Cow genome map
| Conread name: | Ss1.1-Mixn-0039f23.5 | 
| Conread position: | 1-101 | 
| Cow position: | chr3:54746159-54746259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 98-262 | 
| Cow position: | chr3:54749296-54749457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 338-464 | 
| Cow position: | chr3:54750755-54750881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 463-604 | 
| Cow position: | chr3:54751516-54751656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 598-751 | 
| Cow position: | chr3:54753382-54753535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 744-902 | 
| Cow position: | chr3:54755804-54755963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 903-998 | 
| Cow position: | chr3:54756080-54756175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 996-1175 | 
| Cow position: | chr3:54757238-54757418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 123 | 
Show alignments to all cow chromosomes.
