 19-420
Cow position: chrX:33493535-33493939 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 164

Conread position: 19-421
Cow position: chrX:41884658-41884247 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 19-437
Cow position: chrX:619248-618830 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 330

Conread position: 19-503
Cow position: chrX:27394254-27393789 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 121

Conread position: 19-515
Cow position: chrX:23514258-23513771 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 57

Conread position: 20-170
Cow position: chrX:8492997-8492842 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 20-255
Cow position: chrX:11674825-11675060 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 185

Conread position: 20-263
Cow position: chrX:39700988-39701228 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 159

Conread position: 20-351
Cow position: chrX:9360644-9360980 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 83

Conread position: 20-384
Cow position: chrX:11939163-11938807 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 44

Conread position: 20-398
Cow position: chrX:41526760-41526389 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 20-398
Cow position: chrX:45598843-45598465 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 149

Conread position: 21-230
Cow position: chrX:24234718-24234503 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 131

Conread position: 21-366
Cow position: chrX:37910215-37910553 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 22-173
Cow position: chrX:6643023-6643172 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 34

Conread position: 22-252
Cow position: chrX:24200956-24201180 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 169, 10

Conread position: 22-351
Cow position: chrX:13405553-13405219 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 217
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 222

Conread position: 22-358
Cow position: chrX:4865014-4865333 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 106

Conread position: 22-405
Cow position: chrX:15814860-15815232 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 23-170
Cow position: chrX:25301989-25301839 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 73

Conread position: 23-170
Cow position: chrX:27323103-27322956 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-173
Cow position: chrX:9837902-9838057 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 23-227
Cow position: chrX:40116189-40116390 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 23-227
Cow position: chrX:44731358-44731567 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 23-236
Cow position: chrX:28856741-28856952 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 94

Conread position: 23-264
Cow position: chrX:40475101-40474860 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 126

Conread position: 23-267
Cow position: chrX:42282194-42282440 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 8, 113

Conread position: 23-300
Cow position: chrX:32128216-32127950 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 111, 88

Conread position: 23-318
Cow position: chrX:41167200-41166902 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 23-334
Cow position: chrX:11589828-11589512 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 97

Conread position: 23-350
Cow position: chrX:34663081-34662754 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 93

Conread position: 23-366
Cow position: chrX:17964758-17964414 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 250

Conread position: 23-369
Cow position: chrX:7508903-7509250 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 23-398
Cow position: chrX:42492746-42492384 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 23-399
Cow position: chrX:30421175-30420811 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 200

Conread position: 23-399
Cow position: chrX:46532745-46532354 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 164

Conread position: 23-404
Cow position: chrX:17794749-17795127 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 23-406
Cow position: chrX:4768514-4768883 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 86

Conread position: 23-410
Cow position: chrX:20697844-20697457 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 205

Conread position: 23-423
Cow position: chrX:9252414-9251999 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 23-488
Cow position: chrX:6690484-6690030 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 99

Conread position: 23-543
Cow position: chrX:27772192-27771669 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 34

Conread position: 24-170
Cow position: chrX:25205483-25205634 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 24-365
Cow position: chrX:3154481-3154136 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 197

Conread position: 24-398
Cow position: chrX:22074565-22074940 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 24-398
Cow position: chrX:45110417-45110796 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 140

Conread position: 25-185
Cow position: chrX:19228293-19228135 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 79

Conread position: 25-204
Cow position: chrX:37067099-37067284 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 162

Conread position: 25-210
Cow position: chrX:6639890-6640082 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 25-234
Cow position: chrX:4942985-4942780 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 86

Conread position: 25-255
Cow position: chrX:47757163-47756931 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 180

Conread position: 25-259
Cow position: chrX:28579987-28580229 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 25-261
Cow position: chrX:36840639-36840873 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 31

Conread position: 25-262
Cow position: chrX:2383255-2383491 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 230

Conread position: 25-263
Cow position: chrX:7513282-7513516 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 39

Conread position: 25-267
Cow position: chrX:25571230-25570988 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 142

Conread position: 25-269
Cow position: chrX:10302102-10302347 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 68

Conread position: 25-351
Cow position: chrX:36197733-36198069 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 217

Conread position: 25-355
Cow position: chrX:27680169-27680495 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 31

Conread position: 25-356
Cow position: chrX:19878834-19879136 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 247, 31

Conread position: 25-432
Cow position: chrX:32623349-32623745 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 25-432
Cow position: chrX:38549214-38549621 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 152

Conread position: 26-266
Cow position: chrX:29859210-29858966 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 233

Conread position: 26-316
Cow position: chrX:13057336-13057631 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 179

Conread position: 26-351
Cow position: chrX:17231501-17231828 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 99

Conread position: 26-398
Cow position: chrX:9201314-9201688 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 238

Conread position: 26-398
Cow position: chrX:36975716-36976091 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 190

Conread position: 27-170
Cow position: chrX:46372975-46372829 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 28

Conread position: 27-225
Cow position: chrX:877255-877061 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 140, 121

Conread position: 27-230
Cow position: chrX:866089-866295 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 78

Conread position: 27-259
Cow position: chrX:11561922-11562158 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 29, 37

Conread position: 27-276
Cow position: chrX:43075766-43076005 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 148

Conread position: 27-305
Cow position: chrX:26751849-26751563 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 236

Conread position: 27-322
Cow position: chrX:41198872-41199172 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 113

Conread position: 27-396
Cow position: chrX:47054759-47054387 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 6

Conread position: 27-404
Cow position: chrX:30963104-30962732 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 98

Conread position: 27-419
Cow position: chrX:45174612-45175011 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 164

Conread position: 27-498
Cow position: chrX:48010362-48010849 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 358

Conread position: 28-170
Cow position: chrX:10462406-10462547 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 28-249
Cow position: chrX:18456161-18456392 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 28-269
Cow position: chrX:2648581-2648343 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 89, 0

Conread position: 28-299
Cow position: chrX:15996923-15997204 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 237

Conread position: 28-322
Cow position: chrX:14900952-14900669 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 28-366
Cow position: chrX:32431396-32431732 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 38

Conread position: 28-409
Cow position: chrX:22821816-22822199 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 149

Conread position: 28-410
Cow position: chrX:5900226-5900612 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 106

Conread position: 28-504
Cow position: chrX:36283114-36283570 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 225

Conread position: 29-249
Cow position: chrX:37048811-37048586 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 149

Conread position: 29-266
Cow position: chrX:12974354-12974114 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 194

Conread position: 29-267
Cow position: chrX:1978275-1978519 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 66

Conread position: 29-275
Cow position: chrX:44870860-44870620 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 82

Conread position: 29-320
Cow position: chrX:42500264-42500560 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 25

Conread position: 29-348
Cow position: chrX:12405599-12405291 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 141, 27

Conread position: 29-350
Cow position: chrX:3146966-3147294 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 138

Conread position: 29-364
Cow position: chrX:3130351-3130679 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 119

Conread position: 29-397
Cow position: chrX:35542661-35543026 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 277

Conread position: 29-398
Cow position: chrX:17662827-17662458 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 242

Conread position: 29-398
Cow position: chrX:42247414-42247042 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 111

Conread position: 29-410
Cow position: chrX:42381330-42380962 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 113

Conread position: 29-413
Cow position: chrX:7721754-7722143 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 173

Conread position: 30-170
Cow position: chrX:25163589-25163731 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 30-201
Cow position: chrX:18812029-18812196 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 161, 33

Conread position: 30-267
Cow position: chrX:1728646-1728417 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 219, 26

Conread position: 30-275
Cow position: chrX:11746613-11746866 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 236

Conread position: 30-296
Cow position: chrX:21664952-21664689 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 40

Conread position: 30-385
Cow position: chrX:16541905-16541531 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 96, 26

Conread position: 30-420
Cow position: chrX:30921956-30922331 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 59

Conread position: 32-224
Cow position: chrX:34385102-34385300 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 33-230
Cow position: chrX:4482736-4482940 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 67

Conread position: 33-236
Cow position: chrX:36922421-36922622 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 87

Conread position: 33-243
Cow position: chrX:48684449-48684239 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 23, 92

Conread position: 33-308
Cow position: chrX:35681119-35681392 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 33-321
Cow position: chrX:25232364-25232656 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 33-358
Cow position: chrX:11856203-11856530 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 33-520
Cow position: chrX:27994483-27993982 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 312
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 400

Conread position: 34-148
Cow position: chrX:1465962-1466076 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 101

Conread position: 34-250
Cow position: chrX:26940716-26940511 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 12

Conread position: 34-266
Cow position: chrX:34995098-34995333 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 188

Conread position: 34-279
Cow position: chrX:4750523-4750282 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 29

Conread position: 34-279
Cow position: chrX:29509669-29509418 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 242

Conread position: 34-343
Cow position: chrX:13265845-13265542 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 34-399
Cow position: chrX:28013665-28013301 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 98

Conread position: 35-365
Cow position: chrX:630532-630203 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 50

Conread position: 35-411
Cow position: chrX:13191768-13191405 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 183

Conread position: 36-305
Cow position: chrX:10123569-10123306 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 8

Conread position: 36-423
Cow position: chrX:11633455-11633846 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 370

Conread position: 37-384
Cow position: chrX:37574634-37574966 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 38-412
Cow position: chrX:13177686-13177322 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 39-249
Cow position: chrX:10437885-10437677 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 17, 165

Conread position: 39-249
Cow position: chrX:19019332-19019114 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 17, 102

Conread position: 39-252
Cow position: chrX:280914-281117 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 152, 17

Conread position: 39-255
Cow position: chrX:13245371-13245592 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 58

Conread position: 39-257
Cow position: chrX:16689272-16689496 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 39-261
Cow position: chrX:24450395-24450168 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 221

Conread position: 39-269
Cow position: chrX:30484425-30484189 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 42

Conread position: 39-313
Cow position: chrX:34135360-34135081 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 22

Conread position: 39-349
Cow position: chrX:6265806-6265508 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 81

Conread position: 39-351
Cow position: chrX:18651262-18650948 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 39

Conread position: 39-351
Cow position: chrX:41271879-41271563 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 52

Conread position: 39-353
Cow position: chrX:6488366-6488671 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 39-365
Cow position: chrX:9041449-9041137 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 87

Conread position: 39-398
Cow position: chrX:29602053-29601688 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 39-399
Cow position: chrX:1503119-1503468 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 39-402
Cow position: chrX:10959623-10959251 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 39-410
Cow position: chrX:23091661-23092023 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 138

Conread position: 40-250
Cow position: chrX:20792037-20791826 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 16, 161

Conread position: 40-262
Cow position: chrX:2701031-2700812 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 141

Conread position: 40-351
Cow position: chrX:21642697-21642389 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 42

Conread position: 40-396
Cow position: chrX:36355907-36356243 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 335, 16

Conread position: 40-398
Cow position: chrX:12980050-12979694 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 178

Conread position: 41-204
Cow position: chrX:47487282-47487442 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 80

Conread position: 42-203
Cow position: chrX:25036918-25036750 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 42-326
Cow position: chrX:2186041-2186322 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 102

Conread position: 42-396
Cow position: chrX:29120841-29121185 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 14

Conread position: 42-397
Cow position: chrX:28929625-28929976 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 202, 74

Conread position: 42-415
Cow position: chrX:37781330-37780953 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 14

Conread position: 43-266
Cow position: chrX:11410243-11410025 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 58

Conread position: 43-285
Cow position: chrX:45015369-45015603 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 68

Conread position: 43-300
Cow position: chrX:40567383-40567640 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 170

Conread position: 43-302
Cow position: chrX:41560455-41560213 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 82

Conread position: 43-315
Cow position: chrX:8070916-8070642 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 21

Conread position: 43-351
Cow position: chrX:25568615-25568297 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 249

Conread position: 44-264
Cow position: chrX:20787604-20787826 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 41

Conread position: 45-173
Cow position: chrX:20787394-20787264 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 6, 82

Conread position: 45-245
Cow position: chrX:46315593-46315390 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 82, 11

Conread position: 45-392
Cow position: chrX:7161858-7162190 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 211, 37

Conread position: 46-230
Cow position: chrX:2004173-2003990 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 77

Conread position: 47-323
Cow position: chrX:9425953-9425678 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 127

Conread position: 47-415
Cow position: chrX:8869623-8869246 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 48-169
Cow position: chrX:23017792-23017917 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 48-351
Cow position: chrX:3579735-3580037 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 8

Conread position: 49-284
Cow position: chrX:20752050-20752280 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 118, 71

Conread position: 49-414
Cow position: chrX:27174785-27175152 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 270

Conread position: 50-160
Cow position: chrX:45976674-45976779 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 50-219
Cow position: chrX:16324172-16324003 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 94

Conread position: 50-228
Cow position: chrX:45658281-45658109 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 103

Conread position: 50-230
Cow position: chrX:46430066-46429888 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 169, 0

Conread position: 50-238
Cow position: chrX:8917645-8917823 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 160, 88

Conread position: 50-241
Cow position: chrX:44063925-44063737 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 138

Conread position: 50-331
Cow position: chrX:6234657-6234376 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 74

Conread position: 50-344
Cow position: chrX:15575327-15575625 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 236

Conread position: 50-344
Cow position: chrX:29542427-29542131 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 50-349
Cow position: chrX:15576336-15576638 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 236

Conread position: 50-364
Cow position: chrX:47046728-47046407 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 207

Conread position: 50-398
Cow position: chrX:34411631-34411986 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 115

Conread position: 50-398
Cow position: chrX:40035654-40035300 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 50-398
Cow position: chrX:45845887-45846241 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 250

Conread position: 50-503
Cow position: chrX:38852988-38853440 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 166

Conread position: 51-249
Cow position: chrX:26285772-26285970 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 116, 139

Conread position: 51-255
Cow position: chrX:18195733-18195931 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 68

Conread position: 51-327
Cow position: chrX:7362058-7361796 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 123

Conread position: 51-340
Cow position: chrX:29876274-29875995 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 73, 91

Conread position: 51-397
Cow position: chrX:4826035-4825697 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 115

Conread position: 51-415
Cow position: chrX:32420011-32420369 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 183

Conread position: 52-311
Cow position: chrX:2147128-2147397 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 254

Conread position: 52-351
Cow position: chrX:841952-842250 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 78

Conread position: 52-351
Cow position: chrX:16996300-16996585 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 78

Conread position: 52-351
Cow position: chrX:46587611-46587915 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 91

Conread position: 53-216
Cow position: chrX:29770384-29770215 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 55-202
Cow position: chrX:16933267-16933419 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 101

Conread position: 55-284
Cow position: chrX:17908487-17908262 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 65, 93

Conread position: 55-360
Cow position: chrX:29545083-29544775 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 55-365
Cow position: chrX:31340501-31340817 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 72, 193

Conread position: 56-252
Cow position: chrX:18216074-18216280 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 56-269
Cow position: chrX:28836103-28835895 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 56-351
Cow position: chrX:1176185-1175890 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 180

Conread position: 56-366
Cow position: chrX:23785452-23785754 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 14

Conread position: 57-383
Cow position: chrX:1499468-1499791 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 58-358
Cow position: chrX:43780053-43779747 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 210

Conread position: 58-402
Cow position: chrX:10252381-10252056 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 8

Conread position: 58-415
Cow position: chrX:4515467-4515846 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 220

Conread position: 59-235
Cow position: chrX:41764439-41764623 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 59

Conread position: 59-256
Cow position: chrX:4091448-4091646 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 109, 73

Conread position: 59-351
Cow position: chrX:47303079-47302784 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 68, 140

Conread position: 59-382
Cow position: chrX:45148975-45149290 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 190

Conread position: 60-351
Cow position: chrX:47301102-47300810 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 65, 137

Conread position: 61-364
Cow position: chrX:14955962-14955662 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 26

Conread position: 63-385
Cow position: chrX:47484467-47484138 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 319

Conread position: 65-262
Cow position: chrX:45874805-45875004 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 65-515
Cow position: chrX:31311832-31312298 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 151

Conread position: 66-203
Cow position: chrX:46672798-46672659 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 66-220
Cow position: chrX:2764677-2764828 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 54

Conread position: 66-274
Cow position: chrX:8991695-8991901 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 103, 74

Conread position: 66-319
Cow position: chrX:36961443-36961702 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 197

Conread position: 66-331
Cow position: chrX:37540932-37541191 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 105, 58

Conread position: 66-335
Cow position: chrX:10394288-10394027 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 102, 37

Conread position: 66-408
Cow position: chrX:33000711-33001057 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 87

Conread position: 67-437
Cow position: chrX:43730406-43730046 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 68-358
Cow position: chrX:45993028-45993330 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 103

Conread position: 69-259
Cow position: chrX:31256678-31256867 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 70-230
Cow position: chrX:24149451-24149613 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 70-267
Cow position: chrX:1505524-1505720 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 22

Conread position: 70-351
Cow position: chrX:40809498-40809786 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 70-360
Cow position: chrX:3489073-3488789 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 181, 49

Conread position: 70-398
Cow position: chrX:44657153-44656817 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 221

Conread position: 71-351
Cow position: chrX:7863758-7863488 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 137

Conread position: 71-378
Cow position: chrX:47362799-47362503 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 119

Conread position: 72-344
Cow position: chrX:48035241-48035511 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 109

Conread position: 73-252
Cow position: chrX:25966855-25967031 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 47

Conread position: 73-404
Cow position: chrX:35383205-35382891 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 133

Conread position: 74-437
Cow position: chrX:36067835-36068195 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 53

Conread position: 76-285
Cow position: chrX:45759215-45759414 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 76-517
Cow position: chrX:32820847-32821278 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 77-395
Cow position: chrX:7336645-7336978 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 157

Conread position: 78-506
Cow position: chrX:12007554-12007126 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 274
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 59

Conread position: 79-255
Cow position: chrX:30005089-30005263 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 79-322
Cow position: chrX:48044379-48044135 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 145

Conread position: 80-262
Cow position: chrX:16514443-16514260 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 122

Conread position: 80-279
Cow position: chrX:9770863-9770655 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 170

Conread position: 80-349
Cow position: chrX:24288111-24287842 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 102

Conread position: 80-360
Cow position: chrX:36060973-36061262 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 210

Conread position: 80-425
Cow position: chrX:31252239-31252572 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 81-358
Cow position: chrX:47186498-47186224 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 86, 133

Conread position: 82-364
Cow position: chrX:14018975-14019258 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 160

Conread position: 82-385
Cow position: chrX:47166061-47165760 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 21

Conread position: 83-258
Cow position: chrX:29563546-29563378 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 106

Conread position: 83-306
Cow position: chrX:22866756-22866533 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 159

Conread position: 83-348
Cow position: chrX:30221951-30222217 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 176

Conread position: 83-351
Cow position: chrX:40321686-40321956 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 174

Conread position: 83-354
Cow position: chrX:18485619-18485899 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 109

Conread position: 83-369
Cow position: chrX:23341143-23340859 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 132

Conread position: 83-382
Cow position: chrX:30134348-30134048 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 10

Conread position: 83-397
Cow position: chrX:169701-169407 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 85, 56

Conread position: 83-410
Cow position: chrX:4279290-4278965 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 108

Conread position: 83-414
Cow position: chrX:27145447-27145758 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 147

Conread position: 84-319
Cow position: chrX:46146735-46146500 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 56

Conread position: 84-397
Cow position: chrX:21986465-21986152 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 11

Conread position: 85-339
Cow position: chrX:22465782-22466037 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 166, 38

Conread position: 85-398
Cow position: chrX:35885903-35885587 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 149

Conread position: 85-513
Cow position: chrX:22387421-22387004 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 172

Conread position: 86-298
Cow position: chrX:37750426-37750214 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 86

Conread position: 86-349
Cow position: chrX:41417745-41418015 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 175

Conread position: 86-421
Cow position: chrX:46433310-46433653 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 181

Conread position: 87-398
Cow position: chrX:20168386-20168697 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 41

Conread position: 87-398
Cow position: chrX:34792482-34792173 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 61

Conread position: 87-423
Cow position: chrX:4398954-4399282 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 114

Conread position: 89-268
Cow position: chrX:23666953-23667135 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 92-216
Cow position: chrX:41271374-41271249 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 92-252
Cow position: chrX:14003811-14003646 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 92-370
Cow position: chrX:22921147-22921434 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 15

Conread position: 92-382
Cow position: chrX:44836828-44837098 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 155, 47

Conread position: 92-398
Cow position: chrX:8917226-8917533 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 35, 164

Conread position: 92-516
Cow position: chrX:6407382-6407787 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 48

Conread position: 92-517
Cow position: chrX:10128838-10129274 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 283
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 164

Conread position: 93-255
Cow position: chrX:48385529-48385360 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 93-317
Cow position: chrX:41992207-41991986 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 75, 21

Conread position: 93-364
Cow position: chrX:30263087-30263365 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 165

Conread position: 93-398
Cow position: chrX:37955672-37955987 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 147, 26

Conread position: 93-425
Cow position: chrX:14275901-14275576 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 94-312
Cow position: chrX:18417756-18417536 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 120

Conread position: 94-401
Cow position: chrX:25208011-25207714 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 144

Conread position: 95-317
Cow position: chrX:18515237-18515463 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 164

Conread position: 95-392
Cow position: chrX:27206636-27206934 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 35

Conread position: 98-249
Cow position: chrX:36723249-36723099 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 10

Conread position: 98-273
Cow position: chrX:31273088-31273262 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 27

Conread position: 103-276
Cow position: chrX:35969238-35969068 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 30

Conread position: 104-259
Cow position: chrX:33590573-33590731 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 104-275
Cow position: chrX:36354123-36353952 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 135

Conread position: 104-278
Cow position: chrX:36314449-36314275 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 122

Conread position: 104-315
Cow position: chrX:25193506-25193720 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 108

Conread position: 104-351
Cow position: chrX:16532052-16532289 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 125

Conread position: 104-414
Cow position: chrX:27227969-27228288 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 152

Conread position: 104-519
Cow position: chrX:23561723-23562119 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 229, 12

Conread position: 105-351
Cow position: chrX:48571146-48570895 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 18

Conread position: 105-410
Cow position: chrX:29680414-29680112 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 153

Conread position: 106-395
Cow position: chrX:20584166-20584465 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 107-348
Cow position: chrX:18426093-18425848 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 152

Conread position: 108-410
Cow position: chrX:27301720-27302030 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 6

Conread position: 110-224
Cow position: chrX:10380702-10380820 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 110-259
Cow position: chrX:29055971-29056116 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 110-264
Cow position: chrX:525554-525706 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 17

Conread position: 110-365
Cow position: chrX:39415518-39415263 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 99

Conread position: 110-398
Cow position: chrX:9365822-9365536 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 21

Conread position: 110-415
Cow position: chrX:870314-870024 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 23

Conread position: 111-398
Cow position: chrX:48014295-48014575 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 7

Conread position: 113-296
Cow position: chrX:38188223-38188043 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 81

Conread position: 113-514
Cow position: chrX:29723596-29723992 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 56, 128

Conread position: 114-250
Cow position: chrX:10366370-10366234 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 114-281
Cow position: chrX:23254354-23254175 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 114-334
Cow position: chrX:35822198-35822420 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 97

Conread position: 114-352
Cow position: chrX:42873249-42873476 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 8

Conread position: 114-354
Cow position: chrX:47280076-47279836 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 188, 126

Conread position: 114-399
Cow position: chrX:38066594-38066312 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 135, 74

Conread position: 114-406
Cow position: chrX:34313889-34314170 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 114-412
Cow position: chrX:5919352-5919651 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 137, 82

Conread position: 114-500
Cow position: chrX:11085201-11084813 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 119

Conread position: 115-408
Cow position: chrX:11614556-11614844 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 147

Conread position: 118-408
Cow position: chrX:41870933-41871218 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 76

Conread position: 118-413
Cow position: chrX:19273863-19273552 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 120-375
Cow position: chrX:7710681-7710423 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 140

Conread position: 120-400
Cow position: chrX:37986095-37986367 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 75

Conread position: 120-415
Cow position: chrX:34222576-34222871 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 11

Conread position: 121-238
Cow position: chrX:27269833-27269945 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 121-385
Cow position: chrX:36393484-36393216 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 168

Conread position: 121-398
Cow position: chrX:45976783-45977066 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 122-359
Cow position: chrX:27685111-27685350 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 122-366
Cow position: chrX:21566266-21566515 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 144

Conread position: 122-393
Cow position: chrX:22454228-22453964 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 29

Conread position: 123-323
Cow position: chrX:32215062-32215267 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 98

Conread position: 123-398
Cow position: chrX:41027022-41027299 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 49

Conread position: 123-421
Cow position: chrX:18204598-18204298 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 122

Conread position: 123-503
Cow position: chrX:616397-616010 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 169

Conread position: 124-322
Cow position: chrX:27450133-27449934 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 108

Conread position: 126-393
Cow position: chrX:48262474-48262740 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 119

Conread position: 126-397
Cow position: chrX:40685463-40685189 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 127-410
Cow position: chrX:34505178-34504896 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 76

Conread position: 128-351
Cow position: chrX:45875261-45875485 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 136

Conread position: 128-398
Cow position: chrX:43115021-43115290 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 105

Conread position: 129-349
Cow position: chrX:26493766-26493542 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 66, 126

Conread position: 129-397
Cow position: chrX:38728608-38728873 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 126

Conread position: 129-401
Cow position: chrX:48044641-48044373 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 24

Conread position: 130-398
Cow position: chrX:34315396-34315661 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 46

Conread position: 131-346
Cow position: chrX:16055084-16055295 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 99

Conread position: 132-339
Cow position: chrX:19003174-19003374 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 0

Conread position: 134-351
Cow position: chrX:27946183-27945961 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 135-323
Cow position: chrX:9155131-9155326 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 135-351
Cow position: chrX:18111267-18111471 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 135-360
Cow position: chrX:44744940-44744716 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 145

Conread position: 135-497
Cow position: chrX:23562512-23562889 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 264, 85

Conread position: 136-385
Cow position: chrX:40320283-40320532 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 109

Conread position: 138-400
Cow position: chrX:26881688-26881423 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 140-360
Cow position: chrX:46546995-46546773 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 68

Conread position: 140-396
Cow position: chrX:5679684-5679434 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 84

Conread position: 142-365
Cow position: chrX:24331662-24331884 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 125

Conread position: 142-519
Cow position: chrX:46291023-46291384 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 130, 14

Conread position: 144-414
Cow position: chrX:42927933-42927670 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 145-322
Cow position: chrX:20790808-20790977 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 156, 109

Conread position: 145-384
Cow position: chrX:33539052-33539296 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 129

Conread position: 145-391
Cow position: chrX:29229896-29230132 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 97

Conread position: 145-517
Cow position: chrX:38654543-38654189 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 48

Conread position: 146-349
Cow position: chrX:40175055-40175256 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 156

Conread position: 147-343
Cow position: chrX:4992127-4991928 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 71

Conread position: 147-421
Cow position: chrX:29194123-29194393 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 230, 60

Conread position: 147-509
Cow position: chrX:17949601-17949257 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 26, 113

Conread position: 148-420
Cow position: chrX:45670117-45670384 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 25

Conread position: 149-298
Cow position: chrX:8326651-8326799 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 27

Conread position: 149-359
Cow position: chrX:9898188-9897978 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 134

Conread position: 150-535
Cow position: chrX:47657276-47657653 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 18, 46

Conread position: 151-249
Cow position: chrX:35848454-35848551 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 55

Conread position: 154-354
Cow position: chrX:31515065-31515270 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 65

Conread position: 154-356
Cow position: chrX:29937983-29938189 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 48

Conread position: 156-508
Cow position: chrX:16348672-16348321 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 162

Conread position: 157-384
Cow position: chrX:11851770-11851553 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 162, 94

Conread position: 157-405
Cow position: chrX:21327802-21328058 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 217

Conread position: 159-398
Cow position: chrX:10516157-10516393 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 38

Conread position: 160-364
Cow position: chrX:40283027-40283228 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 91

Conread position: 162-365
Cow position: chrX:29549644-29549443 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 161

Conread position: 162-412
Cow position: chrX:34837150-34836910 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 162-527
Cow position: chrX:12095870-12095519 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 79

Conread position: 163-398
Cow position: chrX:38208637-38208405 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 21

Conread position: 163-404
Cow position: chrX:38560462-38560705 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 75

Conread position: 164-406
Cow position: chrX:47345240-47345478 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 206, 84

Conread position: 166-415
Cow position: chrX:1466069-1466318 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 236

Conread position: 166-499
Cow position: chrX:33654933-33654618 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 78

Conread position: 167-347
Cow position: chrX:1572228-1572050 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 167-403
Cow position: chrX:918818-918571 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 178

Conread position: 167-418
Cow position: chrX:23113186-23113444 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 42

Conread position: 167-436
Cow position: chrX:29050156-29050426 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 154

Conread position: 167-499
Cow position: chrX:4296910-4296599 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 314, 76

Conread position: 168-398
Cow position: chrX:42855365-42855598 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 52

Conread position: 171-364
Cow position: chrX:11318054-11317861 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 185, 79

Conread position: 171-419
Cow position: chrX:35590844-35590592 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 172-398
Cow position: chrX:40680525-40680754 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 176-406
Cow position: chrX:5135607-5135374 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 216

Conread position: 177-366
Cow position: chrX:48071080-48071269 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 177-399
Cow position: chrX:18273139-18272918 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 69, 149

Conread position: 178-414
Cow position: chrX:36514974-36514739 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 223

Conread position: 178-475
Cow position: chrX:39220000-39220284 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 35

Conread position: 179-500
Cow position: chrX:22115396-22115088 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 81

Conread position: 179-500
Cow position: chrX:41271077-41270741 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 255

Conread position: 180-406
Cow position: chrX:4153113-4152885 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 224

Conread position: 181-415
Cow position: chrX:4746318-4746087 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 185, 72

Conread position: 184-398
Cow position: chrX:46429894-46429679 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 20, 15

Conread position: 188-351
Cow position: chrX:19965472-19965303 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 188-397
Cow position: chrX:22915106-22914903 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 192-365
Cow position: chrX:41111655-41111823 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 192-384
Cow position: chrX:12082391-12082198 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 71, 62

Conread position: 193-386
Cow position: chrX:2675022-2674831 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 132

Conread position: 195-351
Cow position: chrX:13146919-13147074 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 197-526
Cow position: chrX:20957187-20957487 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 284, 52

Conread position: 198-398
Cow position: chrX:27511367-27511568 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 61

Conread position: 201-396
Cow position: chrX:19469563-19469370 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 188, 0

Conread position: 201-498
Cow position: chrX:31627038-31626741 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 127

Conread position: 202-436
Cow position: chrX:32978133-32977908 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 204-421
Cow position: chrX:35985764-35985978 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 107

Conread position: 205-399
Cow position: chrX:25328659-25328474 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 183, 39

Conread position: 209-397
Cow position: chrX:19943286-19943097 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 129

Conread position: 209-408
Cow position: chrX:22393035-22392837 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 179

Conread position: 210-354
Cow position: chrX:44095209-44095356 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 63

Conread position: 213-405
Cow position: chrX:27306407-27306601 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 214-392
Cow position: chrX:2523722-2523548 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 214-527
Cow position: chrX:6599828-6599521 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 188

Conread position: 215-398
Cow position: chrX:11326143-11325958 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 153

Conread position: 216-398
Cow position: chrX:29553243-29553425 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 16

Conread position: 217-406
Cow position: chrX:19394511-19394704 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 218-398
Cow position: chrX:16984587-16984780 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 169

Conread position: 218-517
Cow position: chrX:40532084-40531784 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 155

Conread position: 220-384
Cow position: chrX:29585082-29585245 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 224-398
Cow position: chrX:28940212-28940385 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 122, 8

Conread position: 232-397
Cow position: chrX:4616035-4615872 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 18

Conread position: 233-421
Cow position: chrX:44926443-44926620 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 237-503
Cow position: chrX:25411886-25412148 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 130

Conread position: 242-398
Cow position: chrX:12972666-12972824 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 16

Conread position: 242-503
Cow position: chrX:23498692-23498434 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 158, 21

Conread position: 245-408
Cow position: chrX:16836299-16836139 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 252-398
Cow position: chrX:4466962-4467107 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 252-509
Cow position: chrX:32943081-32942843 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 238, 11

Conread position: 258-424
Cow position: chrX:2935957-2936124 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 263-399
Cow position: chrX:29501876-29501743 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 263-406
Cow position: chrX:32208817-32208677 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 263-415
Cow position: chrX:27668953-27668803 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 0

Conread position: 271-408
Cow position: chrX:29467765-29467630 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 276-497
Cow position: chrX:34508562-34508783 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 124

Conread position: 283-398
Cow position: chrX:32866900-32867015 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 288-513
Cow position: chrX:41939853-41940088 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 106

Conread position: 296-500
Cow position: chrX:46079123-46079314 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 194, 78

Show alignments to all cow chromosomes.