• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-OvF2-UMC-p2mm4-014-f04.3
        

               
Conread position:
               
1-162
               

               
Cow position:
               
chr18:51969872-51970033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr18:43168334-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:42837310-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:40075481-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr18:1418376-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:14453082-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr18:51839019-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr18:42674611-42674373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:43168250-43168498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:40324174-40323920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 175
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:43048606-43048351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:51367473-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 174
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:51812174-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:50048597-50048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:50083992-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:50246535-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:51839103-51838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:53586289-53585987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:56329141-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:42792598-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:50282048-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:50295562-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 192
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:50271835-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
176, 188
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:56247363-56247057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
222, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:50281964-50282275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
250, 280
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:51400906-51401220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr18:42837478-42837149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr18:55066736-55066407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr18:51751877-51751538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
197, 175
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr18:50099349-50099689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr18:51751961-51751617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
192, 197
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:56494134-56494484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
94, 105
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:43093128-43092779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
304, 0
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:50022452-50022098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 276
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr18:50022113-50021754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:14453898-14453541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
325, 320
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:44153832-44153487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr18:41948638-41948279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
268, 273
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr18:43022361-43021991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 335
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr18:52447986-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 265
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr18:53586373-53586003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
347, 342
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr18:51765960-51765589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
197, 191
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr18:44240467-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
328, 335
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr18:51812342-51811965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:40075229-40075608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:51765288-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
281, 265
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:40075061-40075444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
228, 217
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr18:55066820-55066432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 105
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr18:42724802-42724413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
101, 129
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr18:50058997-50058608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 101
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr18:51969629-51970009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:53635586-53635196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:55497584-55497194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:56128579-56128969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:56316087-56316477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 102
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:56316255-56316645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
242, 235
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:56316339-56316729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
329, 336
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:49022518-49022909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
268, 78
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr18:50271751-50272145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
257, 272
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:50083824-50084225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
94, 102
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr18:53559712-53560129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:40075145-40075567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
317, 304
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:49022852-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:50083320-50083742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:56329393-56328971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 0
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:56329645-56329223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 0
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:33065068-33064644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
389, 0
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:42791254-42791678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:49032840-49032416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 335
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:51969379-51969801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:54979598-54980022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr18:50083488-50083920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
95, 89
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr18:50059501-50059067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
259, 273
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr18:51765708-51765274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr18:56316171-56316605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr18:42792262-42792697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 188
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr18:50848373-50848808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:42693674-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
253, 267
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:51812930-51812490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:53635922-53635482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:42744679-42744238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:50295226-50295667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
251, 267
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:51765372-51764931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
252, 261
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:51765624-51765183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:51789771-51789330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 355
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr18:53610429-53609987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
365, 354
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:33064396-33063952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:50059249-50058805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:51874262-51874706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
196, 176
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:43167914-43168359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:55523766-55524211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
104, 89
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:41198033-41198482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:42744511-42744062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:42985186-42984737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 174
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44184428-44183979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 176
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44184848-44184399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:51400402-51400851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 277
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:51400570-51401019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:51752213-51751764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
192, 197
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52447146-52447595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
219, 213
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52447398-52447847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52447818-52448267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 265
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:56329981-56329532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:1417872-1418322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:42791758-42792208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
360, 352
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:49032588-49032138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 355
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:50848961-50849411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:51400738-51401188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 196
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:52447566-52448016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:53509444-53509894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
92, 113
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:53586709-53586259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
174, 187
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:56329477-56329027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 272
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:56329729-56329279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 0
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:56330149-56329699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 265
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr18:53636006-53635555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
392, 0
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:42694094-42693639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr18:50848793-50849247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 272
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:41948806-41948349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 273
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:42791002-42791459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
394, 0
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:53586793-53586336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:55523849-55524307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 187
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:56329309-56328852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 0
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr18:42837898-42837438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 184
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:42791842-42792321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:41197865-41198345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr18:41949226-41948741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr18:56247775-56247298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 272
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:40324927-40324444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
192, 52
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:41949142-41948656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 391
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:42675031-42674545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 265
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:42744343-42743857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 176
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:42792094-42792580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 364
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:43167998-43168484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 394
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:44398401-44397915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 0
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr18:1418040-1418527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
135, 129
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr18:44154416-44153927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 339
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr18:51400486-51400973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 273
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr18:42792346-42792834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:43093548-43093056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 348
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:44398233-44397733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 395
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr18:41197781-41198282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 391
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:53525898-53526400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 113
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:53586625-53586123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 100
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:43093714-43093212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:56493882-56494385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr18:43119696-43119537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr18:42959597-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr18:42744090-42743837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 196
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr18:56494219-56494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr18:49032335-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
256, 268
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:44397812-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
96, 90
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr18:14453165-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 194
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr18:40324761-40324391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
157, 151
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr18:53498516-53498888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr18:44397896-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr18:50058828-50058442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 98
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr18:14453729-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
365, 352
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr18:40306712-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
106, 100
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr18:51367640-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 185
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr18:51752043-51751619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
320, 5
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr18:50059668-50059234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
327, 332
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr18:51789350-51788916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
392, 0
               

               
Conread position:
               
2-438
               

               
Cow position:
               
chr18:51812677-51812242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 0
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr18:51400320-51400758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 5
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr18:51789266-51788826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
394, 0
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr18:51812509-51812069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
394, 0
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr18:51812761-51812321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 264
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr18:51813012-51812573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 5
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr18:41198286-41198734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 0
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr18:50059416-50058960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
249, 265
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr18:55067071-55066615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr18:56329560-56329081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr18:41197698-41198183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 0
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr18:41949309-41948824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr18:43093871-43093398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 139
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr18:51789602-51789116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 335
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr18:41198118-41198610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 0
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr18:40324509-40324010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 174
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr18:42675198-42674698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 335
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr18:43093295-43092796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 0
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:54993276-54993727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
5-436
               

               
Cow position:
               
chr18:51839267-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr18:42827699-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
187, 192
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr18:51789094-51788722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr18:51839434-51839004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
285, 269
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr18:50083576-50084012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 98
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr18:41198543-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr18:51838742-51838496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
7-390
               

               
Cow position:
               
chr18:50281885-50282269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
7-451
               

               
Cow position:
               
chr18:50271672-50272116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr18:42827533-42827896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr18:43168173-43168536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-442
               

               
Cow position:
               
chr18:50059578-50059145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
255, 273
               

               
Conread position:
               
8-451
               

               
Cow position:
               
chr18:44254094-44253656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
274, 196
               

               
Conread position:
               
9-397
               

               
Cow position:
               
chr18:50048755-50048368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
9-424
               

               
Cow position:
               
chr18:53610509-53610091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 388
               

               
Conread position:
               
9-451
               

               
Cow position:
               
chr18:43023111-43022668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 191
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr18:53509622-53509962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:53526076-53526422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
11-371
               

               
Cow position:
               
chr18:40075323-40075683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-467
               

               
Cow position:
               
chr18:49021615-49022069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr18:56128417-56128835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 348
               

               
Conread position:
               
13-255
               

               
Cow position:
               
chr18:56129011-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
152, 121
               

               
Conread position:
               
14-489
               

               
Cow position:
               
chr18:44240228-44240701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
175, 164
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr18:44253097-44252873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
205, 171
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr18:43048508-43048270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
206, 188
               

               
Conread position:
               
15-327
               

               
Cow position:
               
chr18:43119767-43119455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-339
               

               
Cow position:
               
chr18:53635320-53634996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
308, 285
               

               
Conread position:
               
15-372
               

               
Cow position:
               
chr18:51874031-51874381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
316, 128
               

               
Conread position:
               
15-433
               

               
Cow position:
               
chr18:54993544-54993959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
15-443
               

               
Cow position:
               
chr18:53509291-53509717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
15-443
               

               
Cow position:
               
chr18:53525745-53526171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
325, 11
               

               
Conread position:
               
15-451
               

               
Cow position:
               
chr18:43175556-43175121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
377, 0
               

               
Conread position:
               
15-488
               

               
Cow position:
               
chr18:40306305-40306776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
15-508
               

               
Cow position:
               
chr18:54992956-54993445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
328, 336
               

               
Conread position:
               
16-372
               

               
Cow position:
               
chr18:56128846-56129201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
313, 282
               

               
Conread position:
               
17-413
               

               
Cow position:
               
chr18:54993210-54993605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
17-426
               

               
Cow position:
               
chr18:40074993-40075401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
129, 120
               

               
Conread position:
               
18-331
               

               
Cow position:
               
chr18:53509713-53510024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
271, 0
               

               
Conread position:
               
18-339
               

               
Cow position:
               
chr18:53526167-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
234, 240
               

               
Conread position:
               
18-390
               

               
Cow position:
               
chr18:50059148-50058776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
311, 317
               

               
Conread position:
               
18-424
               

               
Cow position:
               
chr18:52012304-52011899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 325
               

               
Conread position:
               
18-430
               

               
Cow position:
               
chr18:52012052-52011641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr18:40085880-40085643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr18:54966923-54967235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
192, 182
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr18:54979448-54979760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
19-341
               

               
Cow position:
               
chr18:42960075-42959753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
233, 253
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chr18:55497650-55497246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
19-426
               

               
Cow position:
               
chr18:40086631-40086220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
19-430
               

               
Cow position:
               
chr18:53636072-53635662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
373, 0
               

               
Conread position:
               
19-434
               

               
Cow position:
               
chr18:53586859-53586445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
19-438
               

               
Cow position:
               
chr18:50848727-50849145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
19-458
               

               
Cow position:
               
chr18:56434437-56434874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
19-459
               

               
Cow position:
               
chr18:1417974-1418413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 195
               

               
Conread position:
               
19-488
               

               
Cow position:
               
chr18:53559814-53560281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
19-489
               

               
Cow position:
               
chr18:51368546-51368078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
235, 254
               

               
Conread position:
               
19-506
               

               
Cow position:
               
chr18:49022618-49023101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
19-508
               

               
Cow position:
               
chr18:54992708-54993193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
20-325
               

               
Cow position:
               
chr18:50251224-50251529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
20-352
               

               
Cow position:
               
chr18:14453795-14453463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-370
               

               
Cow position:
               
chr18:50099620-50099970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
20-372
               

               
Cow position:
               
chr18:50099956-50100308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
20-389
               

               
Cow position:
               
chr18:42724279-42723910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
20-390
               

               
Cow position:
               
chr18:42960158-42959788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 165
               

               
Conread position:
               
20-413
               

               
Cow position:
               
chr18:50246218-50246610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
20-424
               

               
Cow position:
               
chr18:50246050-50246453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
20-425
               

               
Cow position:
               
chr18:49022787-49023191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
376, 0
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr18:40086207-40085810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
155, 165
               

               
Conread position:
               
20-443
               

               
Cow position:
               
chr18:53498026-53498454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
270, 375
               

               
Conread position:
               
20-444
               

               
Cow position:
               
chr18:42985251-42984828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 154
               

               
Conread position:
               
20-451
               

               
Cow position:
               
chr18:42984915-42984485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 0
               

               
Conread position:
               
20-451
               

               
Cow position:
               
chr18:43120014-43119584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 168
               

               
Conread position:
               
20-452
               

               
Cow position:
               
chr18:53509547-53509978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
20-452
               

               
Cow position:
               
chr18:53586522-53586091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
20-488
               

               
Cow position:
               
chr18:53559899-53560365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
262, 251
               

               
Conread position:
               
20-506
               

               
Cow position:
               
chr18:55523617-55524099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
370, 0
               

               
Conread position:
               
21-437
               

               
Cow position:
               
chr18:42791694-42792109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
23-218
               

               
Cow position:
               
chr18:40307153-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
23-424
               

               
Cow position:
               
chr18:53635816-53635416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 0
               

               
Conread position:
               
24-249
               

               
Cow position:
               
chr18:42674672-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-256
               

               
Cow position:
               
chr18:50021664-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-312
               

               
Cow position:
               
chr18:33063869-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
168, 163
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr18:1418315-1418609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-319
               

               
Cow position:
               
chr18:33092793-33092498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-334
               

               
Cow position:
               
chr18:40085959-40085647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
24-351
               

               
Cow position:
               
chr18:56248180-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr18:50295501-50295849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
225, 243
               

               
Conread position:
               
24-380
               

               
Cow position:
               
chr18:50246474-50246830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
24-384
               

               
Cow position:
               
chr18:49032481-49032121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-390
               

               
Cow position:
               
chr18:40324319-40323953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
24-390
               

               
Cow position:
               
chr18:44154054-44153695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
305, 73
               

               
Conread position:
               
24-425
               

               
Cow position:
               
chr18:42837539-42837139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
24-425
               

               
Cow position:
               
chr18:56247930-56247520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
24-428
               

               
Cow position:
               
chr18:33092961-33092558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 152
               

               
Conread position:
               
24-433
               

               
Cow position:
               
chr18:56247503-56247102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
24-438
               

               
Cow position:
               
chr18:33064541-33064128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 0
               

               
Conread position:
               
24-442
               

               
Cow position:
               
chr18:52012130-52011713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
165, 154
               

               
Conread position:
               
24-443
               

               
Cow position:
               
chr18:54967849-54968265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
24-445
               

               
Cow position:
               
chr18:43022422-43022002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 0
               

               
Conread position:
               
24-452
               

               
Cow position:
               
chr18:49033321-49032894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 0
               

               
Conread position:
               
24-458
               

               
Cow position:
               
chr18:55017773-55018206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
24-459
               

               
Cow position:
               
chr18:53587106-53586672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
24-489
               

               
Cow position:
               
chr18:42837959-42837496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 174
               

               
Conread position:
               
24-489
               

               
Cow position:
               
chr18:52427610-52428073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
224, 247
               

               
Conread position:
               
24-489
               

               
Cow position:
               
chr18:52432959-52433422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
224, 247
               

               
Conread position:
               
24-507
               

               
Cow position:
               
chr18:40074916-40075395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 103
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr18:43022169-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-328
               

               
Cow position:
               
chr18:43174790-43174488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 129
               

               
Conread position:
               
25-404
               

               
Cow position:
               
chr18:53610070-53609692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 169
               

               
Conread position:
               
25-421
               

               
Cow position:
               
chr18:50099288-50099685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
25-424
               

               
Cow position:
               
chr18:56128350-56128749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
5, 372
               

               
Conread position:
               
25-425
               

               
Cow position:
               
chr18:56128770-56129169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 363
               

               
Conread position:
               
25-431
               

               
Cow position:
               
chr18:44184908-44184503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 0
               

               
Conread position:
               
25-443
               

               
Cow position:
               
chr18:54993134-54993551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
235, 247
               

               
Conread position:
               
25-451
               

               
Cow position:
               
chr18:44240071-44240496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 144
               

               
Conread position:
               
25-451
               

               
Cow position:
               
chr18:44240323-44240748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 312
               

               
Conread position:
               
25-451
               

               
Cow position:
               
chr18:44240407-44240832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
25-451
               

               
Cow position:
               
chr18:52447254-52447679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
25-459
               

               
Cow position:
               
chr18:53635395-53634962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 381
               

               
Conread position:
               
25-459
               

               
Cow position:
               
chr18:55523454-55523887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
186, 180
               

               
Conread position:
               
25-489
               

               
Cow position:
               
chr18:42959985-42959532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 158
               

               
Conread position:
               
25-505
               

               
Cow position:
               
chr18:43022757-43022281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 249
               

               
Conread position:
               
26-255
               

               
Cow position:
               
chr18:51969813-51970042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
172, 160
               

               
Conread position:
               
26-451
               

               
Cow position:
               
chr18:51368287-51367863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
26-489
               

               
Cow position:
               
chr18:43022504-43022043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 0
               

               
Conread position:
               
26-505
               

               
Cow position:
               
chr18:41949369-41948894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 231
               

               
Conread position:
               
27-390
               

               
Cow position:
               
chr18:51752103-51751740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 121
               

               
Conread position:
               
27-391
               

               
Cow position:
               
chr18:51969321-51969683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
288, 0
               

               
Conread position:
               
27-489
               

               
Cow position:
               
chr18:41948948-41948488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 171
               

               
Conread position:
               
28-299
               

               
Cow position:
               
chr18:54967352-54967623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-319
               

               
Cow position:
               
chr18:51969740-51970022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
28-327
               

               
Cow position:
               
chr18:51765849-51765550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
170, 154
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr18:54968103-54968423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
226, 238
               

               
Conread position:
               
28-349
               

               
Cow position:
               
chr18:55008960-55009281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
162, 167
               

               
Conread position:
               
28-378
               

               
Cow position:
               
chr18:42744148-42743798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-378
               

               
Cow position:
               
chr18:51400849-51401199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
164, 170
               

               
Conread position:
               
28-380
               

               
Cow position:
               
chr18:54967937-54968287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
310, 94
               

               
Conread position:
               
28-380
               

               
Cow position:
               
chr18:54968187-54968539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
245, 230
               

               
Conread position:
               
28-380
               

               
Cow position:
               
chr18:54979877-54980229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
226, 234
               

               
Conread position:
               
28-380
               

               
Cow position:
               
chr18:55008876-55009228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
28-380
               

               
Cow position:
               
chr18:55018197-55018549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
161, 150
               

               
Conread position:
               
28-383
               

               
Cow position:
               
chr18:54980129-54980484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-384
               

               
Cow position:
               
chr18:22634789-22635145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
28-394
               

               
Cow position:
               
chr18:54980297-54980662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
226, 239
               

               
Conread position:
               
28-413
               

               
Cow position:
               
chr18:54993473-54993857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:33064033-33063638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 159
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:56330206-56329811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 150
               

               
Conread position:
               
28-430
               

               
Cow position:
               
chr18:51789408-51789007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
368, 0
               

               
Conread position:
               
28-430
               

               
Cow position:
               
chr18:55018449-55018852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
285, 0
               

               
Conread position:
               
28-437
               

               
Cow position:
               
chr18:50099040-50099447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr18:51752270-51751856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 161
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr18:56434110-56434525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
28-446
               

               
Cow position:
               
chr18:42837619-42837202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
28-451
               

               
Cow position:
               
chr18:44253826-44253404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 170
               

               
Conread position:
               
28-451
               

               
Cow position:
               
chr18:50271526-50271948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
28-451
               

               
Cow position:
               
chr18:53587018-53586596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
28-451
               

               
Cow position:
               
chr18:54979961-54980383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
224, 234
               

               
Conread position:
               
28-451
               

               
Cow position:
               
chr18:54992885-54993307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
161, 154
               

               
Conread position:
               
28-458
               

               
Cow position:
               
chr18:56434194-56434623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
28-460
               

               
Cow position:
               
chr18:40324651-40324220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 306
               

               
Conread position:
               
28-489
               

               
Cow position:
               
chr18:51368201-51367743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 177
               

               
Conread position:
               
28-508
               

               
Cow position:
               
chr18:55018281-55018758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
28-508
               

               
Cow position:
               
chr18:56434362-56434837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
218, 239
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr18:44240663-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-219
               

               
Cow position:
               
chr18:50246647-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr18:44184148-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr18:43053393-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-280
               

               
Cow position:
               
chr18:51874458-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
223, 236
               

               
Conread position:
               
29-299
               

               
Cow position:
               
chr18:42984738-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr18:52428707-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 243
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr18:52433888-52434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
237, 243
               

               
Conread position:
               
29-318
               

               
Cow position:
               
chr18:55066624-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
154, 146
               

               
Conread position:
               
29-319
               

               
Cow position:
               
chr18:55524046-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
29-330
               

               
Cow position:
               
chr18:42960233-42959932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
162, 169
               

               
Conread position:
               
29-330
               

               
Cow position:
               
chr18:43119837-43119536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-330
               

               
Cow position:
               
chr18:53560496-53560793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
208, 192
               

               
Conread position:
               
29-339
               

               
Cow position:
               
chr18:40324230-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
283, 0
               

               
Conread position:
               
29-339
               

               
Cow position:
               
chr18:50030749-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
29-340
               

               
Cow position:
               
chr18:50048653-50048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
148, 134
               

               
Conread position:
               
29-341
               

               
Cow position:
               
chr18:50099713-50100025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr18:50099545-50099859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
29-347
               

               
Cow position:
               
chr18:42791114-42791432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
29-352
               

               
Cow position:
               
chr18:14453222-14452899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-352
               

               
Cow position:
               
chr18:44253657-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
29-352
               

               
Cow position:
               
chr18:51812230-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
221, 229
               

               
Conread position:
               
29-353
               

               
Cow position:
               
chr18:50849157-50849481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-357
               

               
Cow position:
               
chr18:42959738-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-362
               

               
Cow position:
               
chr18:56247417-56247089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
29-369
               

               
Cow position:
               
chr18:43048662-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 152
               

               
Conread position:
               
29-371
               

               
Cow position:
               
chr18:42984822-42984480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 133
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr18:44239823-44240166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 147
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr18:51789155-51788812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr18:52428539-52428882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 241
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr18:52428623-52428966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr18:52433720-52434063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
224, 241
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr18:52433804-52434147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
29-373
               

               
Cow position:
               
chr18:50083936-50084280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 248
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr18:42792542-42792893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr18:49022964-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
300, 305
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr18:54967269-54967620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr18:55497388-55497037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 87
               

               
Conread position:
               
29-381
               

               
Cow position:
               
chr18:56391197-56390845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
151, 160
               

               
Conread position:
               
29-384
               

               
Cow position:
               
chr18:55523962-55524317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
29-385
               

               
Cow position:
               
chr18:1418236-1418592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr18:33064116-33063755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 327
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr18:33092872-33092511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr18:43119921-43119560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr18:43174870-43174509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr18:51812398-51812037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-391
               

               
Cow position:
               
chr18:56330037-56329675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-393
               

               
Cow position:
               
chr18:33063948-33063584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-402
               

               
Cow position:
               
chr18:42693310-42692938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
220, 84
               

               
Conread position:
               
29-404
               

               
Cow position:
               
chr18:42674751-42674377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
29-413
               

               
Cow position:
               
chr18:33093040-33092657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-421
               

               
Cow position:
               
chr18:49033148-49032757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 0
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr18:52011957-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
161, 147
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:42724522-42724128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:42792038-42792432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:42985494-42985100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 245
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:49022378-49022770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:50022253-50021856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
183, 325
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:50030919-50030520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
119, 240
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:50245975-50246369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:52012377-52011983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 149
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:56316619-56317013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
308, 303
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr18:33064704-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 316
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr18:43120257-43119862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:42985326-42984930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:43022585-43022189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 149
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:44239907-44240303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:51368116-51367721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 0
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr18:52012209-52011812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
29-429
               

               
Cow position:
               
chr18:40306235-40306634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-429
               

               
Cow position:
               
chr18:43022837-43022438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
29-429
               

               
Cow position:
               
chr18:44239991-44240390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
29-433
               

               
Cow position:
               
chr18:50281824-50282227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
29-434
               

               
Cow position:
               
chr18:40086030-40085633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
29-434
               

               
Cow position:
               
chr18:50099881-50100286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
29-434
               

               
Cow position:
               
chr18:50250984-50251385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
29-436
               

               
Cow position:
               
chr18:42790946-42791352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
225, 243
               

               
Conread position:
               
29-436
               

               
Cow position:
               
chr18:56128103-56128509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
247, 253
               

               
Conread position:
               
29-437
               

               
Cow position:
               
chr18:42791534-42791941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
29-437
               

               
Cow position:
               
chr18:49033232-49032825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 240
               

               
Conread position:
               
29-437
               

               
Cow position:
               
chr18:50848653-50849060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
161, 169
               

               
Conread position:
               
29-438
               

               
Cow position:
               
chr18:49022712-49023120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 210
               

               
Conread position:
               
29-438
               

               
Cow position:
               
chr18:50271611-50272018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
29-440
               

               
Cow position:
               
chr18:43174954-43174544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:33064452-33064040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 159
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:41948694-41948284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 0
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:50059053-50058641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
229, 245
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:50848485-50848897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 243
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:51400682-51401094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:51765512-51765100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
182, 174
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:51789659-51789247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:56128271-56128683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
364, 0
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:22634706-22635119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:42693730-42693317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
223, 239
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:51367697-51367284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:51969089-51969484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
256, 149
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:54979794-54980207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:54992802-54993215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
231, 243
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:55008709-55009122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:55008793-55009206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:55017862-55018275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
364, 0
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:55018114-55018527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
223, 243
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr18:55018366-55018780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr18:42791954-42792368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 243
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr18:44153888-44153486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
326, 220
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr18:51367864-51367451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
164, 55
               

               
Conread position:
               
29-444
               

               
Cow position:
               
chr18:51766016-51765602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
29-446
               

               
Cow position:
               
chr18:43167858-43168274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
104, 88
               

               
Conread position:
               
29-446
               

               
Cow position:
               
chr18:53610149-53609733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
29-447
               

               
Cow position:
               
chr18:50271443-50271860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
149, 160
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:33064788-33064367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:42675255-42674834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 316
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:42837786-42837365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 233
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:42985074-42984653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 237
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:43120173-43119752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 169
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:43175038-43174617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 381
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:43175290-43174869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 308
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:50021830-50021406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 143
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:50048989-50048568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:51367781-51367360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
253, 249
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:52428287-52428708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:52428371-52428792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 237
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:52428455-52428876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 237
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:52433468-52433889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:52433552-52433973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 237
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:52433636-52434057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 237
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:54967017-54967438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
259, 217
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:56128691-56129112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:56329785-56329364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:42693898-42693476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 148
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:44184484-44184062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 243
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:49032644-49032222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 364
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:49032728-49032306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:53560328-53560750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:53635642-53635220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
94, 87
               

               
Conread position:
               
29-452
               

               
Cow position:
               
chr18:56494078-56494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-453
               

               
Cow position:
               
chr18:53498377-53498797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
220, 72
               

               
Conread position:
               
29-457
               

               
Cow position:
               
chr18:14453954-14453527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
270, 255
               

               
Conread position:
               
29-457
               

               
Cow position:
               
chr18:40306655-40307082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 0
               

               
Conread position:
               
29-458
               

               
Cow position:
               
chr18:44184652-44184224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
399, 363
               

               
Conread position:
               
29-458
               

               
Cow position:
               
chr18:51874206-51874634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-458
               

               
Cow position:
               
chr18:54967185-54967613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
29-459
               

               
Cow position:
               
chr18:41197641-41198070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 240
               

               
Conread position:
               
29-459
               

               
Cow position:
               
chr18:41198229-41198658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-459
               

               
Cow position:
               
chr18:42791198-42791625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
298, 291
               

               
Conread position:
               
29-459
               

               
Cow position:
               
chr18:42984990-42984561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-459
               

               
Cow position:
               
chr18:55523374-55523803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
146, 160
               

               
Conread position:
               
29-460
               

               
Cow position:
               
chr18:42674835-42674407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
29-460
               

               
Cow position:
               
chr18:50246395-50246823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
29-460
               

               
Cow position:
               
chr18:53560160-53560590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
29-472
               

               
Cow position:
               
chr18:41198397-41198839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 363
               

               
Conread position:
               
29-482
               

               
Cow position:
               
chr18:52447930-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 368
               

               
Conread position:
               
29-488
               

               
Cow position:
               
chr18:53559992-53560449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:33064284-33063826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 238
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:40086532-40086076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
242, 231
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:42675423-42674965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 314
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:42744399-42743941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:42744567-42744109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 233
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:43093928-43093482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
361, 202
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:43120089-43119631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:43175374-43174916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 241
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:44184736-44184278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
224, 244
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52427783-52428241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
225, 245
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52427867-52428325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52428035-52428493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52428119-52428577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52433048-52433506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52433216-52433674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52433300-52433758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52447342-52447800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:52447678-52448136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-490
               

               
Cow position:
               
chr18:40306823-40307282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 364
               

               
Conread position:
               
29-490
               

               
Cow position:
               
chr18:51812818-51812359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
29-490
               

               
Cow position:
               
chr18:53635474-53635016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
29-495
               

               
Cow position:
               
chr18:43175122-43174658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
300, 308
               

               
Conread position:
               
29-498
               

               
Cow position:
               
chr18:41197557-41198022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-498
               

               
Cow position:
               
chr18:43093604-43093139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr18:44398037-44397564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 303
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr18:49033064-49032591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 307
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr18:50083684-50084157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 160
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr18:50083768-50084241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr18:55017946-55018419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
29-507
               

               
Cow position:
               
chr18:54979542-54980016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
164, 156
               

               
Conread position:
               
29-508
               

               
Cow position:
               
chr18:43167774-43168249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
29-508
               

               
Cow position:
               
chr18:52447510-52447985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
29-541
               

               
Cow position:
               
chr18:52427699-52428205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
409, 361
               

               
Conread position:
               
30-429
               

               
Cow position:
               
chr18:14454037-14453639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
30-443
               

               
Cow position:
               
chr18:55008544-55008954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
30-451
               

               
Cow position:
               
chr18:42985577-42985157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 237
               

               
Conread position:
               
30-451
               

               
Cow position:
               
chr18:52427532-52427952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
168, 163
               

               
Conread position:
               
30-541
               

               
Cow position:
               
chr18:52432881-52433386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
168, 163
               

               
Conread position:
               
31-327
               

               
Cow position:
               
chr18:44153562-44153268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
246, 0
               

               
Conread position:
               
31-420
               

               
Cow position:
               
chr18:42960315-42959927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
307, 322
               

               
Conread position:
               
31-430
               

               
Cow position:
               
chr18:51400264-51400662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
31-431
               

               
Cow position:
               
chr18:44154470-44154068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 365
               

               
Conread position:
               
31-445
               

               
Cow position:
               
chr18:43120339-43119926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 152
               

               
Conread position:
               
31-452
               

               
Cow position:
               
chr18:44253164-44252755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
31-488
               

               
Cow position:
               
chr18:33065122-33064667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
32-343
               

               
Cow position:
               
chr18:43175698-43175396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
219, 105
               

               
Conread position:
               
32-442
               

               
Cow position:
               
chr18:42693811-42693402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
306, 302
               

               
Conread position:
               
32-451
               

               
Cow position:
               
chr18:54967773-54968189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
220, 230
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr18:56247827-56247530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr18:52011869-52011571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
234, 241
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chr18:56316539-56316929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
222, 216
               

               
Conread position:
               
33-452
               

               
Cow position:
               
chr18:44398453-44398035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr18:40307080-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
242, 232
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr18:22634879-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr18:40306576-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
34-437
               

               
Cow position:
               
chr18:43048741-43048339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
34-451
               

               
Cow position:
               
chr18:52446927-52447343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
159, 164
               

               
Conread position:
               
34-489
               

               
Cow position:
               
chr18:51368363-51367910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
431, 359
               

               
Conread position:
               
34-498
               

               
Cow position:
               
chr18:40324813-40324353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 0
               

               
Conread position:
               
35-252
               

               
Cow position:
               
chr18:44153641-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
35-255
               

               
Cow position:
               
chr18:51766093-51765873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr18:51873689-51874012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
35-380
               

               
Cow position:
               
chr18:40306997-40307342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
241, 232
               

               
Conread position:
               
35-391
               

               
Cow position:
               
chr18:56316457-56316813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
35-394
               

               
Cow position:
               
chr18:42694146-42693785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 233
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr18:51752346-51751940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
216, 18
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr18:51789904-51789453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
219, 19
               

               
Conread position:
               
35-506
               

               
Cow position:
               
chr18:33093118-33092650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
36-312
               

               
Cow position:
               
chr18:50099469-50099744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
37-444
               

               
Cow position:
               
chr18:51839487-51839081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 161
               

               
Conread position:
               
37-447
               

               
Cow position:
               
chr18:50048813-50048404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
37-488
               

               
Cow position:
               
chr18:42744727-42744278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 144
               

               
Conread position:
               
37-489
               

               
Cow position:
               
chr18:43094004-43093566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
146, 141
               

               
Conread position:
               
38-453
               

               
Cow position:
               
chr18:53610224-53609810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
38-457
               

               
Cow position:
               
chr18:53635717-53635299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
328, 317
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr18:55524140-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-390
               

               
Cow position:
               
chr18:51765418-51765067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
41-255
               

               
Cow position:
               
chr18:51969018-51969231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
41-340
               

               
Cow position:
               
chr18:55497460-55497161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr18:50049145-50048843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
41-345
               

               
Cow position:
               
chr18:51788891-51788589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr18:53497966-53498300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
41-380
               

               
Cow position:
               
chr18:53560424-53560763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr18:50246323-50246705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
41-425
               

               
Cow position:
               
chr18:54967698-54968079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
41-443
               

               
Cow position:
               
chr18:54980058-54980459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
355, 0
               

               
Conread position:
               
41-443
               

               
Cow position:
               
chr18:54993402-54993803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
348, 0
               

               
Conread position:
               
41-443
               

               
Cow position:
               
chr18:55067116-55066715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
41-444
               

               
Cow position:
               
chr18:56329857-56329455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
352, 0
               

               
Conread position:
               
41-451
               

               
Cow position:
               
chr18:50848329-50848738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
318, 325
               

               
Conread position:
               
41-451
               

               
Cow position:
               
chr18:54967533-54967939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 143
               

               
Conread position:
               
41-459
               

               
Cow position:
               
chr18:14453294-14452877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 122
               

               
Conread position:
               
41-488
               

               
Cow position:
               
chr18:40306499-40306944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
44-430
               

               
Cow position:
               
chr18:56248239-56247862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
44-435
               

               
Cow position:
               
chr18:56493841-56494231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
44-451
               

               
Cow position:
               
chr18:33064941-33064535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 309
               

               
Conread position:
               
45-451
               

               
Cow position:
               
chr18:42675491-42675086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
45-457
               

               
Cow position:
               
chr18:56316047-56316458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
228, 215
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr18:51838786-51838490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
47-436
               

               
Cow position:
               
chr18:56315965-56316353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
349, 0
               

               
Conread position:
               
47-451
               

               
Cow position:
               
chr18:43167624-43168027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 72
               

               
Conread position:
               
49-459
               

               
Cow position:
               
chr18:50083284-50083693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chr18:49033379-49033038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
53-311
               

               
Cow position:
               
chr18:49022319-49022576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
53-498
               

               
Cow position:
               
chr18:51813046-51812605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
199, 214
               

               
Conread position:
               
55-457
               

               
Cow position:
               
chr18:40306176-40306578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
5, 339
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr18:41197508-41197895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 272
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr18:53610534-53610147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
65-424
               

               
Cow position:
               
chr18:53636110-53635752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
331, 0
               

               
Conread position:
               
65-424
               

               
Cow position:
               
chr18:56128055-56128413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
65-429
               

               
Cow position:
               
chr18:51839543-51839180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
217, 192
               

               
Conread position:
               
65-459
               

               
Cow position:
               
chr18:43175590-43175197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
331, 0
               

               
Conread position:
               
67-313
               

               
Cow position:
               
chr18:43053439-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
71-391
               

               
Cow position:
               
chr18:50083222-50083542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
71-392
               

               
Cow position:
               
chr18:50295380-50295701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
71-452
               

               
Cow position:
               
chr18:50098999-50099379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
359, 324
               

               
Conread position:
               
79-437
               

               
Cow position:
               
chr18:50059675-50059318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
333, 315
               

               
Conread position:
               
86-390
               

               
Cow position:
               
chr18:43053507-43053200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
86-391
               

               
Cow position:
               
chr18:52012486-52012183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 40
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr18:44184924-44184567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
198, 167
               

               
Conread position:
               
97-426
               

               
Cow position:
               
chr18:40086970-40086645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
97-451
               

               
Cow position:
               
chr18:44154488-44154132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 243
               

               
Conread position:
               
104-370
               

               
Cow position:
               
chr18:50021668-50021402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
150, 163
               

               
Conread position:
               
104-390
               

               
Cow position:
               
chr18:52446913-52447199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-451
               

               
Cow position:
               
chr18:42837963-42837617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
288, 0
               

               
Conread position:
               
112-488
               

               
Cow position:
               
chr18:42790945-42791319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
169, 153
               

               
Conread position:
               
113-459
               

               
Cow position:
               
chr18:50059725-50059380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
207, 217
               

               
Conread position:
               
118-380
               

               
Cow position:
               
chr18:56267473-56267211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-489
               

               
Cow position:
               
chr18:42827394-42827760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
125-443
               

               
Cow position:
               
chr18:51969335-51969650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
212, 207
               

               
Conread position:
               
125-452
               

               
Cow position:
               
chr18:53509232-53509558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr18:53525686-53526064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
131-391
               

               
Cow position:
               
chr18:42724588-42724328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
140-489
               

               
Cow position:
               
chr18:41197500-41197847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 129
               

               
Conread position:
               
142-391
               

               
Cow position:
               
chr18:55497695-55497446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-424
               

               
Cow position:
               
chr18:53636117-53635836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
142-430
               

               
Cow position:
               
chr18:56128048-56128335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
145-423
               

               
Cow position:
               
chr18:55523322-55523599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
149-442
               

               
Cow position:
               
chr18:50281692-50281984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
190-458
               

               
Cow position:
               
chr18:44398464-44398197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
193-424
               

               
Cow position:
               
chr18:56267482-56267252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
169, 160
               

               
Conread position:
               
195-424
               

               
Cow position:
               
chr18:52012461-52012235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
198-372
               

               
Cow position:
               
chr18:44239740-44239914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
208-489
               

               
Cow position:
               
chr18:14453295-14453016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
182, 200
               

               
Conread position:
               
208-506
               

               
Cow position:
               
chr18:53509231-53509525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
208-506
               

               
Cow position:
               
chr18:53525685-53525979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
181, 0
               
Show alignments to all cow chromosomes.