Cow genome map

Conread name: Ss1.1-Mus1-POSM0100011_B06F.5

Conread position: 361-1168
Cow position: chr14:680242-681049 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 466
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 73

Conread position: 361-1177
Cow position: chr14:3128087-3127271 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 478
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 79, 53

Conread position: 369-929
Cow position: chr14:3080231-3079671 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 339
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 65

Conread position: 372-1168
Cow position: chr14:3080648-3079852 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 461
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 32

Conread position: 375-1047
Cow position: chr14:680592-681264 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 394
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 112, 117

Conread position: 423-1136
Cow position: chr14:25876653-25877366 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 423
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 153, 16

Conread position: 431-1021
Cow position: chr14:433815-434405 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 354
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 131, 123

Conread position: 439-892
Cow position: chr14:25860205-25860658 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 272
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 192, 185

Conread position: 439-1021
Cow position: chr14:25836648-25837230 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 339
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 182, 177

Conread position: 439-1050
Cow position: chr14:25877256-25877867 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 370
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 192, 185

Conread position: 439-1132
Cow position: chr14:25859701-25860394 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 397
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 209, 218

Conread position: 439-1150
Cow position: chr14:25836396-25837107 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 418
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 30

Conread position: 439-1183
Cow position: chr14:25876836-25877583 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 444
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 123, 117

Conread position: 440-1058
Cow position: chr14:25836565-25837183 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 361
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 208, 217

Conread position: 440-1147
Cow position: chr14:25877089-25877796 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 414
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 58

Conread position: 445-1132
Cow position: chr14:25876338-25877025 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 408
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 119, 131

Conread position: 445-1132
Cow position: chr14:25895637-25896324 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 394
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 187, 181

Conread position: 447-964
Cow position: chr14:680748-681265 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 302
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 451-1108
Cow position: chr14:3080317-3079660 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 391
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 119, 106

Conread position: 451-1187
Cow position: chr14:680500-681236 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 152

Conread position: 452-1137
Cow position: chr14:3128164-3127479 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 401
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 104, 119

Conread position: 474-1138
Cow position: chr14:25783560-25784224 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 393
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 191, 197

Conread position: 482-1156
Cow position: chr14:25795462-25794788 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 390
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 166, 155

Conread position: 487-1168
Cow position: chr14:447566-448247 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 411
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 75, 70

Conread position: 490-1103
Cow position: chr14:3156130-3156734 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 363
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 182, 176

Conread position: 490-1168
Cow position: chr14:25783492-25784170 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 402
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 172, 181

Conread position: 495-1026
Cow position: chr14:25794693-25794161 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 309
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 154, 141

Conread position: 495-1152
Cow position: chr14:25783329-25783986 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 176

Conread position: 495-1153
Cow position: chr14:25784001-25784659 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 394
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 170, 176

Conread position: 495-1156
Cow position: chr14:25836116-25836777 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 376
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 178, 171

Conread position: 499-1131
Cow position: chr14:25795193-25794561 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 377
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 153, 146

Conread position: 500-1178
Cow position: chr14:25876225-25876903 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 414
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 81

Conread position: 505-1187
Cow position: chr14:25860019-25860701 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 412
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 172, 182

Conread position: 511-1144
Cow position: chr14:25784101-25784734 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 383
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 134, 128

Conread position: 515-900
Cow position: chr14:25794589-25794201 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 239
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 147, 172

Conread position: 515-925
Cow position: chr14:3155414-3155824 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 248
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 390, 397

Conread position: 515-1125
Cow position: chr14:25795009-25794399 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 363
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 147, 155

Conread position: 515-1136
Cow position: chr14:25783937-25784559 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 385
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 166

Conread position: 515-1139
Cow position: chr14:25795093-25794469 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 365
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 162, 172

Conread position: 515-1178
Cow position: chr14:25895035-25895698 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 393
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 136

Conread position: 519-1137
Cow position: chr14:3101243-3100630 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 377
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 163, 156

Conread position: 519-1187
Cow position: chr14:447514-448182 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 387
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 561, 539

Conread position: 519-1187
Cow position: chr14:3061732-3061064 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 374
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 462, 468

Conread position: 521-1025
Cow position: chr14:3127759-3127255 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 305
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 45

Conread position: 521-1111
Cow position: chr14:680654-681244 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 51

Conread position: 521-1187
Cow position: chr14:3080751-3080085 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 36

Conread position: 524-1178
Cow position: chr14:680489-681143 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 549

Conread position: 527-1180
Cow position: chr14:3100986-3100335 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 383
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 102

Conread position: 527-1183
Cow position: chr14:25895467-25896126 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 377
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 146, 140

Conread position: 535-1137
Cow position: chr14:25895559-25896161 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 340
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 41

Conread position: 536-1181
Cow position: chr14:3128164-3127519 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 21

Conread position: 571-1164
Cow position: chr14:25783909-25784502 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 365
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 74, 66

Conread position: 574-1178
Cow position: chr14:3155878-3156482 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 358
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 103, 113

Conread position: 575-1096
Cow position: chr14:3155963-3156484 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 321
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 102, 112

Conread position: 575-1132
Cow position: chr14:25836112-25836669 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 329
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 97

Conread position: 575-1132
Cow position: chr14:25859417-25859974 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 331
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 104, 112

Conread position: 575-1136
Cow position: chr14:25877140-25877702 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 345
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 112

Conread position: 575-1142
Cow position: chr14:25795453-25794886 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 340
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 106

Conread position: 575-1168
Cow position: chr14:3080277-3079684 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 92

Conread position: 575-1190
Cow position: chr14:680372-680987 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 365
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 40, 46

Conread position: 579-1197
Cow position: chr14:3061588-3060969 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 348
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 409, 396

Conread position: 596-1131
Cow position: chr14:25836049-25836584 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 308
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 75

Conread position: 620-1132
Cow position: chr14:25895476-25895988 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 297
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 278, 290

Conread position: 620-1187
Cow position: chr14:3080820-3080253 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 322
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 460, 453

Conread position: 663-1144
Cow position: chr14:25910737-25911213 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 282
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 7

Conread position: 671-1146
Cow position: chr14:25859851-25860325 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 296
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 7

Conread position: 671-1155
Cow position: chr14:25860271-25860754 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 290
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 226, 7

Conread position: 677-1177
Cow position: chr14:3155327-3155824 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 305
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 309, 43

Conread position: 678-1103
Cow position: chr14:3155410-3155834 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 683-1110
Cow position: chr14:3101414-3100991 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 257
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 40

Conread position: 683-1160
Cow position: chr14:25836052-25836529 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 277
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 242, 235

Conread position: 683-1168
Cow position: chr14:3155903-3156388 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 302
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 303, 295

Conread position: 695-1194
Cow position: chr14:25876336-25876836 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 298
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 94

Conread position: 701-1192
Cow position: chr14:3080823-3080332 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 292
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 327, 318

Conread position: 704-1178
Cow position: chr14:680333-680807 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 302
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 50

Conread position: 733-1181
Cow position: chr14:25783315-25783763 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 268
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 160, 175

Conread position: 748-1154
Cow position: chr14:3155884-3156291 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 257
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 332, 325

Conread position: 764-1137
Cow position: chr14:3061151-3060778 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 208, 223

Conread position: 827-1199
Cow position: chr14:3080865-3080493 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 224
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 253, 246

Conread position: 844-1178
Cow position: chr14:3155407-3155741 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 209
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 68

Show alignments to all cow chromosomes.