Cow genome map
| Conread name: | Ss1.1-OvF2-UMC-p2mm4-014-f04.3 |
| Conread position: | 1-185 |
| Cow position: | chr24:16986465-16986649 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-220 |
| Cow position: | chr24:17077722-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-319 |
| Cow position: | chr24:17013199-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 113, 100 |
| Conread position: | 1-372 |
| Cow position: | chr24:17070662-17071033 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 336 |
| Conread position: | 1-380 |
| Cow position: | chr24:17077890-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-427 |
| Cow position: | chr24:17078058-17077633 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 0 |
| Conread position: | 1-430 |
| Cow position: | chr24:17035671-17035243 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 0 |
| Conread position: | 1-442 |
| Cow position: | chr24:17070578-17071018 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 0 |
| Conread position: | 1-444 |
| Cow position: | chr24:17035839-17035397 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 0 |
| Conread position: | 1-444 |
| Cow position: | chr24:17036091-17035649 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 262 |
| Conread position: | 1-489 |
| Cow position: | chr24:17036343-17035857 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 0 |
| Conread position: | 2-299 |
| Cow position: | chr24:17077805-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 270, 264 |
| Conread position: | 2-322 |
| Cow position: | chr24:17070747-17071067 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-371 |
| Cow position: | chr24:17035334-17034965 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-380 |
| Cow position: | chr24:17035754-17035376 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-424 |
| Cow position: | chr24:17036258-17035837 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 2-445 |
| Cow position: | chr24:17077973-17077531 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 275 |
| Conread position: | 2-459 |
| Cow position: | chr24:17035502-17035046 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 267 |
| Conread position: | 2-506 |
| Cow position: | chr24:17036006-17035506 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 175 |
| Conread position: | 2-506 |
| Cow position: | chr24:17036426-17035926 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 14-430 |
| Cow position: | chr24:17036579-17036167 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 381, 30 |
| Conread position: | 15-429 |
| Cow position: | chr24:17035573-17035160 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 0 |
| Conread position: | 15-451 |
| Cow position: | chr24:17036497-17036062 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 306 |
| Conread position: | 20-445 |
| Cow position: | chr24:17070513-17070937 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 0 |
| Conread position: | 24-442 |
| Cow position: | chr24:17078119-17077702 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 253 |
| Conread position: | 26-489 |
| Cow position: | chr24:17070350-17070812 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 29-444 |
| Cow position: | chr24:17078282-17077868 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 253, 240 |
| Conread position: | 29-451 |
| Cow position: | chr24:17070438-17070859 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 371 |
| Conread position: | 29-506 |
| Cow position: | chr24:17036147-17035674 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 316 |
| Conread position: | 32-275 |
| Cow position: | chr24:16986412-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 143, 148 |
| Conread position: | 33-370 |
| Cow position: | chr24:17013147-17013484 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 65-451 |
| Cow position: | chr24:17036612-17036230 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 129-358 |
| Cow position: | chr24:16986425-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-443 |
| Cow position: | chr24:17013162-17013472 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 264, 0 |
| Conread position: | 201-459 |
| Cow position: | chr24:17013147-17013404 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 195, 0 |
Show alignments to all cow chromosomes.