Cow genome map
| Conread name: | Ss1.1-OvF2-UMC-p2mm4-014-f04.3 |
| Conread position: | 1-222 |
| Cow position: | chr10:8996223-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-299 |
| Cow position: | chr10:9031366-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-391 |
| Cow position: | chr10:21939211-21938821 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-444 |
| Cow position: | chr10:8996643-8996201 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 0 |
| Conread position: | 1-445 |
| Cow position: | chr10:8996895-8996452 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 0 |
| Conread position: | 1-459 |
| Cow position: | chr10:8996727-8996270 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 0 |
| Conread position: | 1-489 |
| Cow position: | chr10:8996559-8996073 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 464, 395 |
| Conread position: | 1-505 |
| Cow position: | chr10:8996811-8996311 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 0 |
| Conread position: | 2-371 |
| Cow position: | chr10:8996390-8996021 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-306 |
| Cow position: | chr10:8996293-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-424 |
| Cow position: | chr10:9010521-9010117 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 374, 0 |
| Conread position: | 20-391 |
| Cow position: | chr10:9010352-9009981 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 262, 257 |
| Conread position: | 25-396 |
| Cow position: | chr10:21939020-21938650 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 5, 273 |
| Conread position: | 29-330 |
| Cow position: | chr10:9031310-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-369 |
| Cow position: | chr10:9010175-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-437 |
| Cow position: | chr10:9010259-9009852 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 0 |
| Conread position: | 29-448 |
| Cow position: | chr10:21939099-21938683 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 31-391 |
| Cow position: | chr10:9031228-9031588 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 41-340 |
| Cow position: | chr10:9010415-9010116 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 48-452 |
| Cow position: | chr10:9010574-9010173 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 150, 11 |
| Conread position: | 66-291 |
| Cow position: | chr10:9031664-9031890 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 73-445 |
| Cow position: | chr10:21939223-21938852 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 204, 209 |
| Conread position: | 74-451 |
| Cow position: | chr10:9031187-9031563 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 318, 0 |
| Conread position: | 128-340 |
| Cow position: | chr10:9010580-9010368 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 154, 149 |
Show alignments to all cow chromosomes.