Cow genome map
| Conread name: | Ss1.1-Mus1-POSM0100011_B06F.5 |
| Conread position: | 372-1056 |
| Cow position: | chr24:17078233-17077549 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 299 |
| Conread position: | 425-858 |
| Cow position: | chr24:17077845-17077413 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 430-1137 |
| Cow position: | chr24:17078259-17077552 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 126 |
| Conread position: | 439-1178 |
| Cow position: | chr24:17036367-17035628 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 440-1178 |
| Cow position: | chr24:17036114-17035376 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 451-850 |
| Cow position: | chr24:17077902-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 204, 220 |
| Conread position: | 451-1192 |
| Cow position: | chr24:17036523-17035782 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 98 |
| Conread position: | 452-897 |
| Cow position: | chr24:17035430-17034985 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 97 |
| Conread position: | 452-929 |
| Cow position: | chr24:17070567-17071044 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 105 |
| Conread position: | 452-1031 |
| Cow position: | chr24:17070483-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 355 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 110, 104 |
| Conread position: | 452-1118 |
| Cow position: | chr24:17078069-17077405 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 403 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 225, 234 |
| Conread position: | 472-1181 |
| Cow position: | chr24:17036418-17035709 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 149 |
| Conread position: | 476-1123 |
| Cow position: | chr24:17035574-17034928 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 391 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 476-1178 |
| Cow position: | chr24:17035826-17035124 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 412 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 186, 204 |
| Conread position: | 495-1168 |
| Cow position: | chr24:17078278-17077605 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 195 |
| Conread position: | 498-1168 |
| Cow position: | chr24:17036140-17035470 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 400 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 179, 192 |
| Conread position: | 515-1178 |
| Cow position: | chr24:17035955-17035292 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 402 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 131, 124 |
| Conread position: | 561-1178 |
| Cow position: | chr24:17070424-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 370 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 101, 110 |
| Conread position: | 574-1178 |
| Cow position: | chr24:17036148-17035544 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 113 |
| Conread position: | 574-1179 |
| Cow position: | chr24:17078283-17077678 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 400 |
| Conread position: | 619-926 |
| Cow position: | chr24:17013187-17013494 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 670-1004 |
| Cow position: | chr24:17013154-17013488 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 254, 244 |
| Conread position: | 683-1178 |
| Cow position: | chr24:17036543-17036048 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 249, 235 |
| Conread position: | 752-1106 |
| Cow position: | chr24:17013153-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 777-1164 |
| Cow position: | chr24:17070388-17070775 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 300, 296 |
Show alignments to all cow chromosomes.