Cow genome map
| Conread name: | Ss1.1-Mus1-POSM0100011_B06F.5 |
| Conread position: | 430-1048 |
| Cow position: | chr28:34695914-34696532 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 369 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 440-931 |
| Cow position: | chr28:34696092-34696583 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 213, 218 |
| Conread position: | 449-1094 |
| Cow position: | chr28:7757689-7758334 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 386 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 97 |
| Conread position: | 451-1140 |
| Cow position: | chr28:7757523-7758213 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 211 |
| Conread position: | 452-926 |
| Cow position: | chr28:9253127-9253601 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 210, 220 |
| Conread position: | 452-1109 |
| Cow position: | chr28:7757440-7758097 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 74 |
| Conread position: | 452-1117 |
| Cow position: | chr28:7810288-7810944 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 396 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 90, 97 |
| Conread position: | 452-1178 |
| Cow position: | chr28:7757608-7758334 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 430 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 210, 219 |
| Conread position: | 476-1029 |
| Cow position: | chr28:9290136-9290683 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 71 |
| Conread position: | 488-1117 |
| Cow position: | chr28:11333825-11333196 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 365 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 184, 178 |
| Conread position: | 490-1030 |
| Cow position: | chr28:9253081-9253622 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 331 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 172, 182 |
| Conread position: | 495-1018 |
| Cow position: | chr28:11333902-11333385 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 182, 195 |
| Conread position: | 495-1096 |
| Cow position: | chr28:11334070-11333469 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 361 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 495-1181 |
| Cow position: | chr28:7758071-7758741 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 377 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 587, 243 |
| Conread position: | 498-1110 |
| Cow position: | chr28:7758158-7758754 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 351 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 543, 165 |
| Conread position: | 514-1095 |
| Cow position: | chr28:9253022-9253602 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 10 |
| Conread position: | 514-1186 |
| Cow position: | chr28:34695831-34696505 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 386 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 168, 9 |
| Conread position: | 515-1106 |
| Cow position: | chr28:9298570-9299157 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 349 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 519-1181 |
| Cow position: | chr28:9252776-9253436 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 392 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 143, 107 |
| Conread position: | 524-1138 |
| Cow position: | chr28:7757428-7758042 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 554, 549 |
| Conread position: | 574-1178 |
| Cow position: | chr28:9252997-9253601 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 98 |
| Conread position: | 574-1187 |
| Cow position: | chr28:9252912-9253526 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 367 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 575-1137 |
| Cow position: | chr28:9290151-9290707 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 330, 57 |
| Conread position: | 577-1137 |
| Cow position: | chr28:7757397-7757957 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 115 |
| Conread position: | 596-1179 |
| Cow position: | chr28:34695996-34696579 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 334 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 657-1181 |
| Cow position: | chr28:7757231-7757749 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 681-1048 |
| Cow position: | chr28:33210229-33210597 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 197, 203 |
| Conread position: | 689-1137 |
| Cow position: | chr28:34673364-34673812 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 41 |
| Conread position: | 748-1110 |
| Cow position: | chr28:9290072-9290429 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 748-1125 |
| Cow position: | chr28:11334069-11333692 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 186, 180 |
| Conread position: | 763-1187 |
| Cow position: | chr28:7757415-7757839 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 764-1133 |
| Cow position: | chr28:33210228-33210598 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 221, 214 |
| Conread position: | 767-1131 |
| Cow position: | chr28:34673358-34673722 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 142 |
| Conread position: | 771-1106 |
| Cow position: | chr28:9299228-9299563 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 220, 200 |
| Conread position: | 844-1178 |
| Cow position: | chr28:33210223-33210558 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 273 |
Show alignments to all cow chromosomes.